RNA–Protein interactions for RNA: ENST00000372862.7

PABPC4-204, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5 BASIC

Gene PABPC4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-204ENST00000372862 L1TD1Q5T7N2 865 aaKnown RBP24.44■■□□□ 1.5
PABPC4-204ENST00000372862 DNAJC2Q99543 621 aaKnown RBP24.44■■□□□ 1.5
PABPC4-204ENST00000372862 NUP98P52948 1817 aa24.44■■□□□ 1.5
PABPC4-204ENST00000372862 AK2P54819 239 aa24.44■■□□□ 1.5
PABPC4-204ENST00000372862 LRRC24Q50LG9 513 aa24.44■■□□□ 1.5
PABPC4-204ENST00000372862 FAM89AQ96GI7 184 aa24.44■■□□□ 1.5
PABPC4-204ENST00000372862 CREB3L3Q68CJ9 461 aa24.43■■□□□ 1.5
PABPC4-204ENST00000372862 JAKMIP1Q96N16 626 aaKnown RBP24.43■■□□□ 1.5
PABPC4-204ENST00000372862 LIMCH1Q9UPQ0 1083 aa24.43■■□□□ 1.5
PABPC4-204ENST00000372862 ZDHHC9Q9Y397 364 aa24.43■■□□□ 1.5
PABPC4-204ENST00000372862 NWD2Q9ULI1 1742 aa24.43■■□□□ 1.5
PABPC4-204ENST00000372862 RNF20Q5VTR2 975 aa24.43■■□□□ 1.5
PABPC4-204ENST00000372862 ZBTB1Q9Y2K1 713 aa24.43■■□□□ 1.5
PABPC4-204ENST00000372862 ZNF609O15014 1411 aa24.42■■□□□ 1.5
PABPC4-204ENST00000372862 CDHR2Q9BYE9 1310 aa24.42■■□□□ 1.5
PABPC4-204ENST00000372862 HLFQ16534 295 aa24.42■■□□□ 1.5
PABPC4-204ENST00000372862 ZSWIM6Q9HCJ5 1215 aa24.42■■□□□ 1.5
PABPC4-204ENST00000372862 CYP46A1Q9Y6A2 500 aa24.42■■□□□ 1.5
PABPC4-204ENST00000372862 TIMM10P62072 90 aa24.42■■□□□ 1.5
PABPC4-204ENST00000372862 VPS53Q5VIR6 699 aa24.42■■□□□ 1.5
PABPC4-204ENST00000372862 CEP126Q9P2H0 1117 aa24.42■■□□□ 1.5
PABPC4-204ENST00000372862 MYH3P11055 1940 aa24.41■■□□□ 1.5
PABPC4-204ENST00000372862 IL6STP40189 918 aaPredicted RBP24.41■■□□□ 1.5
PABPC4-204ENST00000372862 MCTP1Q6DN14 999 aa24.41■■□□□ 1.5
PABPC4-204ENST00000372862 CSF1RP07333 972 aa24.41■■□□□ 1.5
PABPC4-204ENST00000372862 ADCK5Q3MIX3 580 aa24.41■■□□□ 1.5
PABPC4-204ENST00000372862 NLRP10Q86W26 655 aa24.41■■□□□ 1.5
PABPC4-204ENST00000372862 JCADQ9P266 1359 aa24.41■■□□□ 1.5
PABPC4-204ENST00000372862 TICAM2Q86XR7 235 aa24.4■■□□□ 1.5
PABPC4-204ENST00000372862 PDRG1Q9NUG6 133 aa24.4■■□□□ 1.5
PABPC4-204ENST00000372862 GOLGA6L3A6NEY3 463 aa24.4■■□□□ 1.5
PABPC4-204ENST00000372862 NUTM2BA6NNL0 878 aaPredicted RBP24.4■■□□□ 1.5
PABPC4-204ENST00000372862 NUTM2EB1AL46 878 aaPredicted RBP24.4■■□□□ 1.5
PABPC4-204ENST00000372862 ERVV-1B6SEH8 477 aa24.4■■□□□ 1.5
PABPC4-204ENST00000372862 IFIT5Q13325 482 aaKnown RBP24.4■■□□□ 1.5
PABPC4-204ENST00000372862 TAF7LQ5H9L4 462 aa24.4■■□□□ 1.5
PABPC4-204ENST00000372862 NUTM2AQ8IVF1 878 aaPredicted RBP24.4■■□□□ 1.5
PABPC4-204ENST00000372862 KBTBD3Q8NAB2 608 aa24.4■■□□□ 1.5
PABPC4-204ENST00000372862 PUS3Q9BZE2 481 aaKnown RBP24.4■■□□□ 1.5
PABPC4-204ENST00000372862 NDUFB9Q9Y6M9 179 aa24.4■■□□□ 1.5
PABPC4-204ENST00000372862 A0A1B0GUL7 405 aa24.39■■□□□ 1.5
PABPC4-204ENST00000372862 SLC27A2O14975 620 aa24.39■■□□□ 1.5
PABPC4-204ENST00000372862 GPTP24298 496 aa24.39■■□□□ 1.5
PABPC4-204ENST00000372862 PSMA5P28066 241 aa24.39■■□□□ 1.5
PABPC4-204ENST00000372862 RUFY3Q7L099 469 aa24.39■■□□□ 1.5
PABPC4-204ENST00000372862 CCDC9Q9Y3X0 531 aaKnown RBP24.39■■□□□ 1.5
PABPC4-204ENST00000372862 SPATA31A5Q5VU36 1347 aa24.39■■□□□ 1.49
PABPC4-204ENST00000372862 SPATA31A7Q8IWB4 1347 aa24.39■■□□□ 1.49
PABPC4-204ENST00000372862 TOM1O60784 492 aa24.39■■□□□ 1.49
PABPC4-204ENST00000372862 BRD1O95696 1058 aa24.39■■□□□ 1.49
PABPC4-204ENST00000372862 DDX46Q7L014 1031 aaKnown RBP24.39■■□□□ 1.49
PABPC4-204ENST00000372862 ZNF589Q86UQ0 364 aaPredicted RBP24.39■■□□□ 1.49
PABPC4-204ENST00000372862 HMG20BQ9P0W2 317 aa24.39■■□□□ 1.49
PABPC4-204ENST00000372862 AKAP2Q9Y2D5 859 aa24.39■■□□□ 1.49
PABPC4-204ENST00000372862 SPEF2Q9C093 1822 aa24.38■■□□□ 1.49
PABPC4-204ENST00000372862 TAF5LO75529 589 aa24.38■■□□□ 1.49
PABPC4-204ENST00000372862 PALLDQ8WX93 1383 aa24.38■■□□□ 1.49
PABPC4-204ENST00000372862 CPA1P15085 419 aa24.38■■□□□ 1.49
PABPC4-204ENST00000372862 DZIP3Q86Y13 1208 aaKnown RBP24.38■■□□□ 1.49
PABPC4-204ENST00000372862 PAG1Q9NWQ8 432 aa24.38■■□□□ 1.49
PABPC4-204ENST00000372862 MCMDC2Q4G0Z9 681 aa24.37■■□□□ 1.49
PABPC4-204ENST00000372862 ZSCAN31Q96LW9 406 aaPredicted RBP24.37■■□□□ 1.49
PABPC4-204ENST00000372862 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.37■■□□□ 1.49
PABPC4-204ENST00000372862 RPAP1Q9BWH6 1393 aaPredicted RBP24.37■■□□□ 1.49
PABPC4-204ENST00000372862 KLHL40Q2TBA0 621 aa24.37■■□□□ 1.49
PABPC4-204ENST00000372862 DDX49Q9Y6V7 483 aaKnown RBP24.37■■□□□ 1.49
PABPC4-204ENST00000372862 A0A0G2JS52 829 aa24.36■■□□□ 1.49
PABPC4-204ENST00000372862 FSD2A1L4K1 749 aa24.36■■□□□ 1.49
PABPC4-204ENST00000372862 IFIT1P09914 478 aaKnown RBP24.36■■□□□ 1.49
PABPC4-204ENST00000372862 PIP4K2BP78356 416 aa24.36■■□□□ 1.49
PABPC4-204ENST00000372862 BARGINQ6ZT62 677 aa24.36■■□□□ 1.49
PABPC4-204ENST00000372862 MARCH10Q8NA82 808 aaPredicted RBP24.36■■□□□ 1.49
PABPC4-204ENST00000372862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.36■■□□□ 1.49
PABPC4-204ENST00000372862 GOLIM4O00461 696 aa24.35■■□□□ 1.49
PABPC4-204ENST00000372862 CCDC85AQ96PX6 553 aaPredicted RBP24.35■■□□□ 1.49
PABPC4-204ENST00000372862 SH2B1Q9NRF2 756 aaPredicted RBP24.35■■□□□ 1.49
PABPC4-204ENST00000372862 ISY1Q9ULR0 285 aaKnown RBP24.35■■□□□ 1.49
PABPC4-204ENST00000372862 SLIT2O94813 1529 aa24.35■■□□□ 1.49
PABPC4-204ENST00000372862 TSGA10IPQ3SY00 556 aa24.35■■□□□ 1.49
PABPC4-204ENST00000372862 USPL1Q5W0Q7 1092 aa24.35■■□□□ 1.49
PABPC4-204ENST00000372862 TRMT112Q9UI30 125 aaKnown RBP24.35■■□□□ 1.49
PABPC4-204ENST00000372862 TBC1D2BQ9UPU7 963 aa24.35■■□□□ 1.49
PABPC4-204ENST00000372862 SH3TC1Q8TE82 1336 aa24.34■■□□□ 1.49
PABPC4-204ENST00000372862 TTLL11Q8NHH1 800 aa24.34■■□□□ 1.49
PABPC4-204ENST00000372862 ACSBG1Q96GR2 724 aa24.34■■□□□ 1.49
PABPC4-204ENST00000372862 LMBRD1Q9NUN5 540 aa24.34■■□□□ 1.49
PABPC4-204ENST00000372862 CCDC158Q5M9N0 1113 aa24.34■■□□□ 1.49
PABPC4-204ENST00000372862 IRS4O14654 1257 aaPredicted RBP24.33■■□□□ 1.49
PABPC4-204ENST00000372862 GORABQ5T7V8 394 aa24.33■■□□□ 1.49
PABPC4-204ENST00000372862 BLOC1S2Q6QNY1 142 aa24.33■■□□□ 1.49
PABPC4-204ENST00000372862 SYNE4Q8N205 404 aa24.33■■□□□ 1.49
PABPC4-204ENST00000372862 LARP6Q9BRS8 491 aaKnown RBP24.33■■□□□ 1.49
PABPC4-204ENST00000372862 WDR33Q9C0J8 1336 aaKnown RBP24.33■■□□□ 1.49
PABPC4-204ENST00000372862 ATP6V1AP38606 617 aa24.33■■□□□ 1.48
PABPC4-204ENST00000372862 CTSWP56202 376 aa24.33■■□□□ 1.48
PABPC4-204ENST00000372862 KRT32Q14532 448 aa24.33■■□□□ 1.48
PABPC4-204ENST00000372862 FOXD4L5Q5VV16 416 aaPredicted RBP24.33■■□□□ 1.48
PABPC4-204ENST00000372862 FOXD4L4Q8WXT5 416 aaPredicted RBP24.33■■□□□ 1.48
PABPC4-204ENST00000372862 HELLSQ9NRZ9 838 aa24.33■■□□□ 1.48
PABPC4-204ENST00000372862 CCDC87Q9NVE4 849 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms