RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 GLI3P10071 1580 aa16.82■□□□□ 0.28
SNHG28-201ENST00000368102 RFX5P48382 616 aaPredicted RBP16.81■□□□□ 0.28
SNHG28-201ENST00000368102 SYAP1Q96A49 352 aaPredicted RBP16.81■□□□□ 0.28
SNHG28-201ENST00000368102 COPRSQ9NQ92 184 aa16.81■□□□□ 0.28
SNHG28-201ENST00000368102 WDR33Q9C0J8 1336 aaKnown RBP16.81■□□□□ 0.28
SNHG28-201ENST00000368102 EVA1CP58658 441 aa16.81■□□□□ 0.28
SNHG28-201ENST00000368102 PTPN12Q05209 780 aaKnown RBP16.81■□□□□ 0.28
SNHG28-201ENST00000368102 RABL6Q3YEC7 729 aaPredicted RBP16.81■□□□□ 0.28
SNHG28-201ENST00000368102 LIMCH1Q9UPQ0 1083 aa16.81■□□□□ 0.28
SNHG28-201ENST00000368102 PARP4Q9UKK3 1724 aaKnown RBP16.81■□□□□ 0.28
SNHG28-201ENST00000368102 A1BGP04217 495 aa16.8■□□□□ 0.28
SNHG28-201ENST00000368102 NMIQ13287 307 aaPredicted RBP16.8■□□□□ 0.28
SNHG28-201ENST00000368102 A0A0D9SFI3 127 aa16.8■□□□□ 0.28
SNHG28-201ENST00000368102 STX6O43752 255 aa16.8■□□□□ 0.28
SNHG28-201ENST00000368102 CASP7P55210 303 aa16.8■□□□□ 0.28
SNHG28-201ENST00000368102 TTLL7Q6ZT98 887 aa16.8■□□□□ 0.28
SNHG28-201ENST00000368102 ZSCAN22P10073 491 aaPredicted RBP16.79■□□□□ 0.28
SNHG28-201ENST00000368102 GJB2P29033 226 aa16.79■□□□□ 0.28
SNHG28-201ENST00000368102 TSPY26PQ9H489 355 aa16.79■□□□□ 0.28
SNHG28-201ENST00000368102 SMC3Q9UQE7 1217 aa16.79■□□□□ 0.28
SNHG28-201ENST00000368102 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
SNHG28-201ENST00000368102 LTBP4Q8N2S1 1624 aa16.79■□□□□ 0.28
SNHG28-201ENST00000368102 PDRG1Q9NUG6 133 aa16.79■□□□□ 0.28
SNHG28-201ENST00000368102 COL15A1P39059 1388 aa16.79■□□□□ 0.28
SNHG28-201ENST00000368102 ME3Q16798 604 aa16.78■□□□□ 0.28
SNHG28-201ENST00000368102 FAM173BQ6P4H8 233 aa16.78■□□□□ 0.28
SNHG28-201ENST00000368102 RBM8AQ9Y5S9 174 aaKnown RBP16.78■□□□□ 0.28
SNHG28-201ENST00000368102 PHF14O94880 888 aa16.78■□□□□ 0.28
SNHG28-201ENST00000368102 DNM1Q05193 864 aaKnown RBP16.78■□□□□ 0.28
SNHG28-201ENST00000368102 TFCP2Q12800 502 aa16.78■□□□□ 0.28
SNHG28-201ENST00000368102 KIAA2012Q0VF49 1180 aa16.77■□□□□ 0.28
SNHG28-201ENST00000368102 LMBR1LQ6UX01 489 aa16.77■□□□□ 0.28
SNHG28-201ENST00000368102 ZNF589Q86UQ0 364 aaPredicted RBP16.77■□□□□ 0.28
SNHG28-201ENST00000368102 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.28
SNHG28-201ENST00000368102 VPS37CA5D8V6 355 aaPredicted RBP16.77■□□□□ 0.28
SNHG28-201ENST00000368102 H7C1W4 665 aa16.77■□□□□ 0.28
SNHG28-201ENST00000368102 HIP1O00291 1037 aa16.77■□□□□ 0.28
SNHG28-201ENST00000368102 F13A1P00488 732 aa16.77■□□□□ 0.28
SNHG28-201ENST00000368102 KCNJ4P48050 445 aa16.77■□□□□ 0.28
SNHG28-201ENST00000368102 SMAP1Q8IYB5 467 aaPredicted RBP16.77■□□□□ 0.28
SNHG28-201ENST00000368102 FSD1Q9BTV5 496 aa16.77■□□□□ 0.28
SNHG28-201ENST00000368102 TPCN1Q9ULQ1 816 aa16.77■□□□□ 0.28
SNHG28-201ENST00000368102 NECTIN1Q15223 517 aa16.76■□□□□ 0.27
SNHG28-201ENST00000368102 TNNI3KQ59H18 835 aa16.76■□□□□ 0.27
SNHG28-201ENST00000368102 CREB3L3Q68CJ9 461 aa16.76■□□□□ 0.27
SNHG28-201ENST00000368102 FERMT3Q86UX7 667 aa16.76■□□□□ 0.27
SNHG28-201ENST00000368102 ZNF830Q96NB3 372 aaPredicted RBP16.76■□□□□ 0.27
SNHG28-201ENST00000368102 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
SNHG28-201ENST00000368102 CHMP3Q9Y3E7 222 aa16.76■□□□□ 0.27
SNHG28-201ENST00000368102 FPGT-TNNI3KV9GXZ4 949 aa16.76■□□□□ 0.27
SNHG28-201ENST00000368102 ARFGEF2Q9Y6D5 1785 aa16.76■□□□□ 0.27
SNHG28-201ENST00000368102 KCPQ6ZWJ8 1503 aa16.76■□□□□ 0.27
SNHG28-201ENST00000368102 UVSSAQ2YD98 709 aa16.76■□□□□ 0.27
SNHG28-201ENST00000368102 ZBTB3Q9H5J0 574 aa16.76■□□□□ 0.27
SNHG28-201ENST00000368102 LAMB4A4D0S4 1761 aa16.76■□□□□ 0.27
SNHG28-201ENST00000368102 HCLS1P14317 486 aaPredicted RBP16.75■□□□□ 0.27
SNHG28-201ENST00000368102 FAM184AQ8NB25 1140 aa16.75■□□□□ 0.27
SNHG28-201ENST00000368102 CWC25Q9NXE8 425 aaPredicted RBP16.75■□□□□ 0.27
SNHG28-201ENST00000368102 PTMAP06454 111 aaKnown RBP16.75■□□□□ 0.27
SNHG28-201ENST00000368102 FOXO4P98177 505 aa16.75■□□□□ 0.27
SNHG28-201ENST00000368102 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
SNHG28-201ENST00000368102 MTMR6Q9Y217 621 aa16.75■□□□□ 0.27
SNHG28-201ENST00000368102 UBAP1LF5GYI3 381 aa16.74■□□□□ 0.27
SNHG28-201ENST00000368102 STK3Q13188 491 aa16.74■□□□□ 0.27
SNHG28-201ENST00000368102 SLFNL1Q499Z3 407 aa16.74■□□□□ 0.27
SNHG28-201ENST00000368102 GIMAP6Q6P9H5 292 aa16.74■□□□□ 0.27
SNHG28-201ENST00000368102 KCNB2Q92953 911 aa16.74■□□□□ 0.27
SNHG28-201ENST00000368102 ZSWIM6Q9HCJ5 1215 aa16.74■□□□□ 0.27
SNHG28-201ENST00000368102 USP25Q9UHP3 1055 aa16.74■□□□□ 0.27
SNHG28-201ENST00000368102 CYP46A1Q9Y6A2 500 aa16.74■□□□□ 0.27
SNHG28-201ENST00000368102 SLC27A2O14975 620 aa16.74■□□□□ 0.27
SNHG28-201ENST00000368102 MAP4K1Q92918 833 aa16.74■□□□□ 0.27
SNHG28-201ENST00000368102 AFDNP55196 1824 aaKnown RBP16.74■□□□□ 0.27
SNHG28-201ENST00000368102 ATP5JP18859 108 aa16.73■□□□□ 0.27
SNHG28-201ENST00000368102 CCDC129Q6ZRS4 1044 aa16.73■□□□□ 0.27
SNHG28-201ENST00000368102 MYRIPQ8NFW9 859 aa16.73■□□□□ 0.27
SNHG28-201ENST00000368102 SNRKQ9NRH2 765 aa16.73■□□□□ 0.27
SNHG28-201ENST00000368102 TMOD3Q9NYL9 352 aa16.73■□□□□ 0.27
SNHG28-201ENST00000368102 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.73■□□□□ 0.27
SNHG28-201ENST00000368102 ABCA3Q99758 1704 aa16.73■□□□□ 0.27
SNHG28-201ENST00000368102 TNS2Q63HR2 1409 aa16.73■□□□□ 0.27
SNHG28-201ENST00000368102 PRIMPOLQ96LW4 560 aa16.73■□□□□ 0.27
SNHG28-201ENST00000368102 DBNDD2Q9BQY9 259 aa16.73■□□□□ 0.27
SNHG28-201ENST00000368102 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.73■□□□□ 0.27
SNHG28-201ENST00000368102 UBR2Q8IWV8 1755 aa16.72■□□□□ 0.27
SNHG28-201ENST00000368102 VPS53Q5VIR6 699 aa16.72■□□□□ 0.27
SNHG28-201ENST00000368102 CDC37L1Q7L3B6 337 aa16.72■□□□□ 0.27
SNHG28-201ENST00000368102 SEC62Q99442 399 aaKnown RBP16.72■□□□□ 0.27
SNHG28-201ENST00000368102 TM6SF1Q9BZW5 370 aa16.72■□□□□ 0.27
SNHG28-201ENST00000368102 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
SNHG28-201ENST00000368102 CCDC191Q8NCU4 936 aa16.72■□□□□ 0.27
SNHG28-201ENST00000368102 BTG4Q9NY30 223 aa16.72■□□□□ 0.27
SNHG28-201ENST00000368102 KLHL34Q8N239 644 aa16.71■□□□□ 0.27
SNHG28-201ENST00000368102 C17orf53Q8N3J3 647 aaPredicted RBP16.71■□□□□ 0.27
SNHG28-201ENST00000368102 HMGN5P82970 282 aaKnown RBP16.71■□□□□ 0.27
SNHG28-201ENST00000368102 PLCB2Q00722 1185 aa16.71■□□□□ 0.27
SNHG28-201ENST00000368102 TMEM87AQ8NBN3 555 aa16.71■□□□□ 0.27
SNHG28-201ENST00000368102 ROBO1Q9Y6N7 1651 aa16.7■□□□□ 0.26
SNHG28-201ENST00000368102 CCDC183Q5T5S1 534 aa16.7■□□□□ 0.26
SNHG28-201ENST00000368102 PIBF1Q8WXW3 757 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms