RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 CDC37L1Q7L3B6 337 aa13.73□□□□□ -0.21
RAB39B-201ENST00000369454 ZCRB1Q8TBF4 217 aaKnown RBP13.73□□□□□ -0.21
RAB39B-201ENST00000369454 DDX11Q96FC9 970 aa13.73□□□□□ -0.21
RAB39B-201ENST00000369454 N4BP2Q86UW6 1770 aaPredicted RBP13.73□□□□□ -0.21
RAB39B-201ENST00000369454 IL17RAQ96F46 866 aa13.73□□□□□ -0.21
RAB39B-201ENST00000369454 COPRSQ9NQ92 184 aa13.73□□□□□ -0.21
RAB39B-201ENST00000369454 PSMA5P28066 241 aa13.73□□□□□ -0.21
RAB39B-201ENST00000369454 LRRC24Q50LG9 513 aa13.73□□□□□ -0.21
RAB39B-201ENST00000369454 TAF5LO75529 589 aa13.72□□□□□ -0.21
RAB39B-201ENST00000369454 PLBD2Q8NHP8 589 aa13.72□□□□□ -0.21
RAB39B-201ENST00000369454 SNRKQ9NRH2 765 aa13.72□□□□□ -0.21
RAB39B-201ENST00000369454 SPATA31A3Q5VYP0 1347 aa13.72□□□□□ -0.21
RAB39B-201ENST00000369454 ZNF142P52746 1687 aaPredicted RBP13.72□□□□□ -0.21
RAB39B-201ENST00000369454 EVA1CP58658 441 aa13.72□□□□□ -0.21
RAB39B-201ENST00000369454 USP25Q9UHP3 1055 aa13.72□□□□□ -0.21
RAB39B-201ENST00000369454 CAMK4Q16566 473 aa13.72□□□□□ -0.21
RAB39B-201ENST00000369454 OVOS2A0A0G2JMS6 1433 aa13.72□□□□□ -0.21
RAB39B-201ENST00000369454 JAK2O60674 1132 aa13.71□□□□□ -0.21
RAB39B-201ENST00000369454 CHST3Q7LGC8 479 aa13.71□□□□□ -0.21
RAB39B-201ENST00000369454 ZSCAN31Q96LW9 406 aaPredicted RBP13.71□□□□□ -0.21
RAB39B-201ENST00000369454 PUS3Q9BZE2 481 aaKnown RBP13.71□□□□□ -0.21
RAB39B-201ENST00000369454 SH2B1Q9NRF2 756 aaPredicted RBP13.71□□□□□ -0.21
RAB39B-201ENST00000369454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.21
RAB39B-201ENST00000369454 C5P01031 1676 aa13.71□□□□□ -0.21
RAB39B-201ENST00000369454 TRPM3Q9HCF6 1732 aaPredicted RBP13.71□□□□□ -0.21
RAB39B-201ENST00000369454 A0A0G2JLW4 131 aa13.71□□□□□ -0.21
RAB39B-201ENST00000369454 ZNF830Q96NB3 372 aaPredicted RBP13.71□□□□□ -0.21
RAB39B-201ENST00000369454 ATP6V1DQ9Y5K8 247 aa13.71□□□□□ -0.21
RAB39B-201ENST00000369454 RPS6KB1P23443 525 aa13.7□□□□□ -0.22
RAB39B-201ENST00000369454 CEBPZQ03701 1054 aaKnown RBP13.7□□□□□ -0.22
RAB39B-201ENST00000369454 HSP90AB3PQ58FF7 597 aa13.7□□□□□ -0.22
RAB39B-201ENST00000369454 BRINP3Q76B58 766 aa13.7□□□□□ -0.22
RAB39B-201ENST00000369454 TM6SF1Q9BZW5 370 aa13.7□□□□□ -0.22
RAB39B-201ENST00000369454 COL15A1P39059 1388 aa13.7□□□□□ -0.22
RAB39B-201ENST00000369454 ATP5JP18859 108 aa13.7□□□□□ -0.22
RAB39B-201ENST00000369454 FKBP4Q02790 459 aaKnown RBP eCLIP13.7□□□□□ -0.22
RAB39B-201ENST00000369454 TOB2Q14106 344 aaPredicted RBP13.7□□□□□ -0.22
RAB39B-201ENST00000369454 CWC25Q9NXE8 425 aaPredicted RBP13.7□□□□□ -0.22
RAB39B-201ENST00000369454 ADAMTSL3P82987 1691 aa13.7□□□□□ -0.22
RAB39B-201ENST00000369454 UBE2HP62256 183 aa13.7□□□□□ -0.22
RAB39B-201ENST00000369454 PHF14O94880 888 aa13.69□□□□□ -0.22
RAB39B-201ENST00000369454 CCDC183Q5T5S1 534 aa13.69□□□□□ -0.22
RAB39B-201ENST00000369454 Q6ZUG5 572 aa13.69□□□□□ -0.22
RAB39B-201ENST00000369454 PHRF1Q9P1Y6 1649 aaKnown RBP13.69□□□□□ -0.22
RAB39B-201ENST00000369454 CYP21A2P08686 494 aa13.69□□□□□ -0.22
RAB39B-201ENST00000369454 BRF1Q92994 677 aa13.69□□□□□ -0.22
RAB39B-201ENST00000369454 TNS3Q68CZ2 1445 aa13.69□□□□□ -0.22
RAB39B-201ENST00000369454 FOXO4P98177 505 aa13.69□□□□□ -0.22
RAB39B-201ENST00000369454 SYNE4Q8N205 404 aa13.69□□□□□ -0.22
RAB39B-201ENST00000369454 NEK1Q96PY6 1258 aa13.69□□□□□ -0.22
RAB39B-201ENST00000369454 GORABQ5T7V8 394 aa13.68□□□□□ -0.22
RAB39B-201ENST00000369454 SYTL4Q96C24 671 aaPredicted RBP13.68□□□□□ -0.22
RAB39B-201ENST00000369454 FAM89AQ96GI7 184 aa13.68□□□□□ -0.22
RAB39B-201ENST00000369454 GPTP24298 496 aa13.68□□□□□ -0.22
RAB39B-201ENST00000369454 MED23Q9ULK4 1368 aa13.68□□□□□ -0.22
RAB39B-201ENST00000369454 ZNF609O15014 1411 aa13.68□□□□□ -0.22
RAB39B-201ENST00000369454 CASP7P55210 303 aa13.68□□□□□ -0.22
RAB39B-201ENST00000369454 CCT2P78371 535 aaKnown RBP13.68□□□□□ -0.22
RAB39B-201ENST00000369454 RABL6Q3YEC7 729 aaPredicted RBP13.68□□□□□ -0.22
RAB39B-201ENST00000369454 MCMDC2Q4G0Z9 681 aa13.68□□□□□ -0.22
RAB39B-201ENST00000369454 PDLIM2Q96JY6 352 aa13.68□□□□□ -0.22
RAB39B-201ENST00000369454 GOLGA6L4A6NEF3 574 aa13.67□□□□□ -0.22
RAB39B-201ENST00000369454 TTC6Q86TZ1 520 aa13.67□□□□□ -0.22
RAB39B-201ENST00000369454 PAG1Q9NWQ8 432 aa13.67□□□□□ -0.22
RAB39B-201ENST00000369454 ATG9AQ7Z3C6 839 aa13.67□□□□□ -0.22
RAB39B-201ENST00000369454 CKAP2LQ8IYA6 745 aa13.67□□□□□ -0.22
RAB39B-201ENST00000369454 KCNB2Q92953 911 aa13.67□□□□□ -0.22
RAB39B-201ENST00000369454 R3HCC1Q9Y3T6 440 aaKnown RBP13.67□□□□□ -0.22
RAB39B-201ENST00000369454 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
RAB39B-201ENST00000369454 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
RAB39B-201ENST00000369454 IFIT1P09914 478 aaKnown RBP13.67□□□□□ -0.22
RAB39B-201ENST00000369454 TAF7LQ5H9L4 462 aa13.67□□□□□ -0.22
RAB39B-201ENST00000369454 HAUS7Q99871 368 aa13.67□□□□□ -0.22
RAB39B-201ENST00000369454 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.67□□□□□ -0.22
RAB39B-201ENST00000369454 A0A1B0GUL7 405 aa13.66□□□□□ -0.22
RAB39B-201ENST00000369454 IL2RBP14784 551 aa13.66□□□□□ -0.22
RAB39B-201ENST00000369454 HAND2P61296 217 aa13.66□□□□□ -0.22
RAB39B-201ENST00000369454 ASAP1Q9ULH1 1129 aa13.66□□□□□ -0.22
RAB39B-201ENST00000369454 WDR17Q8IZU2 1322 aa13.66□□□□□ -0.22
RAB39B-201ENST00000369454 H7C1W4 665 aa13.66□□□□□ -0.22
RAB39B-201ENST00000369454 KRT85P78386 507 aa13.66□□□□□ -0.22
RAB39B-201ENST00000369454 GUCY1B3Q02153 619 aa13.66□□□□□ -0.22
RAB39B-201ENST00000369454 TTLL5Q6EMB2 1281 aa13.66□□□□□ -0.22
RAB39B-201ENST00000369454 RAB11FIP4Q86YS3 637 aa13.66□□□□□ -0.22
RAB39B-201ENST00000369454 SIPA1L3O60292 1781 aaPredicted RBP13.66□□□□□ -0.22
RAB39B-201ENST00000369454 H3BQV1 296 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 LIG1P18858 919 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 ANKRD1Q15327 319 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 IFFO2Q5TF58 517 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 STOX1Q6ZVD7 989 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 KBTBD3Q8NAB2 608 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 NCOA5Q9HCD5 579 aaKnown RBP13.65□□□□□ -0.22
RAB39B-201ENST00000369454 APOBRQ0VD83 1088 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 WASHC4Q2M389 1173 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 PI16Q6UXB8 463 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 SCN11AQ9UI33 1791 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 ADORA1P30542 326 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 CCDC57Q2TAC2 916 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 DNAJC10Q8IXB1 793 aa13.65□□□□□ -0.22
RAB39B-201ENST00000369454 FAM184AQ8NB25 1140 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms