RNA–Protein interactions for RNA: ENST00000369017.5

NSMCE4A-201, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,224 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-201ENST00000369017 MTX1Q13505 466 aa31.35■■■□□ 2.61
NSMCE4A-201ENST00000369017 CCDC57Q2TAC2 916 aa31.35■■■□□ 2.61
NSMCE4A-201ENST00000369017 CCDC24Q8N4L8 307 aa31.35■■■□□ 2.61
NSMCE4A-201ENST00000369017 KAZALD1Q96I82 304 aa31.35■■■□□ 2.61
NSMCE4A-201ENST00000369017 RTL9Q8NET4 1388 aa31.34■■■□□ 2.61
NSMCE4A-201ENST00000369017 DDX46Q7L014 1031 aaKnown RBP31.34■■■□□ 2.61
NSMCE4A-201ENST00000369017 RBM17Q96I25 401 aaKnown RBP31.34■■■□□ 2.61
NSMCE4A-201ENST00000369017 ATP8B2P98198 1209 aa31.33■■■□□ 2.61
NSMCE4A-201ENST00000369017 IFIT5Q13325 482 aaKnown RBP31.33■■■□□ 2.61
NSMCE4A-201ENST00000369017 CRY2Q49AN0 593 aa31.33■■■□□ 2.61
NSMCE4A-201ENST00000369017 C1orf115Q9H7X2 142 aa31.33■■■□□ 2.61
NSMCE4A-201ENST00000369017 ANKRD18BA2A2Z9 1011 aa31.32■■■□□ 2.6
NSMCE4A-201ENST00000369017 NPR1P16066 1061 aa31.32■■■□□ 2.6
NSMCE4A-201ENST00000369017 CDC5LQ99459 802 aaKnown RBP31.32■■■□□ 2.6
NSMCE4A-201ENST00000369017 KIF13BQ9NQT8 1826 aa31.32■■■□□ 2.6
NSMCE4A-201ENST00000369017 SRGAP3O43295 1099 aa31.31■■■□□ 2.6
NSMCE4A-201ENST00000369017 ALDH1B1P30837 517 aa31.31■■■□□ 2.6
NSMCE4A-201ENST00000369017 EPHA10Q5JZY3 1008 aa31.31■■■□□ 2.6
NSMCE4A-201ENST00000369017 C2CD5Q86YS7 1000 aa31.31■■■□□ 2.6
NSMCE4A-201ENST00000369017 ANKRD44Q8N8A2 993 aa31.31■■■□□ 2.6
NSMCE4A-201ENST00000369017 MASTLQ96GX5 879 aa31.31■■■□□ 2.6
NSMCE4A-201ENST00000369017 TAF7LQ5H9L4 462 aa31.3■■■□□ 2.6
NSMCE4A-201ENST00000369017 CEP85Q6P2H3 762 aa31.3■■■□□ 2.6
NSMCE4A-201ENST00000369017 ANKRD31Q8N7Z5 1873 aa31.29■■■□□ 2.6
NSMCE4A-201ENST00000369017 SRGNP10124 158 aa31.29■■■□□ 2.6
NSMCE4A-201ENST00000369017 ITGA6P23229 1130 aa31.28■■■□□ 2.6
NSMCE4A-201ENST00000369017 HOXA10P31260 410 aaPredicted RBP31.28■■■□□ 2.6
NSMCE4A-201ENST00000369017 STYK1Q6J9G0 422 aa31.28■■■□□ 2.6
NSMCE4A-201ENST00000369017 GREM2Q9H772 168 aa31.28■■■□□ 2.6
NSMCE4A-201ENST00000369017 KLHL34Q8N239 644 aa31.27■■■□□ 2.6
NSMCE4A-201ENST00000369017 CNKSR1Q969H4 720 aa31.27■■■□□ 2.6
NSMCE4A-201ENST00000369017 CRAMP1Q96RY5 1269 aa31.27■■■□□ 2.6
NSMCE4A-201ENST00000369017 TNRC6CQ9HCJ0 1690 aaKnown RBP31.27■■■□□ 2.6
NSMCE4A-201ENST00000369017 FAM161AQ3B820 660 aa31.26■■■□□ 2.59
NSMCE4A-201ENST00000369017 TMC4Q7Z404 712 aa31.26■■■□□ 2.59
NSMCE4A-201ENST00000369017 IGHMBP2P38935 993 aaKnown RBP31.25■■■□□ 2.59
NSMCE4A-201ENST00000369017 ANKRD18AQ8IVF6 992 aa31.25■■■□□ 2.59
NSMCE4A-201ENST00000369017 SSH3Q8TE77 659 aa31.25■■■□□ 2.59
NSMCE4A-201ENST00000369017 CCDC85AQ96PX6 553 aaPredicted RBP31.25■■■□□ 2.59
NSMCE4A-201ENST00000369017 RWDD1Q9H446 243 aaPredicted RBP31.25■■■□□ 2.59
NSMCE4A-201ENST00000369017 FBXO3Q9UK99 471 aa31.25■■■□□ 2.59
NSMCE4A-201ENST00000369017 BBOX1O75936 387 aa31.24■■■□□ 2.59
NSMCE4A-201ENST00000369017 C3orf67Q6ZVT6 689 aa31.24■■■□□ 2.59
NSMCE4A-201ENST00000369017 TMX4Q9H1E5 349 aaPredicted RBP31.24■■■□□ 2.59
NSMCE4A-201ENST00000369017 GRAPQ13588 217 aa31.23■■■□□ 2.59
NSMCE4A-201ENST00000369017 GRAPLQ8TC17 118 aaPredicted RBP31.23■■■□□ 2.59
NSMCE4A-201ENST00000369017 ZNF622Q969S3 477 aaKnown RBP eCLIP31.23■■■□□ 2.592e-8■■■□□ 15.2
NSMCE4A-201ENST00000369017 MPHOSPH8Q99549 860 aa31.23■■■□□ 2.59
NSMCE4A-201ENST00000369017 LRP5O75197 1615 aa31.23■■■□□ 2.59
NSMCE4A-201ENST00000369017 POLA2Q14181 598 aa31.22■■■□□ 2.59
NSMCE4A-201ENST00000369017 HSP90AB4PQ58FF6 505 aa31.22■■■□□ 2.59
NSMCE4A-201ENST00000369017 PCDHB15Q9Y5E8 787 aa31.22■■■□□ 2.59
NSMCE4A-201ENST00000369017 PNMA6EA0A0J9YXQ4 647 aa31.21■■■□□ 2.59
NSMCE4A-201ENST00000369017 RPS8P62241 208 aaKnown RBP31.21■■■□□ 2.59
NSMCE4A-201ENST00000369017 HDAC1Q13547 482 aaPredicted RBP31.2■■■□□ 2.59
NSMCE4A-201ENST00000369017 COPRSQ9NQ92 184 aa31.2■■■□□ 2.59
NSMCE4A-201ENST00000369017 PIM2Q9P1W9 311 aa31.2■■■□□ 2.59
NSMCE4A-201ENST00000369017 DLEC1Q9Y238 1755 aa31.18■■■□□ 2.58
NSMCE4A-201ENST00000369017 DPEP1P16444 411 aa31.18■■■□□ 2.58
NSMCE4A-201ENST00000369017 CHRNA5P30532 468 aa31.18■■■□□ 2.58
NSMCE4A-201ENST00000369017 LDHAL6AQ6ZMR3 332 aa31.18■■■□□ 2.58
NSMCE4A-201ENST00000369017 TTLL6Q8N841 843 aa31.18■■■□□ 2.58
NSMCE4A-201ENST00000369017 FHDC1Q9C0D6 1143 aaPredicted RBP31.18■■■□□ 2.58
NSMCE4A-201ENST00000369017 SEC31BQ9NQW1 1179 aa31.18■■■□□ 2.58
NSMCE4A-201ENST00000369017 A0A0G2JLW4 131 aa31.17■■■□□ 2.58
NSMCE4A-201ENST00000369017 G3BP1Q13283 466 aaKnown RBP eCLIP31.17■■■□□ 2.58
NSMCE4A-201ENST00000369017 BSDC1Q9NW68 430 aaPredicted RBP31.17■■■□□ 2.58
NSMCE4A-201ENST00000369017 COL11A2P13942 1736 aaPredicted RBP31.16■■■□□ 2.58
NSMCE4A-201ENST00000369017 RFX5P48382 616 aaPredicted RBP31.16■■■□□ 2.58
NSMCE4A-201ENST00000369017 PTPN12Q05209 780 aaKnown RBP31.16■■■□□ 2.58
NSMCE4A-201ENST00000369017 SIRT2Q8IXJ6 389 aa31.16■■■□□ 2.58
NSMCE4A-201ENST00000369017 CNNM1Q9NRU3 951 aa31.16■■■□□ 2.58
NSMCE4A-201ENST00000369017 SURF6O75683 361 aaKnown RBP31.15■■■□□ 2.58
NSMCE4A-201ENST00000369017 CIAO1O76071 339 aa31.15■■■□□ 2.58
NSMCE4A-201ENST00000369017 ERC1Q8IUD2 1116 aa31.15■■■□□ 2.58
NSMCE4A-201ENST00000369017 PPP4R2Q9NY27 417 aa31.15■■■□□ 2.58
NSMCE4A-201ENST00000369017 OS9Q13438 667 aaPredicted RBP31.14■■■□□ 2.58
NSMCE4A-201ENST00000369017 GRIPAP1Q4V328 841 aa31.14■■■□□ 2.58
NSMCE4A-201ENST00000369017 CELF1Q92879 486 aaKnown RBP31.14■■■□□ 2.58
NSMCE4A-201ENST00000369017 GCC1Q96CN9 775 aa31.14■■■□□ 2.58
NSMCE4A-201ENST00000369017 NOP58Q9Y2X3 529 aaKnown RBP31.14■■■□□ 2.58
NSMCE4A-201ENST00000369017 EYA2O00167 538 aa31.13■■■□□ 2.57
NSMCE4A-201ENST00000369017 PPEF1O14829 653 aaPredicted RBP31.13■■■□□ 2.57
NSMCE4A-201ENST00000369017 IL15P40933 162 aaPredicted RBP31.13■■■□□ 2.57
NSMCE4A-201ENST00000369017 CCDC136Q96JN2 1154 aa31.13■■■□□ 2.57
NSMCE4A-201ENST00000369017 RAB11FIP3O75154 756 aa31.12■■■□□ 2.57
NSMCE4A-201ENST00000369017 SOGA3Q5TF21 947 aa31.12■■■□□ 2.57
NSMCE4A-201ENST00000369017 CC2D2BQ6DHV5 1058 aa31.12■■■□□ 2.57
NSMCE4A-201ENST00000369017 SYT17Q9BSW7 474 aa31.12■■■□□ 2.57
NSMCE4A-201ENST00000369017 MROH5Q6ZUA9 1318 aa31.12■■■□□ 2.57
NSMCE4A-201ENST00000369017 KCNA3P22001 575 aa31.11■■■□□ 2.57
NSMCE4A-201ENST00000369017 DALRD3Q5D0E6 543 aaKnown RBP31.11■■■□□ 2.57
NSMCE4A-201ENST00000369017 PRPF40BQ6NWY9 871 aaKnown RBP31.11■■■□□ 2.57
NSMCE4A-201ENST00000369017 SP8Q8IXZ3 490 aa31.11■■■□□ 2.57
NSMCE4A-201ENST00000369017 ZNF594Q96JF6 807 aaPredicted RBP31.11■■■□□ 2.57
NSMCE4A-201ENST00000369017 ZBTB47Q9UFB7 747 aaPredicted RBP31.11■■■□□ 2.57
NSMCE4A-201ENST00000369017 ANKRD2Q9GZV1 360 aa31.1■■■□□ 2.57
NSMCE4A-201ENST00000369017 DCTPP1Q9H773 170 aa31.1■■■□□ 2.57
NSMCE4A-201ENST00000369017 KIAA1551Q9HCM1 1747 aa31.1■■■□□ 2.57
NSMCE4A-201ENST00000369017 KLHDC4Q8TBB5 520 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms