RNA–Protein interactions for RNA: ENST00000370336.4

DDX43-201, Transcript of DEAD-box helicase 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX43, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43-201ENST00000370336 ATP10DQ9P241 1426 aa16.55■□□□□ 0.24
DDX43-201ENST00000370336 BRD2P25440 801 aaKnown RBP16.55■□□□□ 0.24
DDX43-201ENST00000370336 DDIT3P35638 169 aa16.55■□□□□ 0.24
DDX43-201ENST00000370336 CCT4P50991 539 aaKnown RBP16.55■□□□□ 0.24
DDX43-201ENST00000370336 USPL1Q5W0Q7 1092 aa16.55■□□□□ 0.24
DDX43-201ENST00000370336 SRCIN1Q9C0H9 1055 aa16.55■□□□□ 0.24
DDX43-201ENST00000370336 A0A087WZG4 1122 aa16.55■□□□□ 0.24
DDX43-201ENST00000370336 GIGYF2Q6Y7W6 1299 aaKnown RBP16.55■□□□□ 0.24
DDX43-201ENST00000370336 ZFP91Q96JP5 570 aaPredicted RBP16.55■□□□□ 0.24
DDX43-201ENST00000370336 GPTP24298 496 aa16.54■□□□□ 0.24
DDX43-201ENST00000370336 SSFA2P28290 1259 aa16.54■□□□□ 0.24
DDX43-201ENST00000370336 RFC4P35249 363 aa16.54■□□□□ 0.24
DDX43-201ENST00000370336 NEXNQ0ZGT2 675 aa16.54■□□□□ 0.24
DDX43-201ENST00000370336 ERVV-1B6SEH8 477 aa16.54■□□□□ 0.24
DDX43-201ENST00000370336 HDAC1Q13547 482 aaPredicted RBP16.54■□□□□ 0.24
DDX43-201ENST00000370336 LINS1Q8NG48 757 aa16.54■□□□□ 0.24
DDX43-201ENST00000370336 BCL2L12Q9HB09 334 aa16.54■□□□□ 0.24
DDX43-201ENST00000370336 NARFQ9UHQ1 456 aa16.54■□□□□ 0.24
DDX43-201ENST00000370336 ZKSCAN5Q9Y2L8 839 aa16.54■□□□□ 0.24
DDX43-201ENST00000370336 NEURL1BA8MQ27 555 aa16.53■□□□□ 0.24
DDX43-201ENST00000370336 SLC15A2Q16348 729 aa16.53■□□□□ 0.24
DDX43-201ENST00000370336 MEIS3Q99687 375 aa16.53■□□□□ 0.24
DDX43-201ENST00000370336 DDX19BQ9UMR2 479 aa16.53■□□□□ 0.24
DDX43-201ENST00000370336 USP42Q9H9J4 1324 aaKnown RBP16.53■□□□□ 0.24
DDX43-201ENST00000370336 TCIRG1Q13488 830 aa16.53■□□□□ 0.24
DDX43-201ENST00000370336 COL23A1Q86Y22 540 aaPredicted RBP16.53■□□□□ 0.24
DDX43-201ENST00000370336 PNPLA7Q6ZV29 1317 aa16.53■□□□□ 0.24
DDX43-201ENST00000370336 ZBTB7BO15156 539 aaPredicted RBP16.52■□□□□ 0.24
DDX43-201ENST00000370336 ZPR1O75312 459 aa16.52■□□□□ 0.24
DDX43-201ENST00000370336 CBX1P83916 185 aa16.52■□□□□ 0.24
DDX43-201ENST00000370336 MYRIPQ8NFW9 859 aa16.52■□□□□ 0.24
DDX43-201ENST00000370336 STK32BQ9NY57 414 aa16.52■□□□□ 0.24
DDX43-201ENST00000370336 CIZ1Q9ULV3 898 aaPredicted RBP16.52■□□□□ 0.24
DDX43-201ENST00000370336 ADRA2BP18089 450 aa16.52■□□□□ 0.23
DDX43-201ENST00000370336 RBM25P49756 843 aaKnown RBP16.52■□□□□ 0.23
DDX43-201ENST00000370336 JARID2Q92833 1246 aaPredicted RBP16.52■□□□□ 0.23
DDX43-201ENST00000370336 LNPKQ9C0E8 428 aa16.52■□□□□ 0.23
DDX43-201ENST00000370336 C1orf115Q9H7X2 142 aa16.52■□□□□ 0.23
DDX43-201ENST00000370336 SMC5Q8IY18 1101 aa16.51■□□□□ 0.23
DDX43-201ENST00000370336 PDLIM2Q96JY6 352 aa16.51■□□□□ 0.23
DDX43-201ENST00000370336 ISCA1Q9BUE6 129 aa16.51■□□□□ 0.23
DDX43-201ENST00000370336 UBN2Q6ZU65 1347 aa16.51■□□□□ 0.23
DDX43-201ENST00000370336 HMGB2P26583 209 aaKnown RBP16.51■□□□□ 0.23
DDX43-201ENST00000370336 RAB3GAP1Q15042 981 aa16.51■□□□□ 0.23
DDX43-201ENST00000370336 BICDL1Q6ZP65 573 aa16.51■□□□□ 0.23
DDX43-201ENST00000370336 SNX21Q969T3 373 aa16.51■□□□□ 0.23
DDX43-201ENST00000370336 USP44Q9H0E7 712 aa16.51■□□□□ 0.23
DDX43-201ENST00000370336 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.51■□□□□ 0.23
DDX43-201ENST00000370336 NBPF7P0C2Y1 421 aaPredicted RBP16.5■□□□□ 0.23
DDX43-201ENST00000370336 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
DDX43-201ENST00000370336 GCKRQ14397 625 aa16.5■□□□□ 0.23
DDX43-201ENST00000370336 TBC1D9BQ66K14 1250 aa16.5■□□□□ 0.23
DDX43-201ENST00000370336 DNAJC2Q99543 621 aaKnown RBP16.5■□□□□ 0.23
DDX43-201ENST00000370336 PDGFDQ9GZP0 370 aaPredicted RBP16.5■□□□□ 0.23
DDX43-201ENST00000370336 QSER1Q2KHR3 1735 aa16.49■□□□□ 0.23
DDX43-201ENST00000370336 FAM177BA6PVY3 158 aa16.49■□□□□ 0.23
DDX43-201ENST00000370336 IRX3P78415 501 aaPredicted RBP16.49■□□□□ 0.23
DDX43-201ENST00000370336 ZNF34Q8IZ26 560 aa16.49■□□□□ 0.23
DDX43-201ENST00000370336 CGNQ9P2M7 1197 aaKnown RBP16.49■□□□□ 0.23
DDX43-201ENST00000370336 NIP7Q9Y221 180 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDX43-201ENST00000370336 CD2BP2O95400 341 aaKnown RBP16.49■□□□□ 0.23
DDX43-201ENST00000370336 GYS1P13807 737 aa16.49■□□□□ 0.23
DDX43-201ENST00000370336 HMGN5P82970 282 aaKnown RBP16.49■□□□□ 0.23
DDX43-201ENST00000370336 HSP90AB3PQ58FF7 597 aa16.49■□□□□ 0.23
DDX43-201ENST00000370336 NLRP10Q86W26 655 aa16.49■□□□□ 0.23
DDX43-201ENST00000370336 PRIMPOLQ96LW4 560 aa16.49■□□□□ 0.23
DDX43-201ENST00000370336 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
DDX43-201ENST00000370336 CWC25Q9NXE8 425 aaPredicted RBP16.49■□□□□ 0.23
DDX43-201ENST00000370336 C9orf78Q9NZ63 289 aaPredicted RBP16.49■□□□□ 0.23
DDX43-201ENST00000370336 ZNF652Q9Y2D9 606 aa16.49■□□□□ 0.23
DDX43-201ENST00000370336 GTF2F1P35269 517 aaKnown RBP eCLIP16.48■□□□□ 0.23
DDX43-201ENST00000370336 CLEC4GQ6UXB4 293 aa16.48■□□□□ 0.23
DDX43-201ENST00000370336 GRM8O00222 908 aa16.47■□□□□ 0.23
DDX43-201ENST00000370336 CCDC191Q8NCU4 936 aa16.47■□□□□ 0.23
DDX43-201ENST00000370336 UBE3BQ7Z3V4 1068 aa16.47■□□□□ 0.23
DDX43-201ENST00000370336 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
DDX43-201ENST00000370336 NUCB1Q02818 461 aa16.46■□□□□ 0.23
DDX43-201ENST00000370336 SUSD4Q5VX71 490 aa16.46■□□□□ 0.23
DDX43-201ENST00000370336 UBTFL1P0CB47 393 aaPredicted RBP16.46■□□□□ 0.22
DDX43-201ENST00000370336 TRIM28Q13263 835 aaKnown RBP16.46■□□□□ 0.22
DDX43-201ENST00000370336 MSL1Q68DK7 614 aa16.46■□□□□ 0.22
DDX43-201ENST00000370336 FLAD1Q8NFF5 587 aa16.46■□□□□ 0.22
DDX43-201ENST00000370336 FAM89AQ96GI7 184 aa16.46■□□□□ 0.22
DDX43-201ENST00000370336 KIF2CQ99661 725 aa16.46■□□□□ 0.22
DDX43-201ENST00000370336 COL24A1Q17RW2 1714 aa16.45■□□□□ 0.22
DDX43-201ENST00000370336 CCDC39Q9UFE4 941 aa16.45■□□□□ 0.22
DDX43-201ENST00000370336 LRRFIP2Q9Y608 721 aaKnown RBP16.45■□□□□ 0.22
DDX43-201ENST00000370336 NFIXQ14938 502 aa16.45■□□□□ 0.22
DDX43-201ENST00000370336 CHD1LQ86WJ1 897 aa16.45■□□□□ 0.22
DDX43-201ENST00000370336 GNAI3P08754 354 aa16.44■□□□□ 0.22
DDX43-201ENST00000370336 ZNF445P59923 1031 aa16.44■□□□□ 0.22
DDX43-201ENST00000370336 ATP2B3Q16720 1220 aa16.44■□□□□ 0.22
DDX43-201ENST00000370336 RGS22Q8NE09 1264 aa16.44■□□□□ 0.22
DDX43-201ENST00000370336 SUCLG2Q96I99 432 aa16.44■□□□□ 0.22
DDX43-201ENST00000370336 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
DDX43-201ENST00000370336 UTYO14607 1347 aa16.44■□□□□ 0.22
DDX43-201ENST00000370336 GOLGA6L22H0YM25 854 aa16.44■□□□□ 0.22
DDX43-201ENST00000370336 CASP7P55210 303 aa16.44■□□□□ 0.22
DDX43-201ENST00000370336 IRX5P78411 483 aaPredicted RBP16.44■□□□□ 0.22
DDX43-201ENST00000370336 KLHL40Q2TBA0 621 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms