RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 BMP2KQ9NSY1 1161 aaPredicted RBP14.32□□□□□ -0.12
PTPRK-203ENST00000368207 ZCCHC11Q5TAX3 1644 aaKnown RBP14.32□□□□□ -0.12
PTPRK-203ENST00000368207 PREX2Q70Z35 1606 aa14.32□□□□□ -0.12
PTPRK-203ENST00000368207 HOXB7P09629 217 aa14.32□□□□□ -0.12
PTPRK-203ENST00000368207 EIF4A1P60842 406 aaKnown RBP14.32□□□□□ -0.12
PTPRK-203ENST00000368207 VAT1LQ9HCJ6 419 aa14.32□□□□□ -0.12
PTPRK-203ENST00000368207 KDM2BQ8NHM5 1336 aa14.32□□□□□ -0.12
PTPRK-203ENST00000368207 BAG3O95817 575 aa14.32□□□□□ -0.12
PTPRK-203ENST00000368207 Q6ZUG5 572 aa14.32□□□□□ -0.12
PTPRK-203ENST00000368207 CAGE1Q8TC20 777 aa14.32□□□□□ -0.12
PTPRK-203ENST00000368207 METTL22Q9BUU2 404 aaPredicted RBP14.32□□□□□ -0.12
PTPRK-203ENST00000368207 STX8Q9UNK0 236 aa14.32□□□□□ -0.12
PTPRK-203ENST00000368207 SLC4A4Q9Y6R1 1079 aa14.32□□□□□ -0.12
PTPRK-203ENST00000368207 ZNHIT6Q9NWK9 470 aaKnown RBP14.31□□□□□ -0.12
PTPRK-203ENST00000368207 RIMBP3CA6NJZ7 1639 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 RIMBP3BA6NNM3 1639 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 RIMBP3Q9UFD9 1639 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 KDM5AP29375 1690 aaKnown RBP14.31□□□□□ -0.12
PTPRK-203ENST00000368207 BIN1O00499 593 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 CPA1P15085 419 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 TMEM132AQ24JP5 1023 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 USP25Q9UHP3 1055 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 ZGPATQ8N5A5 531 aaKnown RBP14.31□□□□□ -0.12
PTPRK-203ENST00000368207 PLXNC1O60486 1568 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 ZSCAN22P10073 491 aaPredicted RBP14.31□□□□□ -0.12
PTPRK-203ENST00000368207 ZFYVE27Q5T4F4 411 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 SLF2Q8IX21 1173 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 PLBD2Q8NHP8 589 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 SNX21Q969T3 373 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 ARGLU1Q9NWB6 273 aaPredicted RBP14.31□□□□□ -0.12
PTPRK-203ENST00000368207 KDM5CP41229 1560 aa14.31□□□□□ -0.12
PTPRK-203ENST00000368207 CCDC194A0A1B0GVG4 234 aa14.3□□□□□ -0.12
PTPRK-203ENST00000368207 PDE4BQ07343 736 aa14.3□□□□□ -0.12
PTPRK-203ENST00000368207 SMTNL1A8MU46 457 aa14.3□□□□□ -0.12
PTPRK-203ENST00000368207 DNAJC10Q8IXB1 793 aa14.3□□□□□ -0.12
PTPRK-203ENST00000368207 USP26Q9BXU7 913 aa14.3□□□□□ -0.12
PTPRK-203ENST00000368207 ANO10Q9NW15 660 aa14.3□□□□□ -0.12
PTPRK-203ENST00000368207 CBFA2T2O43439 604 aa14.3□□□□□ -0.12
PTPRK-203ENST00000368207 AK2P54819 239 aa14.3□□□□□ -0.12
PTPRK-203ENST00000368207 ZNF594Q96JF6 807 aaPredicted RBP14.3□□□□□ -0.12
PTPRK-203ENST00000368207 DBNDD2Q9BQY9 259 aa14.3□□□□□ -0.12
PTPRK-203ENST00000368207 PRDM15P57071 1507 aaPredicted RBP14.3□□□□□ -0.12
PTPRK-203ENST00000368207 KDM5DQ9BY66 1539 aa14.3□□□□□ -0.12
PTPRK-203ENST00000368207 F8W031 263 aaPredicted RBP14.3□□□□□ -0.12
PTPRK-203ENST00000368207 HCLS1P14317 486 aaPredicted RBP14.3□□□□□ -0.12
PTPRK-203ENST00000368207 NAA16Q6N069 864 aaPredicted RBP14.3□□□□□ -0.12
PTPRK-203ENST00000368207 SUCLG2Q96I99 432 aa14.3□□□□□ -0.12
PTPRK-203ENST00000368207 PRIM1P49642 420 aaKnown RBP14.29□□□□□ -0.12
PTPRK-203ENST00000368207 ST5P78524 1137 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 WTAPQ15007 396 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 CREB3L3Q68CJ9 461 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 SPTY2D1Q68D10 685 aaPredicted RBP14.29□□□□□ -0.12
PTPRK-203ENST00000368207 CRNKL1Q9BZJ0 848 aaKnown RBP14.29□□□□□ -0.12
PTPRK-203ENST00000368207 RTCBQ9Y3I0 505 aaKnown RBP14.29□□□□□ -0.12
PTPRK-203ENST00000368207 EFCAB6Q5THR3 1501 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 TPTE2Q6XPS3 522 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 MIGA1Q8NAN2 632 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 JAG2Q9Y219 1238 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 CNPY2Q9Y2B0 182 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 ARHGEF10O15013 1369 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 ROBO2Q9HCK4 1378 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 ZBTB43O43298 467 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 KLHL40Q2TBA0 621 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 INSRP06213 1382 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 CNNM3Q8NE01 707 aa14.29□□□□□ -0.12
PTPRK-203ENST00000368207 NSFL1CQ9UNZ2 370 aaKnown RBP14.29□□□□□ -0.12
PTPRK-203ENST00000368207 RNF113AO15541 343 aaKnown RBP14.28□□□□□ -0.12
PTPRK-203ENST00000368207 PLEKHF1Q96S99 279 aa14.28□□□□□ -0.12
PTPRK-203ENST00000368207 KAT14Q9H8E8 782 aa14.28□□□□□ -0.12
PTPRK-203ENST00000368207 DDX19AQ9NUU7 478 aaKnown RBP14.28□□□□□ -0.12
PTPRK-203ENST00000368207 TSPOAP1O95153 1857 aa14.28□□□□□ -0.12
PTPRK-203ENST00000368207 DEF6Q9H4E7 631 aa14.28□□□□□ -0.12
PTPRK-203ENST00000368207 PRR36Q9H6K5 1346 aa14.28□□□□□ -0.12
PTPRK-203ENST00000368207 A0A1B0GUL7 405 aa14.28□□□□□ -0.12
PTPRK-203ENST00000368207 EYA2O00167 538 aa14.28□□□□□ -0.12
PTPRK-203ENST00000368207 UBE2HP62256 183 aa14.28□□□□□ -0.12
PTPRK-203ENST00000368207 ISM2Q6H9L7 571 aa14.28□□□□□ -0.12
PTPRK-203ENST00000368207 ODF2Q5BJF6 829 aa14.27□□□□□ -0.12
PTPRK-203ENST00000368207 NDUFB9Q9Y6M9 179 aa14.27□□□□□ -0.12
PTPRK-203ENST00000368207 CFAP74Q9C0B2 1584 aa14.27□□□□□ -0.12
PTPRK-203ENST00000368207 CCP110O43303 1012 aa14.27□□□□□ -0.12
PTPRK-203ENST00000368207 PRC1O43663 620 aa14.27□□□□□ -0.12
PTPRK-203ENST00000368207 GIMAP6Q6P9H5 292 aa14.27□□□□□ -0.12
PTPRK-203ENST00000368207 ZSCAN30Q86W11 494 aa14.27□□□□□ -0.12
PTPRK-203ENST00000368207 PRM3Q9NNZ6 103 aa14.27□□□□□ -0.12
PTPRK-203ENST00000368207 GNPATO15228 680 aa14.27□□□□□ -0.13
PTPRK-203ENST00000368207 RBM10P98175 930 aaKnown RBP14.27□□□□□ -0.13
PTPRK-203ENST00000368207 GCKRQ14397 625 aa14.27□□□□□ -0.13
PTPRK-203ENST00000368207 CCDC129Q6ZRS4 1044 aa14.27□□□□□ -0.13
PTPRK-203ENST00000368207 WWC3Q9ULE0 1092 aa14.27□□□□□ -0.13
PTPRK-203ENST00000368207 MYOM2P54296 1465 aa14.26□□□□□ -0.13
PTPRK-203ENST00000368207 ESR2Q92731 530 aa14.26□□□□□ -0.13
PTPRK-203ENST00000368207 KIF5BP33176 963 aa14.26□□□□□ -0.13
PTPRK-203ENST00000368207 DNM1Q05193 864 aaKnown RBP14.26□□□□□ -0.13
PTPRK-203ENST00000368207 MAGEB6Q8N7X4 407 aa14.26□□□□□ -0.13
PTPRK-203ENST00000368207 ALG1Q9BT22 464 aa14.26□□□□□ -0.13
PTPRK-203ENST00000368207 GIGYF1O75420 1035 aaPredicted RBP14.26□□□□□ -0.13
PTPRK-203ENST00000368207 TNNI3KQ59H18 835 aa14.26□□□□□ -0.13
PTPRK-203ENST00000368207 CCDC112Q8NEF3 446 aa14.26□□□□□ -0.13
PTPRK-203ENST00000368207 FPGT-TNNI3KV9GXZ4 949 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms