RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 CCDC158Q5M9N0 1113 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 TTC39AQ5SRH9 613 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 FKBP15Q5T1M5 1219 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 CEP85Q6P2H3 762 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 NUP133Q8WUM0 1156 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 VPS18Q9P253 973 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 TMEM2Q9UHN6 1383 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 ERCC6LQ2NKX8 1250 aa12.52□□□□□ -0.4
EBF3-202ENST00000368648 TRMT112Q9UI30 125 aaKnown RBP12.52□□□□□ -0.4
EBF3-202ENST00000368648 KIF2AO00139 706 aaPredicted RBP12.52□□□□□ -0.41
EBF3-202ENST00000368648 RNF187Q5TA31 235 aaPredicted RBP12.52□□□□□ -0.41
EBF3-202ENST00000368648 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.41
EBF3-202ENST00000368648 SH2B1Q9NRF2 756 aaPredicted RBP12.52□□□□□ -0.41
EBF3-202ENST00000368648 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
EBF3-202ENST00000368648 CTDP1Q9Y5B0 961 aaPredicted RBP12.52□□□□□ -0.41
EBF3-202ENST00000368648 CDC42BPAQ5VT25 1732 aa12.52□□□□□ -0.41
EBF3-202ENST00000368648 MARCKSP29966 332 aaPredicted RBP12.52□□□□□ -0.41
EBF3-202ENST00000368648 STX1AQ16623 288 aa12.52□□□□□ -0.41
EBF3-202ENST00000368648 IFNKQ9P0W0 207 aa12.52□□□□□ -0.41
EBF3-202ENST00000368648 CDR1P51861 262 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 SLAIN2Q9P270 581 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 A0A087WZG4 1122 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 TERF1P54274 439 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 SMARCE1Q969G3 411 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 EYA1Q99502 592 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 WWC3Q9ULE0 1092 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 SPATA31E1Q6ZUB1 1445 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 RHOXF2BP0C7M4 288 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 RHOXF2Q9BQY4 288 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 CHMLP26374 656 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
EBF3-202ENST00000368648 ODF2Q5BJF6 829 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 ERC1Q8IUD2 1116 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
EBF3-202ENST00000368648 CBX8Q9HC52 389 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 LZTFL1Q9NQ48 299 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 ABCF2Q9UG63 623 aa12.51□□□□□ -0.41
EBF3-202ENST00000368648 PA2G4Q9UQ80 394 aaKnown RBP12.51□□□□□ -0.41
EBF3-202ENST00000368648 ERICH2A1L162 156 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 PI4KAP2A4QPH2 592 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 ZSCAN12O43309 604 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 MICALL1Q8N3F8 863 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 PI4KAP1Q8N8J0 262 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 UTP14AQ9BVJ6 771 aaKnown RBP12.5□□□□□ -0.41
EBF3-202ENST00000368648 ZNF652Q9Y2D9 606 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 UBASH3AP57075 661 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 TICAM2Q86XR7 235 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 DNAAF4Q8WXU2 420 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 C8orf76Q96K31 380 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 RBM8AQ9Y5S9 174 aaKnown RBP12.5□□□□□ -0.41
EBF3-202ENST00000368648 ABCC11Q96J66 1382 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 CBFA2T2O43439 604 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 G2E3Q7L622 706 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 RHPN1Q8TCX5 695 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 CARD6Q9BX69 1037 aa12.5□□□□□ -0.41
EBF3-202ENST00000368648 DCAF8L1A6NGE4 600 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 HIP1O00291 1037 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 RBM5P52756 815 aaKnown RBP eCLIP12.49□□□□□ -0.41
EBF3-202ENST00000368648 MTHFSDQ2M296 383 aaKnown RBP12.49□□□□□ -0.41
EBF3-202ENST00000368648 NFATC2IPQ8NCF5 419 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 SNRKQ9NRH2 765 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 ADGRL2O95490 1459 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 KIF5CO60282 957 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 IGHMBP2P38935 993 aaKnown RBP12.49□□□□□ -0.41
EBF3-202ENST00000368648 PTPN21Q16825 1174 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 METTL24Q5JXM2 366 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 CCDC181Q5TID7 509 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 JMYQ8N9B5 988 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 DRC1Q96MC2 740 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 GNL3LQ9NVN8 582 aaKnown RBP12.49□□□□□ -0.41
EBF3-202ENST00000368648 TAX1BP1Q86VP1 789 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 CCDC171Q6TFL3 1326 aa12.49□□□□□ -0.41
EBF3-202ENST00000368648 IKQ13123 557 aaPredicted RBP12.48□□□□□ -0.41
EBF3-202ENST00000368648 DHX8Q14562 1220 aaKnown RBP12.48□□□□□ -0.41
EBF3-202ENST00000368648 UBE3BQ7Z3V4 1068 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 GIMAP7Q8NHV1 300 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 CEP89Q96ST8 783 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 ARHGEF5Q12774 1597 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 A0A1B0GVL5 298 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 IL2RBP14784 551 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 RASSF4Q9H2L5 321 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 IDH1O75874 414 aaKnown RBP12.48□□□□□ -0.41
EBF3-202ENST00000368648 GSDMDP57764 484 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 ATP2B2Q01814 1243 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 GDAP1L1Q96MZ0 367 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 FLT4P35916 1363 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 EVCP57679 992 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 DDX46Q7L014 1031 aaKnown RBP12.48□□□□□ -0.41
EBF3-202ENST00000368648 KIAA1328Q86T90 577 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
EBF3-202ENST00000368648 ANKRD65E5RJM6 399 aa12.47□□□□□ -0.41
EBF3-202ENST00000368648 BRD1O95696 1058 aa12.47□□□□□ -0.41
EBF3-202ENST00000368648 ECHDC1Q9NTX5 307 aa12.47□□□□□ -0.41
EBF3-202ENST00000368648 MAP3K2Q9Y2U5 619 aa12.47□□□□□ -0.41
EBF3-202ENST00000368648 GLI2P10070 1586 aa12.47□□□□□ -0.41
EBF3-202ENST00000368648 NEMFO60524 1076 aa12.47□□□□□ -0.41
EBF3-202ENST00000368648 CNNM3Q8NE01 707 aa12.47□□□□□ -0.41
EBF3-202ENST00000368648 CDC42BPBQ9Y5S2 1711 aa12.47□□□□□ -0.41
EBF3-202ENST00000368648 SNRPA1P09661 255 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms