RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 SEPT11Q9NVA2 429 aaKnown RBP11.51□□□□□ -0.57
SIM1-202ENST00000369208 ATP8B1O43520 1251 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 ME1P48163 572 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 TTF1Q15361 905 aaPredicted RBP11.51□□□□□ -0.57
SIM1-202ENST00000369208 LARSQ9P2J5 1176 aaKnown RBP11.51□□□□□ -0.57
SIM1-202ENST00000369208 TNPO1Q92973 898 aaKnown RBP11.51□□□□□ -0.57
SIM1-202ENST00000369208 PHF8Q9UPP1 1060 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 ADGRL1O94910 1474 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
SIM1-202ENST00000369208 CCDC96Q2M329 555 aa11.5□□□□□ -0.57
SIM1-202ENST00000369208 ZGPATQ8N5A5 531 aaKnown RBP11.5□□□□□ -0.57
SIM1-202ENST00000369208 FERMT2Q96AC1 680 aa11.5□□□□□ -0.57
SIM1-202ENST00000369208 STIM2Q9P246 746 aa11.5□□□□□ -0.57
SIM1-202ENST00000369208 MYCNP04198 464 aaPredicted RBP11.5□□□□□ -0.57
SIM1-202ENST00000369208 KIAA0586Q9BVV6 1533 aa11.5□□□□□ -0.57
SIM1-202ENST00000369208 NAPBQ9H115 298 aa11.5□□□□□ -0.57
SIM1-202ENST00000369208 IQGAP2Q13576 1575 aa11.5□□□□□ -0.57
SIM1-202ENST00000369208 ANKRD62A6NC57 917 aa11.5□□□□□ -0.57
SIM1-202ENST00000369208 MCTP2Q6DN12 878 aa11.5□□□□□ -0.57
SIM1-202ENST00000369208 LRRC45Q96CN5 670 aa11.5□□□□□ -0.57
SIM1-202ENST00000369208 PABPN1LA6NDY0 278 aaKnown RBP11.5□□□□□ -0.57
SIM1-202ENST00000369208 C6orf229H3BNL8 230 aa11.5□□□□□ -0.57
SIM1-202ENST00000369208 EXOSC9Q06265 439 aaKnown RBP11.5□□□□□ -0.57
SIM1-202ENST00000369208 AFAP1L1Q8TED9 768 aa11.5□□□□□ -0.57
SIM1-202ENST00000369208 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
SIM1-202ENST00000369208 UBAP1LF5GYI3 381 aa11.49□□□□□ -0.57
SIM1-202ENST00000369208 SESN3P58005 492 aa11.49□□□□□ -0.57
SIM1-202ENST00000369208 PDCD7Q8N8D1 485 aaKnown RBP11.49□□□□□ -0.57
SIM1-202ENST00000369208 KIF4AO95239 1232 aa11.49□□□□□ -0.57
SIM1-202ENST00000369208 CCDC178Q5BJE1 867 aa11.49□□□□□ -0.57
SIM1-202ENST00000369208 TRMT112Q9UI30 125 aaKnown RBP11.49□□□□□ -0.57
SIM1-202ENST00000369208 VPS18Q9P253 973 aa11.49□□□□□ -0.57
SIM1-202ENST00000369208 OGFOD1Q8N543 542 aa11.49□□□□□ -0.57
SIM1-202ENST00000369208 TTC36A6NLP5 189 aa11.49□□□□□ -0.57
SIM1-202ENST00000369208 KDM4AO75164 1064 aa11.49□□□□□ -0.57
SIM1-202ENST00000369208 MPRIPQ6WCQ1 1025 aa11.49□□□□□ -0.57
SIM1-202ENST00000369208 PANK1Q8TE04 598 aa11.49□□□□□ -0.57
SIM1-202ENST00000369208 SCAND2PQ9GZW5 306 aaPredicted RBP11.49□□□□□ -0.57
SIM1-202ENST00000369208 TTC21BQ7Z4L5 1316 aa11.49□□□□□ -0.57
SIM1-202ENST00000369208 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
SIM1-202ENST00000369208 CASTP20810 708 aaKnown RBP11.48□□□□□ -0.57
SIM1-202ENST00000369208 IBSPP21815 317 aaPredicted RBP11.48□□□□□ -0.57
SIM1-202ENST00000369208 DDX19AQ9NUU7 478 aaKnown RBP11.48□□□□□ -0.57
SIM1-202ENST00000369208 NOB1Q9ULX3 412 aaKnown RBP11.48□□□□□ -0.57
SIM1-202ENST00000369208 TAF7Q15545 349 aaPredicted RBP11.48□□□□□ -0.57
SIM1-202ENST00000369208 NFE2L2Q16236 605 aa11.48□□□□□ -0.57
SIM1-202ENST00000369208 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.48□□□□□ -0.57
SIM1-202ENST00000369208 RPAP2Q8IXW5 612 aaPredicted RBP11.48□□□□□ -0.57
SIM1-202ENST00000369208 CHMP4BP1P59074 171 aa11.48□□□□□ -0.57
SIM1-202ENST00000369208 TAF4BQ92750 862 aa11.48□□□□□ -0.57
SIM1-202ENST00000369208 PYM1Q9BRP8 204 aaKnown RBP11.48□□□□□ -0.57
SIM1-202ENST00000369208 THEGQ9P2T0 379 aa11.48□□□□□ -0.57
SIM1-202ENST00000369208 KIF4BQ2VIQ3 1234 aa11.48□□□□□ -0.57
SIM1-202ENST00000369208 TAOK3Q9H2K8 898 aa11.48□□□□□ -0.57
SIM1-202ENST00000369208 DENND4BO75064 1496 aaPredicted RBP11.48□□□□□ -0.57
SIM1-202ENST00000369208 KIF1BPQ96EK5 621 aa11.48□□□□□ -0.57
SIM1-202ENST00000369208 TRIM6Q9C030 488 aaPredicted RBP11.48□□□□□ -0.57
SIM1-202ENST00000369208 TRIM35Q9UPQ4 493 aa11.48□□□□□ -0.57
SIM1-202ENST00000369208 PAFAH1B1P43034 410 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 PDE4BQ07343 736 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 GOPCQ9HD26 462 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 MAP3K9P80192 1104 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 FIBPO43427 364 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 PFDN1O60925 122 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 DYNC1I2Q13409 638 aaKnown RBP11.47□□□□□ -0.57
SIM1-202ENST00000369208 ARMC2Q8NEN0 867 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 PTCD1O75127 700 aaKnown RBP11.47□□□□□ -0.57
SIM1-202ENST00000369208 PPFIA2O75334 1257 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 UBE2HP62256 183 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 ANAPC4Q9UJX5 808 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 NBPF7P0C2Y1 421 aaPredicted RBP11.47□□□□□ -0.57
SIM1-202ENST00000369208 PCK1P35558 622 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 MAGEA9P43362 315 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 LRRD1A4D1F6 860 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 ITGB1BP2Q9UKP3 347 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 ZFXP17010 805 aaPredicted RBP11.47□□□□□ -0.57
SIM1-202ENST00000369208 USP6NLQ92738 828 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 TRIM7Q9C029 511 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 ADAMTS8Q9UP79 889 aa11.47□□□□□ -0.57
SIM1-202ENST00000369208 LMOD1P29536 600 aaPredicted RBP11.46□□□□□ -0.57
SIM1-202ENST00000369208 LIMCH1Q9UPQ0 1083 aa11.46□□□□□ -0.57
SIM1-202ENST00000369208 RNF8O76064 485 aa11.46□□□□□ -0.57
SIM1-202ENST00000369208 CEP85LQ5SZL2 805 aa11.46□□□□□ -0.57
SIM1-202ENST00000369208 MMS22LQ6ZRQ5 1243 aa11.46□□□□□ -0.57
SIM1-202ENST00000369208 USP37Q86T82 979 aa11.46□□□□□ -0.57
SIM1-202ENST00000369208 LRRC27Q9C0I9 530 aa11.46□□□□□ -0.57
SIM1-202ENST00000369208 SLC12A5Q9H2X9 1139 aa11.46□□□□□ -0.57
SIM1-202ENST00000369208 HOMER2Q9NSB8 354 aa11.46□□□□□ -0.57
SIM1-202ENST00000369208 GLRX3O76003 335 aaKnown RBP11.46□□□□□ -0.57
SIM1-202ENST00000369208 STX1AQ16623 288 aa11.46□□□□□ -0.57
SIM1-202ENST00000369208 PHLDB2Q86SQ0 1253 aa11.46□□□□□ -0.57
SIM1-202ENST00000369208 CATIPQ7Z7H3 387 aa11.46□□□□□ -0.58
SIM1-202ENST00000369208 MRFAP1L1Q96HT8 127 aa11.46□□□□□ -0.58
SIM1-202ENST00000369208 CLEC11AQ9Y240 323 aa11.46□□□□□ -0.58
SIM1-202ENST00000369208 ABCC11Q96J66 1382 aa11.46□□□□□ -0.58
SIM1-202ENST00000369208 FKBP15Q5T1M5 1219 aa11.46□□□□□ -0.58
SIM1-202ENST00000369208 LARP1BQ659C4 914 aaKnown RBP11.46□□□□□ -0.58
SIM1-202ENST00000369208 BIRC2Q13490 618 aa11.45□□□□□ -0.58
SIM1-202ENST00000369208 IFNL2Q8IZJ0 200 aa11.45□□□□□ -0.58
SIM1-202ENST00000369208 PLB1Q6P1J6 1458 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms