RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 CCDC191Q8NCU4 936 aa22.47■■□□□ 1.19
USP49-202ENST00000373010 GDPD2Q9HCC8 539 aa22.47■■□□□ 1.19
USP49-202ENST00000373010 RRAGDQ9NQL2 400 aaPredicted RBP22.47■■□□□ 1.19
USP49-202ENST00000373010 TMEM63CQ9P1W3 806 aa22.47■■□□□ 1.19
USP49-202ENST00000373010 SMC3Q9UQE7 1217 aa22.47■■□□□ 1.19
USP49-202ENST00000373010 TCHHQ07283 1943 aa22.46■■□□□ 1.19
USP49-202ENST00000373010 ZNF594Q96JF6 807 aaPredicted RBP22.46■■□□□ 1.19
USP49-202ENST00000373010 ASAP1Q9ULH1 1129 aa22.46■■□□□ 1.19
USP49-202ENST00000373010 TAF5LO75529 589 aa22.45■■□□□ 1.18
USP49-202ENST00000373010 DDX46Q7L014 1031 aaKnown RBP22.45■■□□□ 1.18
USP49-202ENST00000373010 NEUROD6Q96NK8 337 aa22.45■■□□□ 1.18
USP49-202ENST00000373010 HAUS7Q99871 368 aa22.45■■□□□ 1.18
USP49-202ENST00000373010 BTG4Q9NY30 223 aa22.45■■□□□ 1.18
USP49-202ENST00000373010 SYT1P21579 422 aa22.45■■□□□ 1.18
USP49-202ENST00000373010 ST3GAL1Q11201 340 aa22.45■■□□□ 1.18
USP49-202ENST00000373010 ME3Q16798 604 aa22.45■■□□□ 1.18
USP49-202ENST00000373010 PIGBQ92521 554 aa22.45■■□□□ 1.18
USP49-202ENST00000373010 JCADQ9P266 1359 aa22.44■■□□□ 1.18
USP49-202ENST00000373010 LRRC24Q50LG9 513 aa22.44■■□□□ 1.18
USP49-202ENST00000373010 CCDC129Q6ZRS4 1044 aa22.44■■□□□ 1.18
USP49-202ENST00000373010 DNAJC10Q8IXB1 793 aa22.44■■□□□ 1.18
USP49-202ENST00000373010 ZSCAN31Q96LW9 406 aaPredicted RBP22.44■■□□□ 1.18
USP49-202ENST00000373010 TCEANC2Q96MN5 208 aa22.44■■□□□ 1.18
USP49-202ENST00000373010 ZNF609O15014 1411 aa22.43■■□□□ 1.18
USP49-202ENST00000373010 STX6O43752 255 aa22.43■■□□□ 1.18
USP49-202ENST00000373010 NASPP49321 788 aaPredicted RBP22.43■■□□□ 1.18
USP49-202ENST00000373010 TIMM10P62072 90 aa22.43■■□□□ 1.18
USP49-202ENST00000373010 NECAB1Q8N987 351 aa22.43■■□□□ 1.18
USP49-202ENST00000373010 SEC62Q99442 399 aaKnown RBP22.43■■□□□ 1.18
USP49-202ENST00000373010 TPCN1Q9ULQ1 816 aa22.43■■□□□ 1.18
USP49-202ENST00000373010 ZSCAN22P10073 491 aaPredicted RBP22.43■■□□□ 1.18
USP49-202ENST00000373010 PSMA5P28066 241 aa22.43■■□□□ 1.18
USP49-202ENST00000373010 RNF20Q5VTR2 975 aa22.43■■□□□ 1.18
USP49-202ENST00000373010 MBD3O95983 291 aa22.42■■□□□ 1.18
USP49-202ENST00000373010 GJB2P29033 226 aa22.42■■□□□ 1.18
USP49-202ENST00000373010 ISCA1Q9BUE6 129 aa22.42■■□□□ 1.18
USP49-202ENST00000373010 SH2B1Q9NRF2 756 aaPredicted RBP22.42■■□□□ 1.18
USP49-202ENST00000373010 GADD45BO75293 160 aaPredicted RBP22.42■■□□□ 1.18
USP49-202ENST00000373010 PRIM1P49642 420 aaKnown RBP22.42■■□□□ 1.18
USP49-202ENST00000373010 BLOC1S2Q6QNY1 142 aa22.41■■□□□ 1.18
USP49-202ENST00000373010 USP48Q86UV5 1035 aa22.41■■□□□ 1.18
USP49-202ENST00000373010 PUS3Q9BZE2 481 aaKnown RBP22.41■■□□□ 1.18
USP49-202ENST00000373010 EYA2O00167 538 aa22.41■■□□□ 1.18
USP49-202ENST00000373010 IL15P40933 162 aaPredicted RBP22.41■■□□□ 1.18
USP49-202ENST00000373010 TCIRG1Q13488 830 aa22.41■■□□□ 1.18
USP49-202ENST00000373010 SYCE3A1L190 88 aa22.4■■□□□ 1.18
USP49-202ENST00000373010 RBSNQ9H1K0 784 aa22.4■■□□□ 1.18
USP49-202ENST00000373010 ATG3Q9NT62 314 aa22.4■■□□□ 1.18
USP49-202ENST00000373010 CNPY2Q9Y2B0 182 aa22.4■■□□□ 1.18
USP49-202ENST00000373010 ITGB4P16144 1822 aa22.4■■□□□ 1.18
USP49-202ENST00000373010 RPS6KB1P23443 525 aa22.39■■□□□ 1.18
USP49-202ENST00000373010 SLFNL1Q499Z3 407 aa22.39■■□□□ 1.18
USP49-202ENST00000373010 USPL1Q5W0Q7 1092 aa22.39■■□□□ 1.18
USP49-202ENST00000373010 RFX7Q2KHR2 1363 aa22.39■■□□□ 1.18
USP49-202ENST00000373010 KAT6BQ8WYB5 2073 aa22.39■■□□□ 1.17
USP49-202ENST00000373010 GOLIM4O00461 696 aa22.39■■□□□ 1.17
USP49-202ENST00000373010 KBTBD3Q8NAB2 608 aa22.39■■□□□ 1.17
USP49-202ENST00000373010 HMG20BQ9P0W2 317 aa22.39■■□□□ 1.17
USP49-202ENST00000373010 F13A1P00488 732 aa22.38■■□□□ 1.17
USP49-202ENST00000373010 MCMDC2Q4G0Z9 681 aa22.38■■□□□ 1.17
USP49-202ENST00000373010 GPR108Q9NPR9 543 aa22.38■■□□□ 1.17
USP49-202ENST00000373010 CCDC85AQ96PX6 553 aaPredicted RBP22.38■■□□□ 1.17
USP49-202ENST00000373010 PAG1Q9NWQ8 432 aa22.38■■□□□ 1.17
USP49-202ENST00000373010 TSGA10IPQ3SY00 556 aa22.37■■□□□ 1.17
USP49-202ENST00000373010 TOB2Q14106 344 aaPredicted RBP22.37■■□□□ 1.17
USP49-202ENST00000373010 LRSAM1Q6UWE0 723 aa22.37■■□□□ 1.17
USP49-202ENST00000373010 KIF6Q6ZMV9 814 aa22.37■■□□□ 1.17
USP49-202ENST00000373010 FAM89AQ96GI7 184 aa22.37■■□□□ 1.17
USP49-202ENST00000373010 A0A1B0GUL7 405 aa22.36■■□□□ 1.17
USP49-202ENST00000373010 VSIG10Q8N0Z9 540 aa22.36■■□□□ 1.17
USP49-202ENST00000373010 TEX13AQ9BXU3 409 aaPredicted RBP22.36■■□□□ 1.17
USP49-202ENST00000373010 MTMR6Q9Y217 621 aa22.36■■□□□ 1.17
USP49-202ENST00000373010 CIAO1O76071 339 aa22.36■■□□□ 1.17
USP49-202ENST00000373010 STARD3NLO95772 234 aa22.35■■□□□ 1.17
USP49-202ENST00000373010 CCDC57Q2TAC2 916 aa22.35■■□□□ 1.17
USP49-202ENST00000373010 TPRNQ4KMQ1 711 aa22.35■■□□□ 1.17
USP49-202ENST00000373010 TMEM87AQ8NBN3 555 aa22.35■■□□□ 1.17
USP49-202ENST00000373010 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.35■■□□□ 1.17
USP49-202ENST00000373010 U3KPZ7 1027 aaPredicted RBP22.35■■□□□ 1.17
USP49-202ENST00000373010 PALLDQ8WX93 1383 aa22.34■■□□□ 1.17
USP49-202ENST00000373010 TRIM28Q13263 835 aaKnown RBP22.34■■□□□ 1.17
USP49-202ENST00000373010 ANKRD1Q15327 319 aa22.34■■□□□ 1.17
USP49-202ENST00000373010 SYNE4Q8N205 404 aa22.34■■□□□ 1.17
USP49-202ENST00000373010 ALDH8A1Q9H2A2 487 aaPredicted RBP22.34■■□□□ 1.17
USP49-202ENST00000373010 SH3TC1Q8TE82 1336 aa22.34■■□□□ 1.17
USP49-202ENST00000373010 DISP2A7MBM2 1401 aa22.34■■□□□ 1.17
USP49-202ENST00000373010 VPS37CA5D8V6 355 aaPredicted RBP22.33■■□□□ 1.17
USP49-202ENST00000373010 CYP21A2P08686 494 aa22.33■■□□□ 1.17
USP49-202ENST00000373010 CCDC173Q0VFZ6 552 aa22.33■■□□□ 1.17
USP49-202ENST00000373010 SLC4A9Q96Q91 983 aa22.33■■□□□ 1.17
USP49-202ENST00000373010 CEP126Q9P2H0 1117 aa22.33■■□□□ 1.17
USP49-202ENST00000373010 PCCAP05165 728 aaPredicted RBP22.33■■□□□ 1.17
USP49-202ENST00000373010 IFIT1P09914 478 aaKnown RBP22.33■■□□□ 1.17
USP49-202ENST00000373010 HLFQ16534 295 aa22.33■■□□□ 1.17
USP49-202ENST00000373010 STK3Q13188 491 aa22.32■■□□□ 1.16
USP49-202ENST00000373010 KRT32Q14532 448 aa22.32■■□□□ 1.16
USP49-202ENST00000373010 TRIM44Q96DX7 344 aaPredicted RBP22.32■■□□□ 1.16
USP49-202ENST00000373010 NEK1Q96PY6 1258 aa22.32■■□□□ 1.16
USP49-202ENST00000373010 PPP1R9BQ96SB3 815 aa22.32■■□□□ 1.16
USP49-202ENST00000373010 FIBPO43427 364 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms