RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 TUBB4AP04350 444 aa12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 CDK11BP21127 795 aaKnown RBP12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 KCNJ4P48050 445 aa12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 PTH1RQ03431 593 aa12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 BMS1Q14692 1282 aaKnown RBP12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 PRPF40BQ6NWY9 871 aaKnown RBP12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 SNRKQ9NRH2 765 aa12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 MIS18AQ9NYP9 233 aa12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 TPCN1Q9ULQ1 816 aa12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 GOLGA6L19H0YKK7 550 aa12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 H2AFXP16104 143 aaPredicted RBP12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 CCZ1BP86790 482 aa12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 CCZ1P86791 482 aaPredicted RBP12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 MTHFSDQ2M296 383 aaKnown RBP12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 CCAR2Q8N163 923 aaKnown RBP12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 DNAJC2Q99543 621 aaKnown RBP12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 L2HGDHQ9H9P8 463 aa12.38□□□□□ -0.43
LYSMD1-201ENST00000368908 GSDMDP57764 484 aa12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 ELF2Q15723 593 aa12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 STX1AQ16623 288 aa12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 MAP3K19Q56UN5 1328 aa12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 USP27XA6NNY8 438 aa12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 HIP1O00291 1037 aa12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 SKILP12757 684 aa12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 KCNJ6P48051 423 aa12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 DHX8Q14562 1220 aaKnown RBP12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 NECAB1Q8N987 351 aa12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 IPO4Q8TEX9 1081 aaKnown RBP12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
LYSMD1-201ENST00000368908 NR1I2O75469 434 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 CYP2C19P33261 490 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 ESCO1Q5FWF5 840 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 CREB3L3Q68CJ9 461 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 FERMT3Q86UX7 667 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 BICD2Q8TD16 824 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 PGBD1Q96JS3 809 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 CHMP3Q9Y3E7 222 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 PLEKHG3A1L390 1219 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 CCDC69A6NI79 296 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 GPATCH3Q96I76 525 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 ORAI2Q96SN7 254 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 RBM8AQ9Y5S9 174 aaKnown RBP12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 JCADQ9P266 1359 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 PXDNQ92626 1479 aa12.36□□□□□ -0.43
LYSMD1-201ENST00000368908 MAP4K1Q92918 833 aa12.35□□□□□ -0.43
LYSMD1-201ENST00000368908 EVI5LQ96CN4 794 aa12.35□□□□□ -0.43
LYSMD1-201ENST00000368908 NOL10Q9BSC4 688 aaKnown RBP12.35□□□□□ -0.43
LYSMD1-201ENST00000368908 ZNF446Q9NWS9 450 aa12.35□□□□□ -0.43
LYSMD1-201ENST00000368908 IMPACTQ9P2X3 320 aa12.35□□□□□ -0.43
LYSMD1-201ENST00000368908 ADCY9O60503 1353 aa12.35□□□□□ -0.43
LYSMD1-201ENST00000368908 FOXO3O43524 673 aa12.35□□□□□ -0.43
LYSMD1-201ENST00000368908 RESTQ13127 1097 aa12.35□□□□□ -0.43
LYSMD1-201ENST00000368908 HSP90AB2PQ58FF8 381 aa12.35□□□□□ -0.43
LYSMD1-201ENST00000368908 OSBPL5Q9H0X9 879 aaPredicted RBP12.35□□□□□ -0.43
LYSMD1-201ENST00000368908 TRPM3Q9HCF6 1732 aaPredicted RBP12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 USP6P35125 1406 aa12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 SBNO1A3KN83 1393 aa12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 SOS2Q07890 1332 aaPredicted RBP12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 IGSF1Q8N6C5 1336 aa12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 SRGAP3O43295 1099 aa12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 FAM173BQ6P4H8 233 aa12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 ZSCAN16Q9H4T2 348 aaPredicted RBP12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 ECHDC1Q9NTX5 307 aa12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 FLT4P35916 1363 aa12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 PSDA5PKW4 1024 aaPredicted RBP12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 SLC27A2O14975 620 aa12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 RPS6KB1P23443 525 aa12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 MTX1Q13505 466 aa12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 LARP1Q6PKG0 1096 aaKnown RBP12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 BLOC1S2Q6QNY1 142 aa12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 NAP1L2Q9ULW6 460 aaPredicted RBP12.34□□□□□ -0.43
LYSMD1-201ENST00000368908 TSGA10IPQ3SY00 556 aa12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 CCDC93Q567U6 631 aa12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 C11orf57Q6ZUT1 292 aaPredicted RBP12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 HMG20BQ9P0W2 317 aa12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 TFIP11Q9UBB9 837 aaKnown RBP12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 CFAP45Q9UL16 551 aa12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 FHOD1Q9Y613 1164 aa12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 ADRA2BP18089 450 aa12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 ILDR1Q86SU0 546 aaPredicted RBP12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 ERC1Q8IUD2 1116 aa12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 CLASRPQ8N2M8 674 aaKnown RBP12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 CCDC150Q8NCX0 1101 aa12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 ANO10Q9NW15 660 aa12.33□□□□□ -0.44
LYSMD1-201ENST00000368908 COL22A1Q8NFW1 1626 aaPredicted RBP12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 MED1Q15648 1581 aaPredicted RBP12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 HSPA1LP34931 641 aa12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 SNW1Q13573 536 aaKnown RBP12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 TOB2Q14106 344 aaPredicted RBP12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 ARID5BQ14865 1188 aa12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 FILIP1Q7Z7B0 1213 aa12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 V9GYY5 206 aaPredicted RBP12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 KDM3BQ7LBC6 1761 aa12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 ZBTB22O15209 634 aa12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 ATP8B1O43520 1251 aa12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 PSME1Q06323 249 aa12.32□□□□□ -0.44
LYSMD1-201ENST00000368908 DHX40Q8IX18 779 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms