RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 RAB11FIP4Q86YS3 637 aa14.06□□□□□ -0.16
PDE6C-201ENST00000371447 KLHL34Q8N239 644 aa14.06□□□□□ -0.16
PDE6C-201ENST00000371447 SLIT3O75094 1523 aa14.06□□□□□ -0.16
PDE6C-201ENST00000371447 STX6O43752 255 aa14.06□□□□□ -0.16
PDE6C-201ENST00000371447 VPS53Q5VIR6 699 aa14.06□□□□□ -0.16
PDE6C-201ENST00000371447 PIGBQ92521 554 aa14.06□□□□□ -0.16
PDE6C-201ENST00000371447 CEBPZQ03701 1054 aaKnown RBP14.05□□□□□ -0.16
PDE6C-201ENST00000371447 WASHC4Q2M389 1173 aa14.05□□□□□ -0.16
PDE6C-201ENST00000371447 CCDC57Q2TAC2 916 aa14.05□□□□□ -0.16
PDE6C-201ENST00000371447 RFX5P48382 616 aaPredicted RBP14.05□□□□□ -0.16
PDE6C-201ENST00000371447 HAND2P61296 217 aa14.05□□□□□ -0.16
PDE6C-201ENST00000371447 DNM1Q05193 864 aaKnown RBP14.05□□□□□ -0.16
PDE6C-201ENST00000371447 HELBQ8NG08 1087 aaPredicted RBP14.05□□□□□ -0.16
PDE6C-201ENST00000371447 TFIP11Q9UBB9 837 aaKnown RBP14.05□□□□□ -0.16
PDE6C-201ENST00000371447 WDR33Q9C0J8 1336 aaKnown RBP14.05□□□□□ -0.16
PDE6C-201ENST00000371447 TTC14Q96N46 770 aa14.05□□□□□ -0.16
PDE6C-201ENST00000371447 PTMSP20962 102 aa14.04□□□□□ -0.16
PDE6C-201ENST00000371447 NECTIN1Q15223 517 aa14.04□□□□□ -0.16
PDE6C-201ENST00000371447 COPRSQ9NQ92 184 aa14.04□□□□□ -0.16
PDE6C-201ENST00000371447 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.04□□□□□ -0.16
PDE6C-201ENST00000371447 ADORA1P30542 326 aa14.04□□□□□ -0.16
PDE6C-201ENST00000371447 KCNQ4P56696 695 aa14.04□□□□□ -0.16
PDE6C-201ENST00000371447 PIP4K2BP78356 416 aa14.04□□□□□ -0.16
PDE6C-201ENST00000371447 HLFQ16534 295 aa14.04□□□□□ -0.16
PDE6C-201ENST00000371447 LARP1BQ659C4 914 aaKnown RBP14.04□□□□□ -0.16
PDE6C-201ENST00000371447 SNAP23O00161 211 aa14.03□□□□□ -0.16
PDE6C-201ENST00000371447 PDIA4P13667 645 aaKnown RBP14.03□□□□□ -0.16
PDE6C-201ENST00000371447 FOXO4P98177 505 aa14.03□□□□□ -0.16
PDE6C-201ENST00000371447 RNF20Q5VTR2 975 aa14.03□□□□□ -0.16
PDE6C-201ENST00000371447 STK11IPQ8N1F8 1099 aa14.03□□□□□ -0.16
PDE6C-201ENST00000371447 NAP1L5Q96NT1 182 aaPredicted RBP14.03□□□□□ -0.16
PDE6C-201ENST00000371447 A0A1B0GUL7 405 aa14.03□□□□□ -0.16
PDE6C-201ENST00000371447 KDM4FA0A1W2PPD8 638 aa14.03□□□□□ -0.16
PDE6C-201ENST00000371447 IFIT1P09914 478 aaKnown RBP14.03□□□□□ -0.16
PDE6C-201ENST00000371447 CEP126Q9P2H0 1117 aa14.03□□□□□ -0.16
PDE6C-201ENST00000371447 KIF6Q6ZMV9 814 aa14.03□□□□□ -0.16
PDE6C-201ENST00000371447 MAP4K1Q92918 833 aa14.03□□□□□ -0.16
PDE6C-201ENST00000371447 UTYO14607 1347 aa14.03□□□□□ -0.16
PDE6C-201ENST00000371447 ZSCAN22P10073 491 aaPredicted RBP14.02□□□□□ -0.16
PDE6C-201ENST00000371447 CCT2P78371 535 aaKnown RBP14.02□□□□□ -0.16
PDE6C-201ENST00000371447 TTLL5Q6EMB2 1281 aa14.02□□□□□ -0.16
PDE6C-201ENST00000371447 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.16
PDE6C-201ENST00000371447 INTS4Q96HW7 963 aaKnown RBP14.02□□□□□ -0.16
PDE6C-201ENST00000371447 JAK2O60674 1132 aa14.02□□□□□ -0.17
PDE6C-201ENST00000371447 TAF5LO75529 589 aa14.02□□□□□ -0.17
PDE6C-201ENST00000371447 CARD10Q9BWT7 1032 aa14.02□□□□□ -0.17
PDE6C-201ENST00000371447 SMIM5Q71RC9 77 aa14.02□□□□□ -0.17
PDE6C-201ENST00000371447 BRF1Q92994 677 aa14.02□□□□□ -0.17
PDE6C-201ENST00000371447 ERBB4Q15303 1308 aa14.01□□□□□ -0.17
PDE6C-201ENST00000371447 CAMTA1Q9Y6Y1 1673 aa14.01□□□□□ -0.17
PDE6C-201ENST00000371447 GUCY1B3Q02153 619 aa14.01□□□□□ -0.17
PDE6C-201ENST00000371447 ZSWIM6Q9HCJ5 1215 aa14.01□□□□□ -0.17
PDE6C-201ENST00000371447 PAG1Q9NWQ8 432 aa14.01□□□□□ -0.17
PDE6C-201ENST00000371447 ERVV-2B6SEH9 535 aa14.01□□□□□ -0.17
PDE6C-201ENST00000371447 HIP1O00291 1037 aa14.01□□□□□ -0.17
PDE6C-201ENST00000371447 GLIPR1L2Q4G1C9 344 aa14.01□□□□□ -0.17
PDE6C-201ENST00000371447 ATG9AQ7Z3C6 839 aa14.01□□□□□ -0.17
PDE6C-201ENST00000371447 H7C1W4 665 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 ATP5JP18859 108 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 CAMK4Q16566 473 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 ZMYND15Q9H091 742 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 USP42Q9H9J4 1324 aaKnown RBP14□□□□□ -0.17
PDE6C-201ENST00000371447 ZNF142P52746 1687 aaPredicted RBP14□□□□□ -0.17
PDE6C-201ENST00000371447 PSMA5P28066 241 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 TTC39AQ5SRH9 613 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 Q6ZUG5 572 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 CDC37L1Q7L3B6 337 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 BCL11BQ9C0K0 894 aaPredicted RBP14□□□□□ -0.17
PDE6C-201ENST00000371447 CNNM1Q9NRU3 951 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 TRMT112Q9UI30 125 aaKnown RBP14□□□□□ -0.17
PDE6C-201ENST00000371447 ZBTB1Q9Y2K1 713 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 GOLGB1Q14789 3259 aaKnown RBP14□□□□□ -0.17
PDE6C-201ENST00000371447 EYA2O00167 538 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 CASP7P55210 303 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 ST3GAL1Q11201 340 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 ATG3Q9NT62 314 aa14□□□□□ -0.17
PDE6C-201ENST00000371447 KDM3BQ7LBC6 1761 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 STARD3NLO95772 234 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 F13A1P00488 732 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 CYP21A2P08686 494 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 MCMDC2Q4G0Z9 681 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 METTL24Q5JXM2 366 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 LDHAL6AQ6ZMR3 332 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 NCOA5Q9HCD5 579 aaKnown RBP13.99□□□□□ -0.17
PDE6C-201ENST00000371447 CACNA1FO60840 1977 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 ESPNB1AK53 854 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 EXOC5O00471 708 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 PTMAP06454 111 aaKnown RBP13.99□□□□□ -0.17
PDE6C-201ENST00000371447 IFIT5Q13325 482 aaKnown RBP13.99□□□□□ -0.17
PDE6C-201ENST00000371447 GIMAP6Q6P9H5 292 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 CLEC17AQ6ZS10 378 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 NEK1Q96PY6 1258 aa13.99□□□□□ -0.17
PDE6C-201ENST00000371447 APPP05067 770 aa13.98□□□□□ -0.17
PDE6C-201ENST00000371447 HCLS1P14317 486 aaPredicted RBP13.98□□□□□ -0.17
PDE6C-201ENST00000371447 SCARF1Q14162 830 aa13.98□□□□□ -0.17
PDE6C-201ENST00000371447 GPHNQ9NQX3 736 aaPredicted RBP13.98□□□□□ -0.17
PDE6C-201ENST00000371447 SOS2Q07890 1332 aaPredicted RBP13.98□□□□□ -0.17
PDE6C-201ENST00000371447 RPAP1Q9BWH6 1393 aaPredicted RBP13.98□□□□□ -0.17
PDE6C-201ENST00000371447 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
PDE6C-201ENST00000371447 TCIRG1Q13488 830 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms