RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 TNRQ92752 1358 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 WTAPQ15007 396 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 TRMT1LQ7Z2T5 733 aaKnown RBP11.34□□□□□ -0.59
TRERF1-204ENST00000372922 ZNF804AQ7Z570 1209 aa11.34□□□□□ -0.59
TRERF1-204ENST00000372922 GJB2P29033 226 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 MNAT1P51948 309 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 CNNM2Q9H8M5 875 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 EXOC1Q9NV70 894 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 FANCAO15360 1455 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 CHRNA2Q15822 529 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 RNF187Q5TA31 235 aaPredicted RBP11.33□□□□□ -0.6
TRERF1-204ENST00000372922 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 DHX29Q7Z478 1369 aaKnown RBP11.33□□□□□ -0.6
TRERF1-204ENST00000372922 NEMFO60524 1076 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 IFI16Q16666 785 aaKnown RBP11.33□□□□□ -0.6
TRERF1-204ENST00000372922 NPHP3Q7Z494 1330 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 ABCA10Q8WWZ4 1543 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 GNAQP50148 359 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 GSDMDP57764 484 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 SLC4A8Q2Y0W8 1093 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 TBC1D5Q92609 795 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 STX8Q9UNK0 236 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 SARNPP82979 210 aaKnown RBP11.33□□□□□ -0.6
TRERF1-204ENST00000372922 SMC1AQ14683 1233 aaKnown RBP11.33□□□□□ -0.6
TRERF1-204ENST00000372922 IFIT1BQ5T764 474 aaKnown RBP11.33□□□□□ -0.6
TRERF1-204ENST00000372922 VTI1AQ96AJ9 217 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 ANKRD36BQ8N2N9 1353 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 URI1O94763 535 aaPredicted RBP11.33□□□□□ -0.6
TRERF1-204ENST00000372922 BMP15O95972 392 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 CYP7A1P22680 504 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 HAND2P61296 217 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 CPLX3Q8WVH0 158 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 HOMER2Q9NSB8 354 aa11.33□□□□□ -0.6
TRERF1-204ENST00000372922 UBAP1LF5GYI3 381 aa11.32□□□□□ -0.6
TRERF1-204ENST00000372922 TSNARE1Q96NA8 513 aa11.32□□□□□ -0.6
TRERF1-204ENST00000372922 IL16Q14005 1332 aa11.32□□□□□ -0.6
TRERF1-204ENST00000372922 PLB1Q6P1J6 1458 aa11.32□□□□□ -0.6
TRERF1-204ENST00000372922 CA8P35219 290 aa11.32□□□□□ -0.6
TRERF1-204ENST00000372922 DNA2P51530 1060 aa11.32□□□□□ -0.6
TRERF1-204ENST00000372922 C16orf71Q8IYS4 520 aaPredicted RBP11.32□□□□□ -0.6
TRERF1-204ENST00000372922 ESR2Q92731 530 aa11.32□□□□□ -0.6
TRERF1-204ENST00000372922 SSX2IPQ9Y2D8 614 aa11.32□□□□□ -0.6
TRERF1-204ENST00000372922 ECM2O94769 699 aaPredicted RBP11.32□□□□□ -0.6
TRERF1-204ENST00000372922 ACTN2P35609 894 aa11.32□□□□□ -0.6
TRERF1-204ENST00000372922 C14orf93Q9H972 538 aaKnown RBP11.32□□□□□ -0.6
TRERF1-204ENST00000372922 NOP2P46087 812 aaKnown RBP11.32□□□□□ -0.6
TRERF1-204ENST00000372922 TRIM27P14373 513 aa11.32□□□□□ -0.6
TRERF1-204ENST00000372922 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
TRERF1-204ENST00000372922 TIGD1Q96MW7 591 aa11.31□□□□□ -0.6
TRERF1-204ENST00000372922 POLD1P28340 1107 aa11.31□□□□□ -0.6
TRERF1-204ENST00000372922 ZSCAN16Q9H4T2 348 aaPredicted RBP11.31□□□□□ -0.6
TRERF1-204ENST00000372922 LMAN1P49257 510 aa11.31□□□□□ -0.6
TRERF1-204ENST00000372922 GRIN2AQ12879 1464 aa11.31□□□□□ -0.6
TRERF1-204ENST00000372922 POTEB2H3BUK9 544 aa11.31□□□□□ -0.6
TRERF1-204ENST00000372922 DDX12PQ92771 950 aa11.31□□□□□ -0.6
TRERF1-204ENST00000372922 PAIP2Q9BPZ3 127 aaKnown RBP11.31□□□□□ -0.6
TRERF1-204ENST00000372922 SYNCQ9H7C4 482 aa11.31□□□□□ -0.6
TRERF1-204ENST00000372922 MBIPQ9NS73 344 aa11.31□□□□□ -0.6
TRERF1-204ENST00000372922 SLC4A4Q9Y6R1 1079 aa11.31□□□□□ -0.6
TRERF1-204ENST00000372922 ACSBG1Q96GR2 724 aa11.31□□□□□ -0.6
TRERF1-204ENST00000372922 GOLGA6L9A6NEM1 432 aa11.31□□□□□ -0.6
TRERF1-204ENST00000372922 MAP3K9P80192 1104 aa11.31□□□□□ -0.6
TRERF1-204ENST00000372922 NCBP1Q09161 790 aaKnown RBP11.3□□□□□ -0.6
TRERF1-204ENST00000372922 CCDC184Q52MB2 194 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 PRPF4BQ13523 1007 aaKnown RBP11.3□□□□□ -0.6
TRERF1-204ENST00000372922 ATP2B3Q16720 1220 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 NAA16Q6N069 864 aaPredicted RBP11.3□□□□□ -0.6
TRERF1-204ENST00000372922 FSD2A1L4K1 749 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 SPECC1Q5M775 1068 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 PLVAPQ9BX97 442 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 UBE4AQ14139 1066 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 DDB1Q16531 1140 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 ESPNB1AK53 854 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 ZBTB43O43298 467 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 KRT13P13646 458 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 PPM1EQ8WY54 764 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 PARP3Q9Y6F1 533 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 PHACTR2O75167 634 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 HLTFQ14527 1009 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRERF1-204ENST00000372922 ZSCAN30Q86W11 494 aa11.3□□□□□ -0.6
TRERF1-204ENST00000372922 TTC12Q9H892 705 aaPredicted RBP11.3□□□□□ -0.6
TRERF1-204ENST00000372922 FERP16591 822 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 NBPF14Q5TI25 921 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 CPSF2Q9P2I0 782 aaKnown RBP11.29□□□□□ -0.6
TRERF1-204ENST00000372922 F8W031 263 aaPredicted RBP11.29□□□□□ -0.6
TRERF1-204ENST00000372922 TRIM47Q96LD4 638 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 C8orf37Q96NL8 207 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 NIP7Q9Y221 180 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRERF1-204ENST00000372922 PLCG2P16885 1265 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 RTN1Q16799 776 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 TMC6Q7Z403 805 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 MICALCLQ6ZW33 695 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 SMARCC2Q8TAQ2 1214 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 BIN1O00499 593 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 CAVIN2O95810 425 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 STAT6P42226 847 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 EHBP1Q8NDI1 1231 aa11.29□□□□□ -0.6
TRERF1-204ENST00000372922 PICALMQ13492 652 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 XAGE3Q8WTP9 111 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms