RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 FOXD4L6Q3SYB3 417 aaPredicted RBP20.65■□□□□ 0.9
RTCA-203ENST00000370128 FOXD4L3Q6VB84 417 aaPredicted RBP20.65■□□□□ 0.9
RTCA-203ENST00000370128 KCNB2Q92953 911 aa20.65■□□□□ 0.9
RTCA-203ENST00000370128 ADCK5Q3MIX3 580 aa20.64■□□□□ 0.9
RTCA-203ENST00000370128 XAGE3Q8WTP9 111 aa20.64■□□□□ 0.9
RTCA-203ENST00000370128 DDX17Q92841 729 aaKnown RBP20.64■□□□□ 0.9
RTCA-203ENST00000370128 ZNF622Q969S3 477 aaKnown RBP eCLIP20.64■□□□□ 0.9
RTCA-203ENST00000370128 ZNF496Q96IT1 587 aaPredicted RBP20.64■□□□□ 0.9
RTCA-203ENST00000370128 CCDC8Q9H0W5 538 aaPredicted RBP20.64■□□□□ 0.9
RTCA-203ENST00000370128 PTMAP06454 111 aaKnown RBP20.64■□□□□ 0.89
RTCA-203ENST00000370128 GCKRQ14397 625 aa20.64■□□□□ 0.89
RTCA-203ENST00000370128 PRPF40BQ6NWY9 871 aaKnown RBP20.64■□□□□ 0.89
RTCA-203ENST00000370128 COPS6Q7L5N1 327 aa20.64■□□□□ 0.89
RTCA-203ENST00000370128 GDPD2Q9HCC8 539 aa20.64■□□□□ 0.89
RTCA-203ENST00000370128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.64■□□□□ 0.891e-6■■■□□ 15.7
RTCA-203ENST00000370128 NEXNQ0ZGT2 675 aa20.63■□□□□ 0.89
RTCA-203ENST00000370128 NECTIN1Q15223 517 aa20.63■□□□□ 0.89
RTCA-203ENST00000370128 SIL1Q9H173 461 aa20.63■□□□□ 0.89
RTCA-203ENST00000370128 TLR7Q9NYK1 1049 aaKnown RBP20.63■□□□□ 0.89
RTCA-203ENST00000370128 KLHDC4Q8TBB5 520 aa20.63■□□□□ 0.89
RTCA-203ENST00000370128 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.63■□□□□ 0.89
RTCA-203ENST00000370128 CCDC171Q6TFL3 1326 aa20.63■□□□□ 0.89
RTCA-203ENST00000370128 LARGE1O95461 756 aa20.62■□□□□ 0.89
RTCA-203ENST00000370128 LRP10Q7Z4F1 713 aa20.62■□□□□ 0.89
RTCA-203ENST00000370128 IFNL2Q8IZJ0 200 aa20.62■□□□□ 0.89
RTCA-203ENST00000370128 JAKMIP1Q96N16 626 aaKnown RBP20.62■□□□□ 0.89
RTCA-203ENST00000370128 METTL22Q9BUU2 404 aaPredicted RBP20.62■□□□□ 0.89
RTCA-203ENST00000370128 TM6SF1Q9BZW5 370 aa20.62■□□□□ 0.89
RTCA-203ENST00000370128 ZSWIM6Q9HCJ5 1215 aa20.62■□□□□ 0.89
RTCA-203ENST00000370128 GADD45BO75293 160 aaPredicted RBP20.62■□□□□ 0.89
RTCA-203ENST00000370128 EPHA10Q5JZY3 1008 aa20.62■□□□□ 0.89
RTCA-203ENST00000370128 VPS53Q5VIR6 699 aa20.62■□□□□ 0.89
RTCA-203ENST00000370128 USP48Q86UV5 1035 aa20.62■□□□□ 0.89
RTCA-203ENST00000370128 FAM227BQ96M60 508 aa20.62■□□□□ 0.89
RTCA-203ENST00000370128 COL18A1P39060 1754 aa20.61■□□□□ 0.89
RTCA-203ENST00000370128 MYD88Q99836 296 aa20.61■□□□□ 0.89
RTCA-203ENST00000370128 FEZ2Q9UHY8 353 aaPredicted RBP20.61■□□□□ 0.89
RTCA-203ENST00000370128 USP16Q9Y5T5 823 aa20.61■□□□□ 0.89
RTCA-203ENST00000370128 ZSCAN22P10073 491 aaPredicted RBP20.61■□□□□ 0.89
RTCA-203ENST00000370128 SYT1P21579 422 aa20.61■□□□□ 0.89
RTCA-203ENST00000370128 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.6■□□□□ 0.89
RTCA-203ENST00000370128 NMIQ13287 307 aaPredicted RBP20.6■□□□□ 0.89
RTCA-203ENST00000370128 SNRKQ9NRH2 765 aa20.6■□□□□ 0.89
RTCA-203ENST00000370128 PDRG1Q9NUG6 133 aa20.6■□□□□ 0.89
RTCA-203ENST00000370128 HIP1O00291 1037 aa20.6■□□□□ 0.89
RTCA-203ENST00000370128 CTIFO43310 598 aaKnown RBP20.6■□□□□ 0.89
RTCA-203ENST00000370128 STX6O43752 255 aa20.6■□□□□ 0.89
RTCA-203ENST00000370128 ATF3P18847 181 aa20.6■□□□□ 0.89
RTCA-203ENST00000370128 MAP4K1Q92918 833 aa20.6■□□□□ 0.89
RTCA-203ENST00000370128 SPTLC3Q9NUV7 552 aa20.6■□□□□ 0.89
RTCA-203ENST00000370128 TCHHQ07283 1943 aa20.6■□□□□ 0.89
RTCA-203ENST00000370128 MRC1P22897 1456 aa20.59■□□□□ 0.89
RTCA-203ENST00000370128 CYP27B1O15528 508 aa20.59■□□□□ 0.89
RTCA-203ENST00000370128 ANKRD13DQ6ZTN6 518 aa20.59■□□□□ 0.89
RTCA-203ENST00000370128 TMEM87AQ8NBN3 555 aa20.59■□□□□ 0.89
RTCA-203ENST00000370128 CABLES1Q8TDN4 633 aa20.59■□□□□ 0.89
RTCA-203ENST00000370128 BOLA2Q9H3K6 86 aa20.59■□□□□ 0.89
RTCA-203ENST00000370128 SMC3Q9UQE7 1217 aa20.59■□□□□ 0.89
RTCA-203ENST00000370128 RBM8AQ9Y5S9 174 aaKnown RBP20.59■□□□□ 0.89
RTCA-203ENST00000370128 CYP46A1Q9Y6A2 500 aa20.59■□□□□ 0.89
RTCA-203ENST00000370128 ABCC6O95255 1503 aa20.59■□□□□ 0.89
RTCA-203ENST00000370128 SNRPA1P09661 255 aaKnown RBP20.59■□□□□ 0.89
RTCA-203ENST00000370128 DCAF5Q96JK2 942 aa20.59■□□□□ 0.89
RTCA-203ENST00000370128 CTNNA3Q9UI47 895 aa20.59■□□□□ 0.89
RTCA-203ENST00000370128 DDX41Q9UJV9 622 aaKnown RBP20.59■□□□□ 0.89
RTCA-203ENST00000370128 CSB-PGBD3P0DP91 1061 aa20.58■□□□□ 0.89
RTCA-203ENST00000370128 CREB3L3Q68CJ9 461 aa20.58■□□□□ 0.89
RTCA-203ENST00000370128 SYAP1Q96A49 352 aaPredicted RBP20.58■□□□□ 0.89
RTCA-203ENST00000370128 TMEM94Q12767 1356 aa20.58■□□□□ 0.88
RTCA-203ENST00000370128 ZKSCAN1P17029 563 aaPredicted RBP20.58■□□□□ 0.88
RTCA-203ENST00000370128 PIP4K2AP48426 406 aaPredicted RBP20.58■□□□□ 0.88
RTCA-203ENST00000370128 A0A0D9SFI3 127 aa20.57■□□□□ 0.88
RTCA-203ENST00000370128 CCDC83Q8IWF9 413 aa20.57■□□□□ 0.88
RTCA-203ENST00000370128 TTC5Q8N0Z6 440 aa20.57■□□□□ 0.88
RTCA-203ENST00000370128 CHRNA2Q15822 529 aa20.57■□□□□ 0.88
RTCA-203ENST00000370128 ZSCAN31Q96LW9 406 aaPredicted RBP20.57■□□□□ 0.88
RTCA-203ENST00000370128 COPRSQ9NQ92 184 aa20.57■□□□□ 0.88
RTCA-203ENST00000370128 SH2B1Q9NRF2 756 aaPredicted RBP20.57■□□□□ 0.88
RTCA-203ENST00000370128 CNPY2Q9Y2B0 182 aa20.57■□□□□ 0.88
RTCA-203ENST00000370128 MORC2Q9Y6X9 1032 aaPredicted RBP20.57■□□□□ 0.88
RTCA-203ENST00000370128 DDX54Q8TDD1 881 aaKnown RBP20.56■□□□□ 0.88
RTCA-203ENST00000370128 FSD1Q9BTV5 496 aa20.56■□□□□ 0.88
RTCA-203ENST00000370128 F13A1P00488 732 aa20.56■□□□□ 0.88
RTCA-203ENST00000370128 ST3GAL1Q11201 340 aa20.56■□□□□ 0.88
RTCA-203ENST00000370128 FMNL2Q96PY5 1086 aa20.56■□□□□ 0.88
RTCA-203ENST00000370128 RIOK3O14730 519 aaKnown RBP20.55■□□□□ 0.88
RTCA-203ENST00000370128 GJB2P29033 226 aa20.55■□□□□ 0.88
RTCA-203ENST00000370128 RFX5P48382 616 aaPredicted RBP20.55■□□□□ 0.88
RTCA-203ENST00000370128 PLEKHG2Q9H7P9 1386 aa20.55■□□□□ 0.88
RTCA-203ENST00000370128 SLC27A2O14975 620 aa20.55■□□□□ 0.88
RTCA-203ENST00000370128 ME3Q16798 604 aa20.55■□□□□ 0.88
RTCA-203ENST00000370128 MED23Q9ULK4 1368 aa20.55■□□□□ 0.88
RTCA-203ENST00000370128 LOC102724159A0A0B4J2E5 919 aa20.54■□□□□ 0.88
RTCA-203ENST00000370128 FAM193AP78312 1265 aa20.54■□□□□ 0.88
RTCA-203ENST00000370128 PTPN12Q05209 780 aaKnown RBP20.54■□□□□ 0.88
RTCA-203ENST00000370128 COL9A3Q14050 684 aaPredicted RBP20.54■□□□□ 0.88
RTCA-203ENST00000370128 PWP2Q15269 919 aaKnown RBP20.54■□□□□ 0.88
RTCA-203ENST00000370128 TSPY26PQ9H489 355 aa20.54■□□□□ 0.88
RTCA-203ENST00000370128 DCCP43146 1447 aa20.54■□□□□ 0.88
RTCA-203ENST00000370128 DTNBO60941 627 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms