RNA–Protein interactions for RNA: ENST00000368892.8

VPS72-202, Transcript of vacuolar protein sorting 72 homolog, humanhuman

APPRIS P1 TSL 1 (best)

Gene VPS72, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-202ENST00000368892 POLA2Q14181 598 aa25.67■■□□□ 1.7
VPS72-202ENST00000368892 SSH3Q8TE77 659 aa25.67■■□□□ 1.7
VPS72-202ENST00000368892 C10orf71Q711Q0 1435 aa25.67■■□□□ 1.7
VPS72-202ENST00000368892 PNMA6EA0A0J9YXQ4 647 aa25.66■■□□□ 1.7
VPS72-202ENST00000368892 SPON1Q9HCB6 807 aa25.66■■□□□ 1.7
VPS72-202ENST00000368892 TNRC6CQ9HCJ0 1690 aaKnown RBP25.65■■□□□ 1.7
VPS72-202ENST00000368892 HDAC1Q13547 482 aaPredicted RBP25.64■■□□□ 1.7
VPS72-202ENST00000368892 SRGAP3O43295 1099 aa25.63■■□□□ 1.69
VPS72-202ENST00000368892 RFX5P48382 616 aaPredicted RBP25.63■■□□□ 1.69
VPS72-202ENST00000368892 CCDC152Q4G0S7 254 aa25.63■■□□□ 1.69
VPS72-202ENST00000368892 GREM2Q9H772 168 aa25.63■■□□□ 1.69
VPS72-202ENST00000368892 PDE6BP35913 854 aa25.63■■□□□ 1.69
VPS72-202ENST00000368892 ANKRD31Q8N7Z5 1873 aa25.62■■□□□ 1.69
VPS72-202ENST00000368892 FAM161AQ3B820 660 aa25.62■■□□□ 1.69
VPS72-202ENST00000368892 MYH3P11055 1940 aa25.62■■□□□ 1.69
VPS72-202ENST00000368892 HOXA10P31260 410 aaPredicted RBP25.61■■□□□ 1.69
VPS72-202ENST00000368892 PDZRN3Q9UPQ7 1066 aa25.61■■□□□ 1.69
VPS72-202ENST00000368892 HMMRO75330 724 aa25.6■■□□□ 1.69
VPS72-202ENST00000368892 PPP4R2Q9NY27 417 aa25.6■■□□□ 1.69
VPS72-202ENST00000368892 SRGNP10124 158 aa25.59■■□□□ 1.69
VPS72-202ENST00000368892 ITGA6P23229 1130 aa25.59■■□□□ 1.69
VPS72-202ENST00000368892 PTPN12Q05209 780 aaKnown RBP25.59■■□□□ 1.69
VPS72-202ENST00000368892 KIF13BQ9NQT8 1826 aa25.59■■□□□ 1.69
VPS72-202ENST00000368892 IFIT5Q13325 482 aaKnown RBP25.58■■□□□ 1.69
VPS72-202ENST00000368892 CCDC57Q2TAC2 916 aa25.58■■□□□ 1.69
VPS72-202ENST00000368892 CCDC85AQ96PX6 553 aaPredicted RBP25.58■■□□□ 1.69
VPS72-202ENST00000368892 COPRSQ9NQ92 184 aa25.58■■□□□ 1.69
VPS72-202ENST00000368892 NOP58Q9Y2X3 529 aaKnown RBP25.58■■□□□ 1.68
VPS72-202ENST00000368892 ANKRD18BA2A2Z9 1011 aa25.57■■□□□ 1.68
VPS72-202ENST00000368892 IGHDP01880 384 aa25.57■■□□□ 1.68
VPS72-202ENST00000368892 RWDD1Q9H446 243 aaPredicted RBP25.57■■□□□ 1.68
VPS72-202ENST00000368892 SEC31BQ9NQW1 1179 aa25.57■■□□□ 1.68
VPS72-202ENST00000368892 CHMP3Q9Y3E7 222 aa25.57■■□□□ 1.68
VPS72-202ENST00000368892 CD2APQ9Y5K6 639 aa25.57■■□□□ 1.68
VPS72-202ENST00000368892 GTF3C3Q9Y5Q9 886 aa25.57■■□□□ 1.68
VPS72-202ENST00000368892 NPR1P16066 1061 aa25.55■■□□□ 1.68
VPS72-202ENST00000368892 TGFB2P61812 414 aa25.55■■□□□ 1.68
VPS72-202ENST00000368892 CRAMP1Q96RY5 1269 aa25.55■■□□□ 1.68
VPS72-202ENST00000368892 DCTPP1Q9H773 170 aa25.55■■□□□ 1.68
VPS72-202ENST00000368892 FBXO3Q9UK99 471 aa25.55■■□□□ 1.68
VPS72-202ENST00000368892 DDX46Q7L014 1031 aaKnown RBP25.54■■□□□ 1.68
VPS72-202ENST00000368892 H0YIN7 160 aa25.53■■□□□ 1.68
VPS72-202ENST00000368892 C2CD5Q86YS7 1000 aa25.53■■□□□ 1.68
VPS72-202ENST00000368892 KLHDC4Q8TBB5 520 aa25.53■■□□□ 1.68
VPS72-202ENST00000368892 RPGRQ92834 1020 aaKnown RBP25.53■■□□□ 1.68
VPS72-202ENST00000368892 MASTLQ96GX5 879 aa25.53■■□□□ 1.68
VPS72-202ENST00000368892 RBM17Q96I25 401 aaKnown RBP25.53■■□□□ 1.68
VPS72-202ENST00000368892 CDC5LQ99459 802 aaKnown RBP25.53■■□□□ 1.68
VPS72-202ENST00000368892 LRP5O75197 1615 aa25.53■■□□□ 1.68
VPS72-202ENST00000368892 COL4A1P02462 1669 aa25.53■■□□□ 1.68
VPS72-202ENST00000368892 GRAPQ13588 217 aa25.53■■□□□ 1.68
VPS72-202ENST00000368892 STYK1Q6J9G0 422 aa25.53■■□□□ 1.68
VPS72-202ENST00000368892 GRAPLQ8TC17 118 aaPredicted RBP25.53■■□□□ 1.68
VPS72-202ENST00000368892 CELF1Q92879 486 aaKnown RBP25.53■■□□□ 1.68
VPS72-202ENST00000368892 PA2G4Q9UQ80 394 aaKnown RBP25.53■■□□□ 1.68
VPS72-202ENST00000368892 COL11A2P13942 1736 aaPredicted RBP25.52■■□□□ 1.68
VPS72-202ENST00000368892 KDM2BQ8NHM5 1336 aa25.52■■□□□ 1.68
VPS72-202ENST00000368892 KCNA3P22001 575 aa25.52■■□□□ 1.68
VPS72-202ENST00000368892 RPS8P62241 208 aaKnown RBP25.52■■□□□ 1.68
VPS72-202ENST00000368892 SMC5Q8IY18 1101 aa25.52■■□□□ 1.68
VPS72-202ENST00000368892 ZNF594Q96JF6 807 aaPredicted RBP25.52■■□□□ 1.68
VPS72-202ENST00000368892 CCDC136Q96JN2 1154 aa25.52■■□□□ 1.68
VPS72-202ENST00000368892 CIAO1O76071 339 aa25.51■■□□□ 1.67
VPS72-202ENST00000368892 CHRNA5P30532 468 aa25.5■■□□□ 1.67
VPS72-202ENST00000368892 ATG9AQ7Z3C6 839 aa25.5■■□□□ 1.67
VPS72-202ENST00000368892 BSDC1Q9NW68 430 aaPredicted RBP25.5■■□□□ 1.67
VPS72-202ENST00000368892 KIAA1551Q9HCM1 1747 aa25.5■■□□□ 1.67
VPS72-202ENST00000368892 EYA2O00167 538 aa25.49■■□□□ 1.67
VPS72-202ENST00000368892 SURF6O75683 361 aaKnown RBP25.49■■□□□ 1.67
VPS72-202ENST00000368892 BBOX1O75936 387 aa25.49■■□□□ 1.67
VPS72-202ENST00000368892 ALDH1B1P30837 517 aa25.49■■□□□ 1.67
VPS72-202ENST00000368892 ANKRD18AQ8IVF6 992 aa25.49■■□□□ 1.67
VPS72-202ENST00000368892 GCC1Q96CN9 775 aa25.49■■□□□ 1.67
VPS72-202ENST00000368892 RIPOR2Q9Y4F9 1068 aa25.49■■□□□ 1.67
VPS72-202ENST00000368892 B4GALNT3Q6L9W6 998 aa25.48■■□□□ 1.67
VPS72-202ENST00000368892 LDHAL6AQ6ZMR3 332 aa25.48■■□□□ 1.67
VPS72-202ENST00000368892 PUS3Q9BZE2 481 aaKnown RBP25.48■■□□□ 1.67
VPS72-202ENST00000368892 DPEP1P16444 411 aa25.47■■□□□ 1.67
VPS72-202ENST00000368892 IGHMBP2P38935 993 aaKnown RBP25.47■■□□□ 1.67
VPS72-202ENST00000368892 HSP90AB4PQ58FF6 505 aa25.47■■□□□ 1.67
VPS72-202ENST00000368892 TAF7LQ5H9L4 462 aa25.47■■□□□ 1.67
VPS72-202ENST00000368892 EXOC6BQ9Y2D4 811 aa25.47■■□□□ 1.67
VPS72-202ENST00000368892 LRRC24Q50LG9 513 aa25.47■■□□□ 1.67
VPS72-202ENST00000368892 A0A0G2JLW4 131 aa25.46■■□□□ 1.67
VPS72-202ENST00000368892 RAB11FIP3O75154 756 aa25.46■■□□□ 1.67
VPS72-202ENST00000368892 IL15P40933 162 aaPredicted RBP25.46■■□□□ 1.67
VPS72-202ENST00000368892 TMC4Q7Z404 712 aa25.46■■□□□ 1.67
VPS72-202ENST00000368892 CNKSR1Q969H4 720 aa25.46■■□□□ 1.67
VPS72-202ENST00000368892 MPHOSPH8Q99549 860 aa25.46■■□□□ 1.67
VPS72-202ENST00000368892 SIL1Q9H173 461 aa25.46■■□□□ 1.67
VPS72-202ENST00000368892 DLEC1Q9Y238 1755 aa25.46■■□□□ 1.67
VPS72-202ENST00000368892 G3BP1Q13283 466 aaKnown RBP eCLIP25.45■■□□□ 1.66
VPS72-202ENST00000368892 CENPQQ7L2Z9 268 aaPredicted RBP25.45■■□□□ 1.66
VPS72-202ENST00000368892 SRCAPQ6ZRS2 3230 aa25.44■■□□□ 1.66
VPS72-202ENST00000368892 SASH1O94885 1247 aa25.44■■□□□ 1.66
VPS72-202ENST00000368892 TAF1P21675 1872 aa25.44■■□□□ 1.66
VPS72-202ENST00000368892 ZNF622Q969S3 477 aaKnown RBP eCLIP25.44■■□□□ 1.662e-12■□□□□ 10.5
VPS72-202ENST00000368892 ERC1Q8IUD2 1116 aa25.43■■□□□ 1.66
VPS72-202ENST00000368892 FHDC1Q9C0D6 1143 aaPredicted RBP25.43■■□□□ 1.66
VPS72-202ENST00000368892 VGLL2Q8N8G2 317 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms