RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 SMC3Q9UQE7 1217 aa24.66■■□□□ 1.54
VEGFA-204ENST00000372064 TOGARAM1Q9Y4F4 1720 aa24.66■■□□□ 1.54
VEGFA-204ENST00000372064 SYT1P21579 422 aa24.65■■□□□ 1.54
VEGFA-204ENST00000372064 PSMA5P28066 241 aa24.65■■□□□ 1.54
VEGFA-204ENST00000372064 STX6O43752 255 aa24.65■■□□□ 1.54
VEGFA-204ENST00000372064 RNF20Q5VTR2 975 aa24.65■■□□□ 1.54
VEGFA-204ENST00000372064 TMOD3Q9NYL9 352 aa24.65■■□□□ 1.54
VEGFA-204ENST00000372064 PRIM1P49642 420 aaKnown RBP24.65■■□□□ 1.54
VEGFA-204ENST00000372064 TSGA10IPQ3SY00 556 aa24.65■■□□□ 1.54
VEGFA-204ENST00000372064 LRSAM1Q6UWE0 723 aa24.65■■□□□ 1.54
VEGFA-204ENST00000372064 CCDC191Q8NCU4 936 aa24.65■■□□□ 1.54
VEGFA-204ENST00000372064 COL9A3Q14050 684 aaPredicted RBP24.64■■□□□ 1.54
VEGFA-204ENST00000372064 DNAJC2Q99543 621 aaKnown RBP24.64■■□□□ 1.54
VEGFA-204ENST00000372064 HAUS7Q99871 368 aa24.64■■□□□ 1.54
VEGFA-204ENST00000372064 ALDH8A1Q9H2A2 487 aaPredicted RBP24.64■■□□□ 1.54
VEGFA-204ENST00000372064 NHSL1Q5SYE7 1610 aa24.64■■□□□ 1.53
VEGFA-204ENST00000372064 ST3GAL1Q11201 340 aa24.64■■□□□ 1.53
VEGFA-204ENST00000372064 USPL1Q5W0Q7 1092 aa24.64■■□□□ 1.53
VEGFA-204ENST00000372064 HMG20BQ9P0W2 317 aa24.64■■□□□ 1.53
VEGFA-204ENST00000372064 TAF5LO75529 589 aa24.63■■□□□ 1.53
VEGFA-204ENST00000372064 ATG9AQ7Z3C6 839 aa24.63■■□□□ 1.53
VEGFA-204ENST00000372064 CCDC9Q9Y3X0 531 aaKnown RBP24.63■■□□□ 1.53
VEGFA-204ENST00000372064 CCDC83Q8IWF9 413 aa24.63■■□□□ 1.53
VEGFA-204ENST00000372064 RBSNQ9H1K0 784 aa24.63■■□□□ 1.53
VEGFA-204ENST00000372064 CHGBP05060 677 aa24.62■■□□□ 1.53
VEGFA-204ENST00000372064 ME3Q16798 604 aa24.62■■□□□ 1.53
VEGFA-204ENST00000372064 ZNF330Q9Y3S2 320 aaPredicted RBP24.62■■□□□ 1.53
VEGFA-204ENST00000372064 TAF6LQ9Y6J9 622 aa24.62■■□□□ 1.53
VEGFA-204ENST00000372064 USP48Q86UV5 1035 aa24.62■■□□□ 1.53
VEGFA-204ENST00000372064 GPR108Q9NPR9 543 aa24.62■■□□□ 1.53
VEGFA-204ENST00000372064 ASAP1Q9ULH1 1129 aa24.62■■□□□ 1.53
VEGFA-204ENST00000372064 DTNBO60941 627 aa24.62■■□□□ 1.53
VEGFA-204ENST00000372064 BTG4Q9NY30 223 aa24.62■■□□□ 1.53
VEGFA-204ENST00000372064 F13A1P00488 732 aa24.61■■□□□ 1.53
VEGFA-204ENST00000372064 GJB2P29033 226 aa24.61■■□□□ 1.53
VEGFA-204ENST00000372064 TPCN1Q9ULQ1 816 aa24.61■■□□□ 1.53
VEGFA-204ENST00000372064 SYCE3A1L190 88 aa24.6■■□□□ 1.53
VEGFA-204ENST00000372064 ZNF609O15014 1411 aa24.6■■□□□ 1.53
VEGFA-204ENST00000372064 PIGBQ92521 554 aa24.6■■□□□ 1.53
VEGFA-204ENST00000372064 ZNF594Q96JF6 807 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-204ENST00000372064 GDPD2Q9HCC8 539 aa24.6■■□□□ 1.53
VEGFA-204ENST00000372064 CLCN1P35523 988 aa24.6■■□□□ 1.53
VEGFA-204ENST00000372064 DDX46Q7L014 1031 aaKnown RBP24.6■■□□□ 1.53
VEGFA-204ENST00000372064 NEUROD6Q96NK8 337 aa24.6■■□□□ 1.53
VEGFA-204ENST00000372064 RPS6KB1P23443 525 aa24.59■■□□□ 1.53
VEGFA-204ENST00000372064 DNAJC10Q8IXB1 793 aa24.59■■□□□ 1.53
VEGFA-204ENST00000372064 ANP32BQ92688 251 aaKnown RBP24.59■■□□□ 1.53
VEGFA-204ENST00000372064 TRIM44Q96DX7 344 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-204ENST00000372064 GADD45BO75293 160 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-204ENST00000372064 ANKRD1Q15327 319 aa24.59■■□□□ 1.53
VEGFA-204ENST00000372064 LRRC24Q50LG9 513 aa24.59■■□□□ 1.53
VEGFA-204ENST00000372064 BLOC1S2Q6QNY1 142 aa24.59■■□□□ 1.53
VEGFA-204ENST00000372064 ATG3Q9NT62 314 aa24.59■■□□□ 1.53
VEGFA-204ENST00000372064 TIMM10P62072 90 aa24.58■■□□□ 1.53
VEGFA-204ENST00000372064 SYAP1Q96A49 352 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-204ENST00000372064 ISCA1Q9BUE6 129 aa24.58■■□□□ 1.53
VEGFA-204ENST00000372064 SEC62Q99442 399 aaKnown RBP24.58■■□□□ 1.53
VEGFA-204ENST00000372064 ATP6V1DQ9Y5K8 247 aa24.58■■□□□ 1.53
VEGFA-204ENST00000372064 IL15P40933 162 aaPredicted RBP24.58■■□□□ 1.52
VEGFA-204ENST00000372064 TICAM2Q86XR7 235 aa24.58■■□□□ 1.52
VEGFA-204ENST00000372064 TCEANC2Q96MN5 208 aa24.58■■□□□ 1.52
VEGFA-204ENST00000372064 MTMR6Q9Y217 621 aa24.58■■□□□ 1.52
VEGFA-204ENST00000372064 PALLDQ8WX93 1383 aa24.58■■□□□ 1.52
VEGFA-204ENST00000372064 TCHHQ07283 1943 aa24.57■■□□□ 1.52
VEGFA-204ENST00000372064 ESPNB1AK53 854 aa24.57■■□□□ 1.52
VEGFA-204ENST00000372064 CCDC129Q6ZRS4 1044 aa24.57■■□□□ 1.52
VEGFA-204ENST00000372064 EYA2O00167 538 aa24.57■■□□□ 1.52
VEGFA-204ENST00000372064 TCIRG1Q13488 830 aa24.57■■□□□ 1.52
VEGFA-204ENST00000372064 NECAB1Q8N987 351 aa24.57■■□□□ 1.52
VEGFA-204ENST00000372064 KBTBD3Q8NAB2 608 aa24.56■■□□□ 1.52
VEGFA-204ENST00000372064 CNPY2Q9Y2B0 182 aa24.56■■□□□ 1.52
VEGFA-204ENST00000372064 CIAO1O76071 339 aa24.56■■□□□ 1.52
VEGFA-204ENST00000372064 SH3TC1Q8TE82 1336 aa24.55■■□□□ 1.52
VEGFA-204ENST00000372064 KRT32Q14532 448 aa24.55■■□□□ 1.52
VEGFA-204ENST00000372064 MCMDC2Q4G0Z9 681 aa24.55■■□□□ 1.52
VEGFA-204ENST00000372064 PUS3Q9BZE2 481 aaKnown RBP24.55■■□□□ 1.52
VEGFA-204ENST00000372064 PDIA4P13667 645 aaKnown RBP24.55■■□□□ 1.52
VEGFA-204ENST00000372064 TOB2Q14106 344 aaPredicted RBP24.55■■□□□ 1.52
VEGFA-204ENST00000372064 U3KPZ7 1027 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-204ENST00000372064 VSIG10Q8N0Z9 540 aa24.54■■□□□ 1.52
VEGFA-204ENST00000372064 PDLIM2Q96JY6 352 aa24.53■■□□□ 1.52
VEGFA-204ENST00000372064 TEX13AQ9BXU3 409 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-204ENST00000372064 GOLIM4O00461 696 aa24.53■■□□□ 1.52
VEGFA-204ENST00000372064 TRIM28Q13263 835 aaKnown RBP24.53■■□□□ 1.52
VEGFA-204ENST00000372064 SPEF2Q9C093 1822 aa24.52■■□□□ 1.52
VEGFA-204ENST00000372064 PHF14O94880 888 aa24.52■■□□□ 1.52
VEGFA-204ENST00000372064 UBE2HP62256 183 aa24.52■■□□□ 1.52
VEGFA-204ENST00000372064 SLFNL1Q499Z3 407 aa24.52■■□□□ 1.52
VEGFA-204ENST00000372064 KIF6Q6ZMV9 814 aa24.52■■□□□ 1.52
VEGFA-204ENST00000372064 A0A1B0GUL7 405 aa24.51■■□□□ 1.51
VEGFA-204ENST00000372064 FAM89AQ96GI7 184 aa24.51■■□□□ 1.51
VEGFA-204ENST00000372064 PAG1Q9NWQ8 432 aa24.51■■□□□ 1.51
VEGFA-204ENST00000372064 STARD3NLO95772 234 aa24.51■■□□□ 1.51
VEGFA-204ENST00000372064 CCDC85AQ96PX6 553 aaPredicted RBP24.51■■□□□ 1.51
VEGFA-204ENST00000372064 CCDC57Q2TAC2 916 aa24.5■■□□□ 1.51
VEGFA-204ENST00000372064 HELLSQ9NRZ9 838 aa24.5■■□□□ 1.51
VEGFA-204ENST00000372064 NEK1Q96PY6 1258 aa24.5■■□□□ 1.51
VEGFA-204ENST00000372064 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.49■■□□□ 1.51
VEGFA-204ENST00000372064 TSPY26PQ9H489 355 aa24.49■■□□□ 1.51
VEGFA-204ENST00000372064 FBXO3Q9UK99 471 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms