RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 RHPN1Q8TCX5 695 aa11.31□□□□□ -0.6
COL4A6-202ENST00000372216 ATP7AQ04656 1500 aa11.31□□□□□ -0.6
COL4A6-202ENST00000372216 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
COL4A6-202ENST00000372216 MEIS3Q99687 375 aa11.31□□□□□ -0.6
COL4A6-202ENST00000372216 DNAI2Q9GZS0 605 aa11.31□□□□□ -0.6
COL4A6-202ENST00000372216 CTNNA2P26232 953 aa11.31□□□□□ -0.6
COL4A6-202ENST00000372216 TTC22Q5TAA0 569 aa11.31□□□□□ -0.6
COL4A6-202ENST00000372216 TAF4BQ92750 862 aa11.31□□□□□ -0.6
COL4A6-202ENST00000372216 DCAF5Q96JK2 942 aa11.31□□□□□ -0.6
COL4A6-202ENST00000372216 USP16Q9Y5T5 823 aa11.31□□□□□ -0.6
COL4A6-202ENST00000372216 METAP2P50579 478 aaKnown RBP eCLIP11.31□□□□□ -0.6
COL4A6-202ENST00000372216 TPTE2Q6XPS3 522 aa11.31□□□□□ -0.6
COL4A6-202ENST00000372216 ALDH1L1O75891 902 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 LEKR1Q6ZMV7 388 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 A0A1W2PP64 1363 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 RNMTO43148 476 aaKnown RBP11.3□□□□□ -0.6
COL4A6-202ENST00000372216 GRIPAP1Q4V328 841 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 RGS22Q8NE09 1264 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 ZNF397Q8NF99 534 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-202ENST00000372216 FAM212AQ96EL1 285 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 AKNAD1Q5T1N1 836 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 EP400NLQ6ZTU2 488 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 MICU3Q86XE3 530 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 IP6K1Q92551 441 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 NEK1Q96PY6 1258 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 TBC1D9Q6ZT07 1266 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 OGFOD1Q8N543 542 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 EYA1Q99502 592 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 ZFYVE9O95405 1425 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 RIMBP2O15034 1052 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 GNPATO15228 680 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 IARSP41252 1262 aaKnown RBP11.3□□□□□ -0.6
COL4A6-202ENST00000372216 SLC26A6Q9BXS9 759 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 ABCA5Q8WWZ7 1642 aa11.3□□□□□ -0.6
COL4A6-202ENST00000372216 IRS4O14654 1257 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-202ENST00000372216 VEZTQ9HBM0 779 aa11.29□□□□□ -0.6
COL4A6-202ENST00000372216 PABPN1LA6NDY0 278 aaKnown RBP11.29□□□□□ -0.6
COL4A6-202ENST00000372216 GJB2P29033 226 aa11.29□□□□□ -0.6
COL4A6-202ENST00000372216 NAA16Q6N069 864 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-202ENST00000372216 DYDC1Q8WWB3 177 aa11.29□□□□□ -0.6
COL4A6-202ENST00000372216 TBX22Q9Y458 520 aa11.29□□□□□ -0.6
COL4A6-202ENST00000372216 LMAN1P49257 510 aa11.29□□□□□ -0.6
COL4A6-202ENST00000372216 TRAPPC3LQ5T215 181 aa11.29□□□□□ -0.6
COL4A6-202ENST00000372216 CPLX3Q8WVH0 158 aa11.29□□□□□ -0.6
COL4A6-202ENST00000372216 ARHGAP45Q92619 1136 aa11.29□□□□□ -0.6
COL4A6-202ENST00000372216 GSTTP1A0A1W2PQM5 241 aa11.29□□□□□ -0.6
COL4A6-202ENST00000372216 MPHOSPH6Q99547 160 aaKnown RBP11.29□□□□□ -0.6
COL4A6-202ENST00000372216 NF2P35240 595 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 IL15P40933 162 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-202ENST00000372216 CFAP100Q494V2 611 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 ISM2Q6H9L7 571 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 RBM17Q96I25 401 aaKnown RBP11.28□□□□□ -0.6
COL4A6-202ENST00000372216 EPB41L2O43491 1005 aaKnown RBP11.28□□□□□ -0.6
COL4A6-202ENST00000372216 FKBP15Q5T1M5 1219 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 CACNA2D4Q7Z3S7 1137 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 PROCA1Q8NCQ7 364 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-202ENST00000372216 CCDC102AQ96A19 550 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 HMG20BQ9P0W2 317 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 SYCP3Q8IZU3 236 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 OTUD6BQ8N6M0 293 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 CALML4Q96GE6 196 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 KRT23Q9C075 422 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 CEP170Q5SW79 1584 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 MAPKBP1O60336 1514 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 MAGEB6P1A0A0J9YX57 407 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 WTAPQ15007 396 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 SCAND2PQ9GZW5 306 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-202ENST00000372216 STX8Q9UNK0 236 aa11.28□□□□□ -0.6
COL4A6-202ENST00000372216 SYCE3A1L190 88 aa11.27□□□□□ -0.6
COL4A6-202ENST00000372216 DNMT1P26358 1616 aaKnown RBP11.27□□□□□ -0.6
COL4A6-202ENST00000372216 IFIT1BQ5T764 474 aaKnown RBP11.27□□□□□ -0.6
COL4A6-202ENST00000372216 TCERG1LQ5VWI1 586 aa11.27□□□□□ -0.6
COL4A6-202ENST00000372216 FILIP1Q7Z7B0 1213 aa11.27□□□□□ -0.6
COL4A6-202ENST00000372216 PA2G4Q9UQ80 394 aaKnown RBP11.27□□□□□ -0.6
COL4A6-202ENST00000372216 JAG2Q9Y219 1238 aa11.27□□□□□ -0.6
COL4A6-202ENST00000372216 GJA3Q9Y6H8 435 aa11.27□□□□□ -0.6
COL4A6-202ENST00000372216 KIAA0754O94854 1291 aa11.27□□□□□ -0.6
COL4A6-202ENST00000372216 IGHDP01880 384 aa11.27□□□□□ -0.6
COL4A6-202ENST00000372216 GRPEL1Q9HAV7 217 aa11.27□□□□□ -0.6
COL4A6-202ENST00000372216 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-202ENST00000372216 SMC1AQ14683 1233 aaKnown RBP11.27□□□□□ -0.61
COL4A6-202ENST00000372216 CNNM3Q8NE01 707 aa11.27□□□□□ -0.61
COL4A6-202ENST00000372216 MCM4P33991 863 aa11.27□□□□□ -0.61
COL4A6-202ENST00000372216 MCM5P33992 734 aa11.27□□□□□ -0.61
COL4A6-202ENST00000372216 SP4Q02446 784 aa11.27□□□□□ -0.61
COL4A6-202ENST00000372216 RFX1P22670 979 aa11.27□□□□□ -0.61
COL4A6-202ENST00000372216 ATP8B2P98198 1209 aa11.27□□□□□ -0.61
COL4A6-202ENST00000372216 PRPF4BQ13523 1007 aaKnown RBP11.27□□□□□ -0.61
COL4A6-202ENST00000372216 ZBTB9Q96C00 473 aa11.27□□□□□ -0.61
COL4A6-202ENST00000372216 CCNL1Q9UK58 526 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-202ENST00000372216 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
COL4A6-202ENST00000372216 ERICH4A6NGS2 130 aa11.26□□□□□ -0.61
COL4A6-202ENST00000372216 CWF19L2Q2TBE0 894 aaKnown RBP11.26□□□□□ -0.61
COL4A6-202ENST00000372216 ORAI2Q96SN7 254 aa11.26□□□□□ -0.61
COL4A6-202ENST00000372216 PANK2Q9BZ23 570 aa11.26□□□□□ -0.61
COL4A6-202ENST00000372216 STK32BQ9NY57 414 aa11.26□□□□□ -0.61
COL4A6-202ENST00000372216 DISP1Q96F81 1524 aa11.26□□□□□ -0.61
COL4A6-202ENST00000372216 PRC1O43663 620 aa11.26□□□□□ -0.61
COL4A6-202ENST00000372216 MAP2K1Q02750 393 aaPredicted RBP11.26□□□□□ -0.61
COL4A6-202ENST00000372216 NUCB1Q02818 461 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms