RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 CHMP3Q9Y3E7 222 aa16.36■□□□□ 0.21
TTC39A-204ENST00000371750 HSP90B1P14625 803 aaKnown RBP16.35■□□□□ 0.21
TTC39A-204ENST00000371750 AAMPQ13685 434 aa16.35■□□□□ 0.21
TTC39A-204ENST00000371750 TTLL11Q8NHH1 800 aa16.35■□□□□ 0.21
TTC39A-204ENST00000371750 BRIP1Q9BX63 1249 aa16.35■□□□□ 0.21
TTC39A-204ENST00000371750 GREM2Q9H772 168 aa16.35■□□□□ 0.21
TTC39A-204ENST00000371750 TAF1P21675 1872 aa16.35■□□□□ 0.21
TTC39A-204ENST00000371750 PNMA6EA0A0J9YXQ4 647 aa16.35■□□□□ 0.21
TTC39A-204ENST00000371750 MTX1Q13505 466 aa16.35■□□□□ 0.21
TTC39A-204ENST00000371750 NLRP3Q96P20 1036 aa16.35■□□□□ 0.21
TTC39A-204ENST00000371750 CSF1RP07333 972 aa16.34■□□□□ 0.21
TTC39A-204ENST00000371750 SIRT2Q8IXJ6 389 aa16.34■□□□□ 0.21
TTC39A-204ENST00000371750 CACNA1SQ13698 1873 aa16.34■□□□□ 0.21
TTC39A-204ENST00000371750 SRGAP3O43295 1099 aa16.33■□□□□ 0.21
TTC39A-204ENST00000371750 SF3B3Q15393 1217 aaKnown RBP16.33■□□□□ 0.21
TTC39A-204ENST00000371750 CRY2Q49AN0 593 aa16.33■□□□□ 0.21
TTC39A-204ENST00000371750 CCDC152Q4G0S7 254 aa16.33■□□□□ 0.21
TTC39A-204ENST00000371750 RTL9Q8NET4 1388 aa16.33■□□□□ 0.2
TTC39A-204ENST00000371750 KLRG2A4D1S0 409 aaPredicted RBP16.32■□□□□ 0.2
TTC39A-204ENST00000371750 PDE6BP35913 854 aa16.32■□□□□ 0.2
TTC39A-204ENST00000371750 ATP8B2P98198 1209 aa16.32■□□□□ 0.2
TTC39A-204ENST00000371750 RPAP2Q8IXW5 612 aaPredicted RBP16.32■□□□□ 0.2
TTC39A-204ENST00000371750 KLHL34Q8N239 644 aa16.32■□□□□ 0.2
TTC39A-204ENST00000371750 SEC31BQ9NQW1 1179 aa16.32■□□□□ 0.2
TTC39A-204ENST00000371750 ITGA6P23229 1130 aa16.31■□□□□ 0.2
TTC39A-204ENST00000371750 CHRNA5P30532 468 aa16.31■□□□□ 0.2
TTC39A-204ENST00000371750 RFX5P48382 616 aaPredicted RBP16.31■□□□□ 0.2
TTC39A-204ENST00000371750 POLA2Q14181 598 aa16.31■□□□□ 0.2
TTC39A-204ENST00000371750 C2CD5Q86YS7 1000 aa16.31■□□□□ 0.2
TTC39A-204ENST00000371750 KLHDC4Q8TBB5 520 aa16.31■□□□□ 0.2
TTC39A-204ENST00000371750 PPP1R1BQ9UD71 204 aaPredicted RBP16.31■□□□□ 0.2
TTC39A-204ENST00000371750 ERICH6BQ5W0A0 696 aa16.3■□□□□ 0.2
TTC39A-204ENST00000371750 SSH3Q8TE77 659 aa16.3■□□□□ 0.2
TTC39A-204ENST00000371750 RPGRQ92834 1020 aaKnown RBP16.3■□□□□ 0.2
TTC39A-204ENST00000371750 BRCA1P38398 1863 aaKnown RBP16.3■□□□□ 0.2
TTC39A-204ENST00000371750 A0A1B0GUL6 1792 aa16.3■□□□□ 0.2
TTC39A-204ENST00000371750 SRGNP10124 158 aa16.29■□□□□ 0.2
TTC39A-204ENST00000371750 IFIT5Q13325 482 aaKnown RBP16.29■□□□□ 0.2
TTC39A-204ENST00000371750 ZNF594Q96JF6 807 aaPredicted RBP16.29■□□□□ 0.2
TTC39A-204ENST00000371750 PA2G4Q9UQ80 394 aaKnown RBP16.29■□□□□ 0.2
TTC39A-204ENST00000371750 ANKRD18BA2A2Z9 1011 aa16.29■□□□□ 0.2
TTC39A-204ENST00000371750 CCDC57Q2TAC2 916 aa16.29■□□□□ 0.2
TTC39A-204ENST00000371750 LRRC37AA6NMS7 1700 aa16.28■□□□□ 0.2
TTC39A-204ENST00000371750 HMMRO75330 724 aa16.28■□□□□ 0.2
TTC39A-204ENST00000371750 DDX46Q7L014 1031 aaKnown RBP16.28■□□□□ 0.2
TTC39A-204ENST00000371750 CELF1Q92879 486 aaKnown RBP16.28■□□□□ 0.2
TTC39A-204ENST00000371750 H0YIN7 160 aa16.28■□□□□ 0.2
TTC39A-204ENST00000371750 PTPN12Q05209 780 aaKnown RBP16.28■□□□□ 0.2
TTC39A-204ENST00000371750 NPR1P16066 1061 aa16.27■□□□□ 0.2
TTC39A-204ENST00000371750 DPEP1P16444 411 aa16.27■□□□□ 0.2
TTC39A-204ENST00000371750 HDAC1Q13547 482 aaPredicted RBP16.27■□□□□ 0.2
TTC39A-204ENST00000371750 TAF7LQ5H9L4 462 aa16.27■□□□□ 0.2
TTC39A-204ENST00000371750 SLC51AQ86UW1 340 aa16.27■□□□□ 0.2
TTC39A-204ENST00000371750 RBM17Q96I25 401 aaKnown RBP16.27■□□□□ 0.2
TTC39A-204ENST00000371750 SIL1Q9H173 461 aa16.27■□□□□ 0.2
TTC39A-204ENST00000371750 CD2APQ9Y5K6 639 aa16.27■□□□□ 0.2
TTC39A-204ENST00000371750 IGHDP01880 384 aa16.26■□□□□ 0.19
TTC39A-204ENST00000371750 HOXA10P31260 410 aaPredicted RBP16.26■□□□□ 0.19
TTC39A-204ENST00000371750 GRAPQ13588 217 aa16.26■□□□□ 0.19
TTC39A-204ENST00000371750 GRAPLQ8TC17 118 aaPredicted RBP16.26■□□□□ 0.19
TTC39A-204ENST00000371750 MASTLQ96GX5 879 aa16.26■□□□□ 0.19
TTC39A-204ENST00000371750 CDC5LQ99459 802 aaKnown RBP16.26■□□□□ 0.19
TTC39A-204ENST00000371750 A0A0G2JLW4 131 aa16.26■□□□□ 0.19
TTC39A-204ENST00000371750 NLGN2Q8NFZ4 835 aa16.26■□□□□ 0.19
TTC39A-204ENST00000371750 ZNF622Q969S3 477 aaKnown RBP eCLIP16.26■□□□□ 0.19
TTC39A-204ENST00000371750 COPRSQ9NQ92 184 aa16.26■□□□□ 0.19
TTC39A-204ENST00000371750 PPP4R2Q9NY27 417 aa16.26■□□□□ 0.19
TTC39A-204ENST00000371750 EXOC6BQ9Y2D4 811 aa16.26■□□□□ 0.19
TTC39A-204ENST00000371750 SLX4Q8IY92 1834 aa16.25■□□□□ 0.19
TTC39A-204ENST00000371750 STYK1Q6J9G0 422 aa16.25■□□□□ 0.19
TTC39A-204ENST00000371750 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
TTC39A-204ENST00000371750 ANKRD18AQ8IVF6 992 aa16.25■□□□□ 0.19
TTC39A-204ENST00000371750 CRAMP1Q96RY5 1269 aa16.25■□□□□ 0.19
TTC39A-204ENST00000371750 PUS3Q9BZE2 481 aaKnown RBP16.25■□□□□ 0.19
TTC39A-204ENST00000371750 FHDC1Q9C0D6 1143 aaPredicted RBP16.25■□□□□ 0.19
TTC39A-204ENST00000371750 PDZRN3Q9UPQ7 1066 aa16.25■□□□□ 0.19
TTC39A-204ENST00000371750 TGFB2P61812 414 aa16.24■□□□□ 0.19
TTC39A-204ENST00000371750 CCDC136Q96JN2 1154 aa16.24■□□□□ 0.19
TTC39A-204ENST00000371750 RWDD1Q9H446 243 aaPredicted RBP16.24■□□□□ 0.19
TTC39A-204ENST00000371750 SURF6O75683 361 aaKnown RBP16.24■□□□□ 0.19
TTC39A-204ENST00000371750 KCNA3P22001 575 aa16.24■□□□□ 0.19
TTC39A-204ENST00000371750 IGHMBP2P38935 993 aaKnown RBP16.24■□□□□ 0.19
TTC39A-204ENST00000371750 LRRC24Q50LG9 513 aa16.24■□□□□ 0.19
TTC39A-204ENST00000371750 WWC3Q9ULE0 1092 aa16.23■□□□□ 0.19
TTC39A-204ENST00000371750 EYA2O00167 538 aa16.23■□□□□ 0.19
TTC39A-204ENST00000371750 PPEF1O14829 653 aaPredicted RBP16.23■□□□□ 0.19
TTC39A-204ENST00000371750 RPS8P62241 208 aaKnown RBP16.23■□□□□ 0.19
TTC39A-204ENST00000371750 PRPF40BQ6NWY9 871 aaKnown RBP16.23■□□□□ 0.19
TTC39A-204ENST00000371750 LDHAL6AQ6ZMR3 332 aa16.23■□□□□ 0.19
TTC39A-204ENST00000371750 MPHOSPH8Q99549 860 aa16.23■□□□□ 0.19
TTC39A-204ENST00000371750 CNNM1Q9NRU3 951 aa16.23■□□□□ 0.19
TTC39A-204ENST00000371750 NOP58Q9Y2X3 529 aaKnown RBP16.23■□□□□ 0.19
TTC39A-204ENST00000371750 SRCAPQ6ZRS2 3230 aa16.22■□□□□ 0.19
TTC39A-204ENST00000371750 ATG9AQ7Z3C6 839 aa16.22■□□□□ 0.19
TTC39A-204ENST00000371750 DCTPP1Q9H773 170 aa16.22■□□□□ 0.19
TTC39A-204ENST00000371750 KDM2BQ8NHM5 1336 aa16.22■□□□□ 0.19
TTC39A-204ENST00000371750 LTBP1Q14766 1721 aa16.22■□□□□ 0.19
TTC39A-204ENST00000371750 APBB1O00213 710 aa16.21■□□□□ 0.19
TTC39A-204ENST00000371750 ALDH1B1P30837 517 aa16.21■□□□□ 0.19
TTC39A-204ENST00000371750 OS9Q13438 667 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms