RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 PLA2G12BQ9BX93 195 aa20.53■□□□□ 0.88
TMEM53-203ENST00000372242 GNAI3P08754 354 aa20.52■□□□□ 0.88
TMEM53-203ENST00000372242 SF3B3Q15393 1217 aaKnown RBP20.52■□□□□ 0.88
TMEM53-203ENST00000372242 TTLL11Q8NHH1 800 aa20.52■□□□□ 0.88
TMEM53-203ENST00000372242 BICC1Q9H694 974 aaKnown RBP20.52■□□□□ 0.88
TMEM53-203ENST00000372242 MYH3P11055 1940 aa20.52■□□□□ 0.88
TMEM53-203ENST00000372242 MASTLQ96GX5 879 aa20.51■□□□□ 0.87
TMEM53-203ENST00000372242 LRRFIP2Q9Y608 721 aaKnown RBP20.51■□□□□ 0.87
TMEM53-203ENST00000372242 NPR1P16066 1061 aa20.5■□□□□ 0.87
TMEM53-203ENST00000372242 LMBR1LQ6UX01 489 aa20.5■□□□□ 0.87
TMEM53-203ENST00000372242 PDZRN3Q9UPQ7 1066 aa20.5■□□□□ 0.87
TMEM53-203ENST00000372242 DLEC1Q9Y238 1755 aa20.5■□□□□ 0.87
TMEM53-203ENST00000372242 TAF1P21675 1872 aa20.5■□□□□ 0.87
TMEM53-203ENST00000372242 GREM2Q9H772 168 aa20.5■□□□□ 0.87
TMEM53-203ENST00000372242 DDX19BQ9UMR2 479 aa20.5■□□□□ 0.87
TMEM53-203ENST00000372242 CCDC152Q4G0S7 254 aa20.49■□□□□ 0.87
TMEM53-203ENST00000372242 C1orf115Q9H7X2 142 aa20.49■□□□□ 0.87
TMEM53-203ENST00000372242 SEC31BQ9NQW1 1179 aa20.49■□□□□ 0.87
TMEM53-203ENST00000372242 CHMP3Q9Y3E7 222 aa20.49■□□□□ 0.87
TMEM53-203ENST00000372242 CSF1RP07333 972 aa20.48■□□□□ 0.87
TMEM53-203ENST00000372242 HOXA10P31260 410 aaPredicted RBP20.48■□□□□ 0.87
TMEM53-203ENST00000372242 STYK1Q6J9G0 422 aa20.48■□□□□ 0.87
TMEM53-203ENST00000372242 ANKRD44Q8N8A2 993 aa20.48■□□□□ 0.87
TMEM53-203ENST00000372242 RBM17Q96I25 401 aaKnown RBP20.48■□□□□ 0.87
TMEM53-203ENST00000372242 PIM2Q9P1W9 311 aa20.48■□□□□ 0.87
TMEM53-203ENST00000372242 IRX6P78412 446 aaPredicted RBP20.48■□□□□ 0.87
TMEM53-203ENST00000372242 FAM161AQ3B820 660 aa20.48■□□□□ 0.87
TMEM53-203ENST00000372242 DDX46Q7L014 1031 aaKnown RBP20.48■□□□□ 0.87
TMEM53-203ENST00000372242 CRBNQ96SW2 442 aa20.48■□□□□ 0.87
TMEM53-203ENST00000372242 BRCA1P38398 1863 aaKnown RBP20.48■□□□□ 0.87
TMEM53-203ENST00000372242 CACNA1SQ13698 1873 aa20.48■□□□□ 0.87
TMEM53-203ENST00000372242 COL4A1P02462 1669 aa20.47■□□□□ 0.87
TMEM53-203ENST00000372242 GNAI2P04899 355 aa20.47■□□□□ 0.87
TMEM53-203ENST00000372242 RABL6Q3YEC7 729 aaPredicted RBP20.46■□□□□ 0.87
TMEM53-203ENST00000372242 TTLL6Q8N841 843 aa20.46■□□□□ 0.87
TMEM53-203ENST00000372242 ITGA6P23229 1130 aa20.46■□□□□ 0.87
TMEM53-203ENST00000372242 ALDH1B1P30837 517 aa20.46■□□□□ 0.87
TMEM53-203ENST00000372242 PRPF40BQ6NWY9 871 aaKnown RBP20.46■□□□□ 0.87
TMEM53-203ENST00000372242 CELF1Q92879 486 aaKnown RBP20.46■□□□□ 0.87
TMEM53-203ENST00000372242 CNKSR1Q969H4 720 aa20.46■□□□□ 0.87
TMEM53-203ENST00000372242 CRAMP1Q96RY5 1269 aa20.46■□□□□ 0.87
TMEM53-203ENST00000372242 ZBTB40Q9NUA8 1239 aa20.46■□□□□ 0.87
TMEM53-203ENST00000372242 HDAC5Q9UQL6 1122 aa20.46■□□□□ 0.87
TMEM53-203ENST00000372242 SLC51AQ86UW1 340 aa20.45■□□□□ 0.86
TMEM53-203ENST00000372242 PELP1Q8IZL8 1130 aaKnown RBP20.45■□□□□ 0.86
TMEM53-203ENST00000372242 ZNF219Q9P2Y4 722 aaPredicted RBP20.45■□□□□ 0.86
TMEM53-203ENST00000372242 BCS1LQ9Y276 419 aa20.45■□□□□ 0.86
TMEM53-203ENST00000372242 SLX4Q8IY92 1834 aa20.45■□□□□ 0.86
TMEM53-203ENST00000372242 DALRD3Q5D0E6 543 aaKnown RBP20.44■□□□□ 0.86
TMEM53-203ENST00000372242 GRAPQ13588 217 aa20.43■□□□□ 0.86
TMEM53-203ENST00000372242 GRAPLQ8TC17 118 aaPredicted RBP20.43■□□□□ 0.86
TMEM53-203ENST00000372242 RTL9Q8NET4 1388 aa20.43■□□□□ 0.86
TMEM53-203ENST00000372242 IFIT5Q13325 482 aaKnown RBP20.43■□□□□ 0.86
TMEM53-203ENST00000372242 CCDC57Q2TAC2 916 aa20.42■□□□□ 0.86
TMEM53-203ENST00000372242 OLFM4Q6UX06 510 aa20.42■□□□□ 0.86
TMEM53-203ENST00000372242 ANKRD18BA2A2Z9 1011 aa20.41■□□□□ 0.86
TMEM53-203ENST00000372242 RPS8P62241 208 aaKnown RBP20.41■□□□□ 0.86
TMEM53-203ENST00000372242 ZNF594Q96JF6 807 aaPredicted RBP20.41■□□□□ 0.86
TMEM53-203ENST00000372242 CHMP4BQ9H444 224 aaKnown RBP20.41■□□□□ 0.86
TMEM53-203ENST00000372242 PPEF1O14829 653 aaPredicted RBP20.41■□□□□ 0.86
TMEM53-203ENST00000372242 C21orf2O43822 256 aa20.41■□□□□ 0.86
TMEM53-203ENST00000372242 YBX3P16989 372 aaKnown RBP eCLIP20.41■□□□□ 0.86
TMEM53-203ENST00000372242 EXOC6Q8TAG9 804 aa20.41■□□□□ 0.86
TMEM53-203ENST00000372242 KLHDC4Q8TBB5 520 aa20.41■□□□□ 0.86
TMEM53-203ENST00000372242 CDC5LQ99459 802 aaKnown RBP20.41■□□□□ 0.86
TMEM53-203ENST00000372242 BBOX1O75936 387 aa20.4■□□□□ 0.86
TMEM53-203ENST00000372242 ANKRD18AQ8IVF6 992 aa20.4■□□□□ 0.86
TMEM53-203ENST00000372242 SPEF2Q9C093 1822 aa20.4■□□□□ 0.86
TMEM53-203ENST00000372242 UTRNP46939 3433 aa20.4■□□□□ 0.86
TMEM53-203ENST00000372242 PNMA6EA0A0J9YXQ4 647 aa20.39■□□□□ 0.86
TMEM53-203ENST00000372242 SRGAP3O43295 1099 aa20.39■□□□□ 0.86
TMEM53-203ENST00000372242 C7orf43Q8WVR3 580 aa20.39■□□□□ 0.86
TMEM53-203ENST00000372242 MTX1Q13505 466 aa20.39■□□□□ 0.85
TMEM53-203ENST00000372242 GPR162Q16538 588 aa20.39■□□□□ 0.85
TMEM53-203ENST00000372242 TAF7LQ5H9L4 462 aa20.39■□□□□ 0.85
TMEM53-203ENST00000372242 CEP85Q6P2H3 762 aa20.38■□□□□ 0.85
TMEM53-203ENST00000372242 IGHMBP2P38935 993 aaKnown RBP20.37■□□□□ 0.85
TMEM53-203ENST00000372242 RFX5P48382 616 aaPredicted RBP20.37■□□□□ 0.85
TMEM53-203ENST00000372242 ATP6V0A2Q9Y487 856 aa20.37■□□□□ 0.85
TMEM53-203ENST00000372242 ATP8B2P98198 1209 aa20.37■□□□□ 0.85
TMEM53-203ENST00000372242 MPHOSPH8Q99549 860 aa20.37■□□□□ 0.85
TMEM53-203ENST00000372242 ARFGEF1Q9Y6D6 1849 aa20.36■□□□□ 0.85
TMEM53-203ENST00000372242 LDHAL6AQ6ZMR3 332 aa20.36■□□□□ 0.85
TMEM53-203ENST00000372242 PUS3Q9BZE2 481 aaKnown RBP20.36■□□□□ 0.85
TMEM53-203ENST00000372242 BSDC1Q9NW68 430 aaPredicted RBP20.36■□□□□ 0.85
TMEM53-203ENST00000372242 PA2G4Q9UQ80 394 aaKnown RBP20.36■□□□□ 0.85
TMEM53-203ENST00000372242 PTPN12Q05209 780 aaKnown RBP20.35■□□□□ 0.85
TMEM53-203ENST00000372242 SP8Q8IXZ3 490 aa20.35■□□□□ 0.85
TMEM53-203ENST00000372242 SIRT2Q8IXJ6 389 aa20.34■□□□□ 0.85
TMEM53-203ENST00000372242 SIL1Q9H173 461 aa20.34■□□□□ 0.85
TMEM53-203ENST00000372242 TMC4Q7Z404 712 aa20.34■□□□□ 0.85
TMEM53-203ENST00000372242 SSH3Q8TE77 659 aa20.34■□□□□ 0.85
TMEM53-203ENST00000372242 POLA2Q14181 598 aa20.33■□□□□ 0.85
TMEM53-203ENST00000372242 LRRC24Q50LG9 513 aa20.33■□□□□ 0.85
TMEM53-203ENST00000372242 RPAP2Q8IXW5 612 aaPredicted RBP20.33■□□□□ 0.85
TMEM53-203ENST00000372242 CNNM1Q9NRU3 951 aa20.33■□□□□ 0.85
TMEM53-203ENST00000372242 MINPP1Q9UNW1 487 aa20.33■□□□□ 0.85
TMEM53-203ENST00000372242 PCDHB15Q9Y5E8 787 aa20.33■□□□□ 0.85
TMEM53-203ENST00000372242 LRRC37AA6NMS7 1700 aa20.32■□□□□ 0.84
TMEM53-203ENST00000372242 CCDC93Q567U6 631 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms