RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CRAMP1Q96RY5 1269 aa18.74■□□□□ 0.59
COL9A1-204ENST00000370496 FER1L6Q2WGJ9 1857 aa18.73■□□□□ 0.59
COL9A1-204ENST00000370496 PPEF1O14829 653 aaPredicted RBP18.73■□□□□ 0.59
COL9A1-204ENST00000370496 TRIM27P14373 513 aa18.73■□□□□ 0.59
COL9A1-204ENST00000370496 SF3B3Q15393 1217 aaKnown RBP18.73■□□□□ 0.59
COL9A1-204ENST00000370496 SOGA3Q5TF21 947 aa18.73■□□□□ 0.59
COL9A1-204ENST00000370496 ZKSCAN2Q63HK3 967 aa18.73■□□□□ 0.59
COL9A1-204ENST00000370496 ARHGAP27Q6ZUM4 889 aa18.73■□□□□ 0.59
COL9A1-204ENST00000370496 RCAN3Q9UKA8 241 aa18.73■□□□□ 0.59
COL9A1-204ENST00000370496 LRRC37AA6NMS7 1700 aa18.72■□□□□ 0.59
COL9A1-204ENST00000370496 CCDC85AQ96PX6 553 aaPredicted RBP18.72■□□□□ 0.59
COL9A1-204ENST00000370496 CASP7P55210 303 aa18.71■□□□□ 0.59
COL9A1-204ENST00000370496 GRAPQ13588 217 aa18.71■□□□□ 0.59
COL9A1-204ENST00000370496 FTSJ3Q8IY81 847 aaKnown RBP18.71■□□□□ 0.59
COL9A1-204ENST00000370496 GRAPLQ8TC17 118 aaPredicted RBP18.71■□□□□ 0.59
COL9A1-204ENST00000370496 COL4A1P02462 1669 aa18.71■□□□□ 0.59
COL9A1-204ENST00000370496 CCDC93Q567U6 631 aa18.7■□□□□ 0.58
COL9A1-204ENST00000370496 CLUAP1Q96AJ1 413 aa18.7■□□□□ 0.58
COL9A1-204ENST00000370496 PLA2G12BQ9BX93 195 aa18.7■□□□□ 0.58
COL9A1-204ENST00000370496 TMX4Q9H1E5 349 aaPredicted RBP18.7■□□□□ 0.58
COL9A1-204ENST00000370496 TIAM2Q8IVF5 1701 aa18.7■□□□□ 0.58
COL9A1-204ENST00000370496 NBPF7P0C2Y1 421 aaPredicted RBP18.68■□□□□ 0.58
COL9A1-204ENST00000370496 RASSF7Q02833 373 aa18.68■□□□□ 0.58
COL9A1-204ENST00000370496 TNNQ9UQP3 1299 aa18.68■□□□□ 0.58
COL9A1-204ENST00000370496 CHMP3Q9Y3E7 222 aa18.68■□□□□ 0.58
COL9A1-204ENST00000370496 RTL9Q8NET4 1388 aa18.68■□□□□ 0.58
COL9A1-204ENST00000370496 SBF1O95248 1867 aa18.68■□□□□ 0.58
COL9A1-204ENST00000370496 CCDC88AQ3V6T2 1871 aa18.68■□□□□ 0.58
COL9A1-204ENST00000370496 UTYO14607 1347 aa18.68■□□□□ 0.58
COL9A1-204ENST00000370496 FAM161AQ3B820 660 aa18.68■□□□□ 0.58
COL9A1-204ENST00000370496 OLFM4Q6UX06 510 aa18.68■□□□□ 0.58
COL9A1-204ENST00000370496 TTLL11Q8NHH1 800 aa18.68■□□□□ 0.58
COL9A1-204ENST00000370496 CELF1Q92879 486 aaKnown RBP18.68■□□□□ 0.58
COL9A1-204ENST00000370496 TAOK3Q9H2K8 898 aa18.68■□□□□ 0.58
COL9A1-204ENST00000370496 GREM2Q9H772 168 aa18.68■□□□□ 0.58
COL9A1-204ENST00000370496 BBOX1O75936 387 aa18.67■□□□□ 0.58
COL9A1-204ENST00000370496 INTS3Q68E01 1043 aaKnown RBP18.67■□□□□ 0.58
COL9A1-204ENST00000370496 TMC4Q7Z404 712 aa18.67■□□□□ 0.58
COL9A1-204ENST00000370496 CDC5LQ99459 802 aaKnown RBP18.67■□□□□ 0.58
COL9A1-204ENST00000370496 SEC31BQ9NQW1 1179 aa18.67■□□□□ 0.58
COL9A1-204ENST00000370496 NFKBIEO00221 500 aa18.66■□□□□ 0.58
COL9A1-204ENST00000370496 UBTFL1P0CB47 393 aaPredicted RBP18.66■□□□□ 0.58
COL9A1-204ENST00000370496 CC2D2BQ6DHV5 1058 aa18.66■□□□□ 0.58
COL9A1-204ENST00000370496 RTKN2Q8IZC4 609 aa18.66■□□□□ 0.58
COL9A1-204ENST00000370496 C7orf43Q8WVR3 580 aa18.66■□□□□ 0.58
COL9A1-204ENST00000370496 SUCLG2Q96I99 432 aa18.66■□□□□ 0.58
COL9A1-204ENST00000370496 ATP6V0A2Q9Y487 856 aa18.66■□□□□ 0.58
COL9A1-204ENST00000370496 FOXO4P98177 505 aa18.65■□□□□ 0.58
COL9A1-204ENST00000370496 SLC51AQ86UW1 340 aa18.65■□□□□ 0.58
COL9A1-204ENST00000370496 ANKRD18AQ8IVF6 992 aa18.65■□□□□ 0.58
COL9A1-204ENST00000370496 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
COL9A1-204ENST00000370496 USP44Q9H0E7 712 aa18.65■□□□□ 0.58
COL9A1-204ENST00000370496 SNED1Q8TER0 1413 aa18.64■□□□□ 0.57
COL9A1-204ENST00000370496 LTBP3Q9NS15 1303 aa18.64■□□□□ 0.57
COL9A1-204ENST00000370496 ITGA6P23229 1130 aa18.64■□□□□ 0.57
COL9A1-204ENST00000370496 LMBR1LQ6UX01 489 aa18.64■□□□□ 0.57
COL9A1-204ENST00000370496 ITPRIPQ8IWB1 547 aa18.64■□□□□ 0.57
COL9A1-204ENST00000370496 TMEM57Q8N5G2 664 aa18.64■□□□□ 0.57
COL9A1-204ENST00000370496 BICC1Q9H694 974 aaKnown RBP18.64■□□□□ 0.57
COL9A1-204ENST00000370496 DICER1Q9UPY3 1922 aaKnown RBP18.63■□□□□ 0.57
COL9A1-204ENST00000370496 CSF1RP07333 972 aa18.63■□□□□ 0.57
COL9A1-204ENST00000370496 MS4A1P11836 297 aa18.63■□□□□ 0.57
COL9A1-204ENST00000370496 RPS8P62241 208 aaKnown RBP18.63■□□□□ 0.57
COL9A1-204ENST00000370496 FKBP4Q02790 459 aaKnown RBP eCLIP18.63■□□□□ 0.57
COL9A1-204ENST00000370496 GRIPAP1Q4V328 841 aa18.63■□□□□ 0.57
COL9A1-204ENST00000370496 EPHA10Q5JZY3 1008 aa18.63■□□□□ 0.57
COL9A1-204ENST00000370496 SP8Q8IXZ3 490 aa18.63■□□□□ 0.57
COL9A1-204ENST00000370496 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.63■□□□□ 0.57
COL9A1-204ENST00000370496 MEIS3Q99687 375 aa18.63■□□□□ 0.57
COL9A1-204ENST00000370496 RNF181Q9P0P0 153 aa18.63■□□□□ 0.57
COL9A1-204ENST00000370496 LTBP1Q14766 1721 aa18.63■□□□□ 0.57
COL9A1-204ENST00000370496 ANKRD18BA2A2Z9 1011 aa18.62■□□□□ 0.57
COL9A1-204ENST00000370496 LMNB1P20700 586 aa18.62■□□□□ 0.57
COL9A1-204ENST00000370496 YY1P25490 414 aa18.62■□□□□ 0.57
COL9A1-204ENST00000370496 IGHMBP2P38935 993 aaKnown RBP18.62■□□□□ 0.57
COL9A1-204ENST00000370496 IFIT5Q13325 482 aaKnown RBP18.62■□□□□ 0.57
COL9A1-204ENST00000370496 TAF7LQ5H9L4 462 aa18.62■□□□□ 0.57
COL9A1-204ENST00000370496 HDAC5Q9UQL6 1122 aa18.62■□□□□ 0.57
COL9A1-204ENST00000370496 A0A1B0GUL6 1792 aa18.62■□□□□ 0.57
COL9A1-204ENST00000370496 DUOX1Q9NRD9 1551 aa18.62■□□□□ 0.57
COL9A1-204ENST00000370496 GNAI3P08754 354 aa18.61■□□□□ 0.57
COL9A1-204ENST00000370496 CCDC57Q2TAC2 916 aa18.61■□□□□ 0.57
COL9A1-204ENST00000370496 C9orf131Q5VYM1 1079 aa18.61■□□□□ 0.57
COL9A1-204ENST00000370496 DPP8Q6V1X1 898 aaPredicted RBP18.61■□□□□ 0.57
COL9A1-204ENST00000370496 KAZALD1Q96I82 304 aa18.61■□□□□ 0.57
COL9A1-204ENST00000370496 PLIN1O60240 522 aa18.6■□□□□ 0.57
COL9A1-204ENST00000370496 RLBP1P12271 317 aa18.6■□□□□ 0.57
COL9A1-204ENST00000370496 PANK1Q8TE04 598 aa18.6■□□□□ 0.57
COL9A1-204ENST00000370496 PSMD1Q99460 953 aa18.6■□□□□ 0.57
COL9A1-204ENST00000370496 MPHOSPH8Q99549 860 aa18.6■□□□□ 0.57
COL9A1-204ENST00000370496 LRRFIP2Q9Y608 721 aaKnown RBP18.6■□□□□ 0.57
COL9A1-204ENST00000370496 RABL6Q3YEC7 729 aaPredicted RBP18.59■□□□□ 0.57
COL9A1-204ENST00000370496 MPNDQ8N594 471 aa18.59■□□□□ 0.57
COL9A1-204ENST00000370496 ANKRD44Q8N8A2 993 aa18.59■□□□□ 0.57
COL9A1-204ENST00000370496 ZNF277Q9NRM2 450 aaPredicted RBP18.59■□□□□ 0.57
COL9A1-204ENST00000370496 PRELPP51888 382 aa18.57■□□□□ 0.56
COL9A1-204ENST00000370496 SUPT20HQ8NEM7 779 aa18.57■□□□□ 0.56
COL9A1-204ENST00000370496 BSDC1Q9NW68 430 aaPredicted RBP18.57■□□□□ 0.56
COL9A1-204ENST00000370496 ANKIB1Q9P2G1 1089 aa18.57■□□□□ 0.56
COL9A1-204ENST00000370496 NSFL1CQ9UNZ2 370 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms