RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 ZNF521Q96K83 1311 aa18.52■□□□□ 0.56
EDF1-202ENST00000371648 PASKQ96RG2 1323 aa18.52■□□□□ 0.56
EDF1-202ENST00000371648 VAMP4O75379 141 aa18.52■□□□□ 0.56
EDF1-202ENST00000371648 HSPA1AP0DMV8 641 aaKnown RBP18.52■□□□□ 0.56
EDF1-202ENST00000371648 HSPA1BP0DMV9 641 aaKnown RBP18.52■□□□□ 0.56
EDF1-202ENST00000371648 PNMA8AQ86V59 439 aaPredicted RBP18.52■□□□□ 0.56
EDF1-202ENST00000371648 TRMT112Q9UI30 125 aaKnown RBP18.52■□□□□ 0.56
EDF1-202ENST00000371648 ATP6V0A2Q9Y487 856 aa18.52■□□□□ 0.56
EDF1-202ENST00000371648 ABCC4O15439 1325 aa18.51■□□□□ 0.55
EDF1-202ENST00000371648 SCN4AP35499 1836 aa18.51■□□□□ 0.55
EDF1-202ENST00000371648 COL4A5P29400 1685 aa18.51■□□□□ 0.55
EDF1-202ENST00000371648 E9PSI1 815 aa18.51■□□□□ 0.55
EDF1-202ENST00000371648 ITGBL1O95965 494 aaPredicted RBP18.51■□□□□ 0.55
EDF1-202ENST00000371648 ATP5J2-PTCD1G3V325 749 aa18.5■□□□□ 0.55
EDF1-202ENST00000371648 PPIP5K2O43314 1243 aa18.5■□□□□ 0.55
EDF1-202ENST00000371648 MAP1SQ66K74 1059 aaPredicted RBP18.5■□□□□ 0.55
EDF1-202ENST00000371648 NIM1KQ8IY84 436 aa18.5■□□□□ 0.55
EDF1-202ENST00000371648 SH3TC1Q8TE82 1336 aa18.49■□□□□ 0.55
EDF1-202ENST00000371648 BBOX1O75936 387 aa18.49■□□□□ 0.55
EDF1-202ENST00000371648 LMOD1P29536 600 aaPredicted RBP18.49■□□□□ 0.55
EDF1-202ENST00000371648 AOC3Q16853 763 aa18.49■□□□□ 0.55
EDF1-202ENST00000371648 CNTROBQ8N137 903 aa18.49■□□□□ 0.55
EDF1-202ENST00000371648 TMEM88BA6NKF7 163 aa18.48■□□□□ 0.55
EDF1-202ENST00000371648 SLFN5Q08AF3 891 aa18.48■□□□□ 0.55
EDF1-202ENST00000371648 DDX46Q7L014 1031 aaKnown RBP18.48■□□□□ 0.55
EDF1-202ENST00000371648 CDCA7LQ96GN5 454 aa18.48■□□□□ 0.55
EDF1-202ENST00000371648 EPS15P42566 896 aa18.47■□□□□ 0.55
EDF1-202ENST00000371648 SCNN1DP51172 638 aa18.47■□□□□ 0.55
EDF1-202ENST00000371648 DPP8Q6V1X1 898 aaPredicted RBP18.47■□□□□ 0.55
EDF1-202ENST00000371648 KSR2Q6VAB6 950 aa18.47■□□□□ 0.55
EDF1-202ENST00000371648 G2E3Q7L622 706 aa18.47■□□□□ 0.55
EDF1-202ENST00000371648 SP8Q8IXZ3 490 aa18.47■□□□□ 0.55
EDF1-202ENST00000371648 SUPT20HQ8NEM7 779 aa18.47■□□□□ 0.55
EDF1-202ENST00000371648 MYD88Q99836 296 aa18.47■□□□□ 0.55
EDF1-202ENST00000371648 MAP3K2Q9Y2U5 619 aa18.47■□□□□ 0.55
EDF1-202ENST00000371648 ANKRD36CQ5JPF3 1778 aa18.46■□□□□ 0.55
EDF1-202ENST00000371648 PI4KAP2A4QPH2 592 aa18.46■□□□□ 0.55
EDF1-202ENST00000371648 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
EDF1-202ENST00000371648 GRAPQ13588 217 aa18.46■□□□□ 0.55
EDF1-202ENST00000371648 MPNDQ8N594 471 aa18.46■□□□□ 0.55
EDF1-202ENST00000371648 PI4KAP1Q8N8J0 262 aa18.46■□□□□ 0.55
EDF1-202ENST00000371648 GRAPLQ8TC17 118 aaPredicted RBP18.46■□□□□ 0.55
EDF1-202ENST00000371648 VPS33BQ9H267 617 aa18.46■□□□□ 0.55
EDF1-202ENST00000371648 CNTNAP1P78357 1384 aa18.45■□□□□ 0.54
EDF1-202ENST00000371648 CACNA1FO60840 1977 aa18.45■□□□□ 0.54
EDF1-202ENST00000371648 NEXNQ0ZGT2 675 aa18.45■□□□□ 0.54
EDF1-202ENST00000371648 FKBP5Q13451 457 aaPredicted RBP18.45■□□□□ 0.54
EDF1-202ENST00000371648 TNS4Q8IZW8 715 aa18.45■□□□□ 0.54
EDF1-202ENST00000371648 FAM89AQ96GI7 184 aa18.45■□□□□ 0.54
EDF1-202ENST00000371648 ISCA1Q9BUE6 129 aa18.45■□□□□ 0.54
EDF1-202ENST00000371648 RTFDC1Q9BY42 306 aaPredicted RBP18.45■□□□□ 0.54
EDF1-202ENST00000371648 CXCL9Q07325 125 aa18.44■□□□□ 0.54
EDF1-202ENST00000371648 FLIIQ13045 1269 aa18.44■□□□□ 0.54
EDF1-202ENST00000371648 RTL5Q5HYW3 569 aaPredicted RBP18.44■□□□□ 0.54
EDF1-202ENST00000371648 METTL22Q9BUU2 404 aaPredicted RBP18.44■□□□□ 0.54
EDF1-202ENST00000371648 ZNRF3Q9ULT6 936 aa18.44■□□□□ 0.54
EDF1-202ENST00000371648 VEGFBP49765 207 aa18.43■□□□□ 0.54
EDF1-202ENST00000371648 TRIM28Q13263 835 aaKnown RBP18.43■□□□□ 0.54
EDF1-202ENST00000371648 ADAMTSL1Q8N6G6 1762 aa18.42■□□□□ 0.54
EDF1-202ENST00000371648 LTBP1Q14766 1721 aa18.42■□□□□ 0.54
EDF1-202ENST00000371648 CAPN15O75808 1086 aa18.41■□□□□ 0.54
EDF1-202ENST00000371648 FMR1Q06787 632 aaKnown RBP eCLIP18.41■□□□□ 0.54
EDF1-202ENST00000371648 KIAA2012Q0VF49 1180 aa18.41■□□□□ 0.54
EDF1-202ENST00000371648 USP50Q70EL3 339 aaPredicted RBP18.41■□□□□ 0.54
EDF1-202ENST00000371648 CCDC191Q8NCU4 936 aa18.41■□□□□ 0.54
EDF1-202ENST00000371648 CWC25Q9NXE8 425 aaPredicted RBP18.41■□□□□ 0.54
EDF1-202ENST00000371648 GPRC5DQ9NZD1 345 aa18.41■□□□□ 0.54
EDF1-202ENST00000371648 RAD17O75943 681 aa18.4■□□□□ 0.54
EDF1-202ENST00000371648 GMPSP49915 693 aaPredicted RBP18.4■□□□□ 0.54
EDF1-202ENST00000371648 SF3B3Q15393 1217 aaKnown RBP18.4■□□□□ 0.54
EDF1-202ENST00000371648 DEFB115Q30KQ5 88 aa18.4■□□□□ 0.54
EDF1-202ENST00000371648 CIAPIN1Q6FI81 312 aa18.4■□□□□ 0.54
EDF1-202ENST00000371648 TMC4Q7Z404 712 aa18.4■□□□□ 0.54
EDF1-202ENST00000371648 CELF1Q92879 486 aaKnown RBP18.4■□□□□ 0.54
EDF1-202ENST00000371648 ABT1Q9ULW3 272 aaKnown RBP18.4■□□□□ 0.54
EDF1-202ENST00000371648 LAMB2P55268 1798 aa18.4■□□□□ 0.54
EDF1-202ENST00000371648 IRS4O14654 1257 aaPredicted RBP18.39■□□□□ 0.53
EDF1-202ENST00000371648 TRMT2AQ8IZ69 625 aaKnown RBP18.39■□□□□ 0.53
EDF1-202ENST00000371648 ZBTB38Q8NAP3 1195 aaPredicted RBP18.39■□□□□ 0.53
EDF1-202ENST00000371648 DNAAF4Q8WXU2 420 aa18.39■□□□□ 0.53
EDF1-202ENST00000371648 ADARB2Q9NS39 739 aaKnown RBP18.39■□□□□ 0.53
EDF1-202ENST00000371648 NSFL1CQ9UNZ2 370 aaKnown RBP18.39■□□□□ 0.53
EDF1-202ENST00000371648 RASSF10A6NK89 507 aa18.38■□□□□ 0.53
EDF1-202ENST00000371648 TRAF5O00463 557 aa18.38■□□□□ 0.53
EDF1-202ENST00000371648 FOXN1O15353 648 aa18.38■□□□□ 0.53
EDF1-202ENST00000371648 HSP90B1P14625 803 aaKnown RBP18.38■□□□□ 0.53
EDF1-202ENST00000371648 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
EDF1-202ENST00000371648 BCL2L13Q9BXK5 485 aa18.38■□□□□ 0.53
EDF1-202ENST00000371648 RIMBP2O15034 1052 aa18.37■□□□□ 0.53
EDF1-202ENST00000371648 TNIP1Q15025 636 aa18.37■□□□□ 0.53
EDF1-202ENST00000371648 CWF19L2Q2TBE0 894 aaKnown RBP18.37■□□□□ 0.53
EDF1-202ENST00000371648 AIDAQ96BJ3 306 aa18.37■□□□□ 0.53
EDF1-202ENST00000371648 TAF1P21675 1872 aa18.37■□□□□ 0.53
EDF1-202ENST00000371648 YDJCA8MPS7 323 aa18.36■□□□□ 0.53
EDF1-202ENST00000371648 F6X3S4 739 aa18.36■□□□□ 0.53
EDF1-202ENST00000371648 C6orf229H3BNL8 230 aa18.36■□□□□ 0.53
EDF1-202ENST00000371648 PCCAP05165 728 aaPredicted RBP18.36■□□□□ 0.53
EDF1-202ENST00000371648 IGKV5-2P06315 115 aa18.36■□□□□ 0.53
EDF1-202ENST00000371648 GPSM2P81274 684 aa18.36■□□□□ 0.53
EDF1-202ENST00000371648 WASHC4Q2M389 1173 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms