RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 GLTPD2A6NH11 291 aa19.03■□□□□ 0.64
SNX21-203ENST00000372541 VEGFAP15692 232 aaPredicted RBP19.03■□□□□ 0.64
SNX21-203ENST00000372541 LMNB1P20700 586 aa19.03■□□□□ 0.64
SNX21-203ENST00000372541 RARSP54136 660 aaKnown RBP19.03■□□□□ 0.64
SNX21-203ENST00000372541 GCKRQ14397 625 aa19.03■□□□□ 0.64
SNX21-203ENST00000372541 BEND3Q5T5X7 828 aa19.03■□□□□ 0.64
SNX21-203ENST00000372541 SLC4A10Q6U841 1118 aa19.03■□□□□ 0.64
SNX21-203ENST00000372541 CRAMP1Q96RY5 1269 aa19.03■□□□□ 0.64
SNX21-203ENST00000372541 ABCC4O15439 1325 aa19.02■□□□□ 0.64
SNX21-203ENST00000372541 SLX4Q8IY92 1834 aa19.02■□□□□ 0.64
SNX21-203ENST00000372541 DDX46Q7L014 1031 aaKnown RBP19.02■□□□□ 0.64
SNX21-203ENST00000372541 UBE3BQ7Z3V4 1068 aa19.02■□□□□ 0.64
SNX21-203ENST00000372541 KIF16BQ96L93 1317 aa19.01■□□□□ 0.63
SNX21-203ENST00000372541 PPEF1O14829 653 aaPredicted RBP19.01■□□□□ 0.63
SNX21-203ENST00000372541 CAPN15O75808 1086 aa19.01■□□□□ 0.63
SNX21-203ENST00000372541 CCDC93Q567U6 631 aa19.01■□□□□ 0.63
SNX21-203ENST00000372541 JARID2Q92833 1246 aaPredicted RBP19.01■□□□□ 0.63
SNX21-203ENST00000372541 SRCIN1Q9C0H9 1055 aa19.01■□□□□ 0.63
SNX21-203ENST00000372541 PDE8AO60658 829 aa19■□□□□ 0.63
SNX21-203ENST00000372541 SF3B3Q15393 1217 aaKnown RBP19■□□□□ 0.63
SNX21-203ENST00000372541 C7orf43Q8WVR3 580 aa19■□□□□ 0.63
SNX21-203ENST00000372541 SBF1O95248 1867 aa18.99■□□□□ 0.63
SNX21-203ENST00000372541 H7C1W4 665 aa18.99■□□□□ 0.63
SNX21-203ENST00000372541 NFKBIEO00221 500 aa18.99■□□□□ 0.63
SNX21-203ENST00000372541 ALDH1L1O75891 902 aa18.99■□□□□ 0.63
SNX21-203ENST00000372541 BRPF1P55201 1214 aaPredicted RBP18.99■□□□□ 0.63
SNX21-203ENST00000372541 GRAPQ13588 217 aa18.99■□□□□ 0.63
SNX21-203ENST00000372541 GRAPLQ8TC17 118 aaPredicted RBP18.99■□□□□ 0.63
SNX21-203ENST00000372541 POTECB2RU33 542 aa18.98■□□□□ 0.63
SNX21-203ENST00000372541 HSPA1AP0DMV8 641 aaKnown RBP18.98■□□□□ 0.63
SNX21-203ENST00000372541 HSPA1BP0DMV9 641 aaKnown RBP18.98■□□□□ 0.63
SNX21-203ENST00000372541 CCDC152Q4G0S7 254 aa18.98■□□□□ 0.63
SNX21-203ENST00000372541 TMX4Q9H1E5 349 aaPredicted RBP18.98■□□□□ 0.63
SNX21-203ENST00000372541 TAOK3Q9H2K8 898 aa18.98■□□□□ 0.63
SNX21-203ENST00000372541 NOB1Q9ULX3 412 aaKnown RBP18.98■□□□□ 0.63
SNX21-203ENST00000372541 CTSWP56202 376 aa18.97■□□□□ 0.63
SNX21-203ENST00000372541 CC2D2BQ6DHV5 1058 aa18.97■□□□□ 0.63
SNX21-203ENST00000372541 OLFM4Q6UX06 510 aa18.97■□□□□ 0.63
SNX21-203ENST00000372541 RTKN2Q8IZC4 609 aa18.97■□□□□ 0.63
SNX21-203ENST00000372541 API5Q9BZZ5 524 aaKnown RBP18.97■□□□□ 0.63
SNX21-203ENST00000372541 LTBP3Q9NS15 1303 aa18.97■□□□□ 0.63
SNX21-203ENST00000372541 GRM8O00222 908 aa18.96■□□□□ 0.63
SNX21-203ENST00000372541 BBOX1O75936 387 aa18.96■□□□□ 0.63
SNX21-203ENST00000372541 TMC4Q7Z404 712 aa18.96■□□□□ 0.63
SNX21-203ENST00000372541 C9orf78Q9NZ63 289 aaPredicted RBP18.96■□□□□ 0.63
SNX21-203ENST00000372541 FER1L6Q2WGJ9 1857 aa18.95■□□□□ 0.62
SNX21-203ENST00000372541 CASP7P55210 303 aa18.95■□□□□ 0.62
SNX21-203ENST00000372541 GRIPAP1Q4V328 841 aa18.95■□□□□ 0.62
SNX21-203ENST00000372541 CCDC85AQ96PX6 553 aaPredicted RBP18.95■□□□□ 0.62
SNX21-203ENST00000372541 PLA2G12BQ9BX93 195 aa18.95■□□□□ 0.62
SNX21-203ENST00000372541 ATP6V0A2Q9Y487 856 aa18.95■□□□□ 0.62
SNX21-203ENST00000372541 BCAR3O75815 825 aa18.94■□□□□ 0.62
SNX21-203ENST00000372541 FKBP4Q02790 459 aaKnown RBP eCLIP18.94■□□□□ 0.62
SNX21-203ENST00000372541 ARHGAP45Q92619 1136 aa18.94■□□□□ 0.62
SNX21-203ENST00000372541 CELF1Q92879 486 aaKnown RBP18.94■□□□□ 0.62
SNX21-203ENST00000372541 SNED1Q8TER0 1413 aa18.93■□□□□ 0.62
SNX21-203ENST00000372541 IPO8O15397 1037 aaKnown RBP18.93■□□□□ 0.62
SNX21-203ENST00000372541 TTLL11Q8NHH1 800 aa18.93■□□□□ 0.62
SNX21-203ENST00000372541 FRAT1Q92837 279 aaPredicted RBP18.93■□□□□ 0.62
SNX21-203ENST00000372541 SEC31BQ9NQW1 1179 aa18.93■□□□□ 0.62
SNX21-203ENST00000372541 CCT4P50991 539 aaKnown RBP18.92■□□□□ 0.62
SNX21-203ENST00000372541 DPY19L2Q6NUT2 758 aa18.92■□□□□ 0.62
SNX21-203ENST00000372541 SLC51AQ86UW1 340 aa18.92■□□□□ 0.62
SNX21-203ENST00000372541 SP8Q8IXZ3 490 aa18.92■□□□□ 0.62
SNX21-203ENST00000372541 PSMD1Q99460 953 aa18.92■□□□□ 0.62
SNX21-203ENST00000372541 RTL9Q8NET4 1388 aa18.92■□□□□ 0.62
SNX21-203ENST00000372541 RPS8P62241 208 aaKnown RBP18.91■□□□□ 0.62
SNX21-203ENST00000372541 YTHDC1Q96MU7 727 aaKnown RBP18.91■□□□□ 0.62
SNX21-203ENST00000372541 CDC5LQ99459 802 aaKnown RBP18.91■□□□□ 0.62
SNX21-203ENST00000372541 GREM2Q9H772 168 aa18.91■□□□□ 0.62
SNX21-203ENST00000372541 MYH3P11055 1940 aa18.91■□□□□ 0.62
SNX21-203ENST00000372541 COL4A1P02462 1669 aa18.91■□□□□ 0.62
SNX21-203ENST00000372541 LRRC37AA6NMS7 1700 aa18.91■□□□□ 0.62
SNX21-203ENST00000372541 ATF7IPQ6VMQ6 1270 aa18.9■□□□□ 0.62
SNX21-203ENST00000372541 ANKRD18AQ8IVF6 992 aa18.9■□□□□ 0.62
SNX21-203ENST00000372541 ZNF277Q9NRM2 450 aaPredicted RBP18.9■□□□□ 0.62
SNX21-203ENST00000372541 TIAM2Q8IVF5 1701 aa18.9■□□□□ 0.62
SNX21-203ENST00000372541 UTYO14607 1347 aa18.9■□□□□ 0.62
SNX21-203ENST00000372541 NBPF7P0C2Y1 421 aaPredicted RBP18.89■□□□□ 0.61
SNX21-203ENST00000372541 FAM161AQ3B820 660 aa18.89■□□□□ 0.61
SNX21-203ENST00000372541 DPP8Q6V1X1 898 aaPredicted RBP18.89■□□□□ 0.61
SNX21-203ENST00000372541 TAF1P21675 1872 aa18.88■□□□□ 0.61
SNX21-203ENST00000372541 CSF1RP07333 972 aa18.88■□□□□ 0.61
SNX21-203ENST00000372541 TRIM27P14373 513 aa18.88■□□□□ 0.61
SNX21-203ENST00000372541 ITGA6P23229 1130 aa18.88■□□□□ 0.61
SNX21-203ENST00000372541 FOXO4P98177 505 aa18.88■□□□□ 0.61
SNX21-203ENST00000372541 ZKSCAN2Q63HK3 967 aa18.88■□□□□ 0.61
SNX21-203ENST00000372541 MPNDQ8N594 471 aa18.88■□□□□ 0.61
SNX21-203ENST00000372541 CHMP3Q9Y3E7 222 aa18.88■□□□□ 0.61
SNX21-203ENST00000372541 IARSP41252 1262 aaKnown RBP18.87■□□□□ 0.61
SNX21-203ENST00000372541 SUPT20HQ8NEM7 779 aa18.87■□□□□ 0.61
SNX21-203ENST00000372541 SUCLG2Q96I99 432 aa18.87■□□□□ 0.61
SNX21-203ENST00000372541 CREBZFQ9NS37 354 aa18.87■□□□□ 0.61
SNX21-203ENST00000372541 IGHMBP2P38935 993 aaKnown RBP18.86■□□□□ 0.61
SNX21-203ENST00000372541 CHADLQ6NUI6 762 aa18.86■□□□□ 0.61
SNX21-203ENST00000372541 LMBR1LQ6UX01 489 aa18.86■□□□□ 0.61
SNX21-203ENST00000372541 RTFDC1Q9BY42 306 aaPredicted RBP18.86■□□□□ 0.61
SNX21-203ENST00000372541 USP44Q9H0E7 712 aa18.86■□□□□ 0.61
SNX21-203ENST00000372541 ANKRD18BA2A2Z9 1011 aa18.85■□□□□ 0.61
SNX21-203ENST00000372541 IFIT5Q13325 482 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms