RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 PI4KAP1Q8N8J0 262 aa18.78■□□□□ 0.6
SF3B5-201ENST00000367569 FAM89AQ96GI7 184 aa18.78■□□□□ 0.6
SF3B5-201ENST00000367569 RBM17Q96I25 401 aaKnown RBP18.78■□□□□ 0.6
SF3B5-201ENST00000367569 CRAMP1Q96RY5 1269 aa18.78■□□□□ 0.6
SF3B5-201ENST00000367569 BCL2L13Q9BXK5 485 aa18.78■□□□□ 0.6
SF3B5-201ENST00000367569 MYH3P11055 1940 aa18.78■□□□□ 0.6
SF3B5-201ENST00000367569 DDX58O95786 925 aaKnown RBP18.77■□□□□ 0.6
SF3B5-201ENST00000367569 FKBP5Q13451 457 aaPredicted RBP18.77■□□□□ 0.6
SF3B5-201ENST00000367569 CC2D2BQ6DHV5 1058 aa18.77■□□□□ 0.6
SF3B5-201ENST00000367569 SH3TC1Q8TE82 1336 aa18.76■□□□□ 0.59
SF3B5-201ENST00000367569 COL4A5P29400 1685 aa18.76■□□□□ 0.59
SF3B5-201ENST00000367569 CWF19L2Q2TBE0 894 aaKnown RBP18.76■□□□□ 0.59
SF3B5-201ENST00000367569 SLC10A5Q5PT55 438 aa18.76■□□□□ 0.59
SF3B5-201ENST00000367569 METTL22Q9BUU2 404 aaPredicted RBP18.76■□□□□ 0.59
SF3B5-201ENST00000367569 F6X3S4 739 aa18.75■□□□□ 0.59
SF3B5-201ENST00000367569 PPEF1O14829 653 aaPredicted RBP18.75■□□□□ 0.59
SF3B5-201ENST00000367569 KSR2Q6VAB6 950 aa18.75■□□□□ 0.59
SF3B5-201ENST00000367569 LDHDQ86WU2 507 aa18.75■□□□□ 0.59
SF3B5-201ENST00000367569 JDP2Q8WYK2 163 aa18.75■□□□□ 0.59
SF3B5-201ENST00000367569 NLRP3Q96P20 1036 aa18.75■□□□□ 0.59
SF3B5-201ENST00000367569 HACL1Q9UJ83 578 aa18.75■□□□□ 0.59
SF3B5-201ENST00000367569 RNF123Q5XPI4 1314 aa18.74■□□□□ 0.59
SF3B5-201ENST00000367569 IGKV5-2P06315 115 aa18.74■□□□□ 0.59
SF3B5-201ENST00000367569 EAPPQ56P03 285 aaPredicted RBP18.74■□□□□ 0.59
SF3B5-201ENST00000367569 CREBZFQ9NS37 354 aa18.74■□□□□ 0.59
SF3B5-201ENST00000367569 PASKQ96RG2 1323 aa18.74■□□□□ 0.59
SF3B5-201ENST00000367569 EPHX2P34913 555 aa18.73■□□□□ 0.59
SF3B5-201ENST00000367569 COL13A1Q5TAT6 717 aaPredicted RBP18.73■□□□□ 0.59
SF3B5-201ENST00000367569 GPC2Q8N158 579 aa18.73■□□□□ 0.59
SF3B5-201ENST00000367569 CHMP4AQ9BY43 222 aa18.73■□□□□ 0.59
SF3B5-201ENST00000367569 ABCC4O15439 1325 aa18.73■□□□□ 0.59
SF3B5-201ENST00000367569 LRRC37AA6NMS7 1700 aa18.72■□□□□ 0.59
SF3B5-201ENST00000367569 ITGBL1O95965 494 aaPredicted RBP18.72■□□□□ 0.59
SF3B5-201ENST00000367569 GRIPAP1Q4V328 841 aa18.72■□□□□ 0.59
SF3B5-201ENST00000367569 CCDC85AQ96PX6 553 aaPredicted RBP18.72■□□□□ 0.59
SF3B5-201ENST00000367569 CWC25Q9NXE8 425 aaPredicted RBP18.72■□□□□ 0.59
SF3B5-201ENST00000367569 MKRN1Q9UHC7 482 aaKnown RBP18.72■□□□□ 0.59
SF3B5-201ENST00000367569 ADAMTSL1Q8N6G6 1762 aa18.72■□□□□ 0.59
SF3B5-201ENST00000367569 IRS4O14654 1257 aaPredicted RBP18.71■□□□□ 0.59
SF3B5-201ENST00000367569 EIF6P56537 245 aaKnown RBP18.71■□□□□ 0.59
SF3B5-201ENST00000367569 LARGE2Q8N3Y3 721 aa18.71■□□□□ 0.59
SF3B5-201ENST00000367569 CLEC11AQ9Y240 323 aa18.71■□□□□ 0.59
SF3B5-201ENST00000367569 GJA3Q9Y6H8 435 aa18.71■□□□□ 0.59
SF3B5-201ENST00000367569 NEURL1BA8MQ27 555 aa18.7■□□□□ 0.58
SF3B5-201ENST00000367569 HSPA1AP0DMV8 641 aaKnown RBP18.7■□□□□ 0.58
SF3B5-201ENST00000367569 HSPA1BP0DMV9 641 aaKnown RBP18.7■□□□□ 0.58
SF3B5-201ENST00000367569 NEXNQ0ZGT2 675 aa18.7■□□□□ 0.58
SF3B5-201ENST00000367569 DNAAF4Q8WXU2 420 aa18.7■□□□□ 0.58
SF3B5-201ENST00000367569 ATP6V0A2Q9Y487 856 aa18.7■□□□□ 0.58
SF3B5-201ENST00000367569 PNMA8AQ86V59 439 aaPredicted RBP18.69■□□□□ 0.58
SF3B5-201ENST00000367569 CCDC191Q8NCU4 936 aa18.69■□□□□ 0.58
SF3B5-201ENST00000367569 SSH1Q8WYL5 1049 aa18.69■□□□□ 0.58
SF3B5-201ENST00000367569 LTBP1Q14766 1721 aa18.69■□□□□ 0.58
SF3B5-201ENST00000367569 TRIM28Q13263 835 aaKnown RBP18.68■□□□□ 0.58
SF3B5-201ENST00000367569 SLC4A10Q6U841 1118 aa18.68■□□□□ 0.58
SF3B5-201ENST00000367569 TRMT2AQ8IZ69 625 aaKnown RBP18.68■□□□□ 0.58
SF3B5-201ENST00000367569 MRPL50Q8N5N7 158 aaKnown RBP18.68■□□□□ 0.58
SF3B5-201ENST00000367569 ZBTB38Q8NAP3 1195 aaPredicted RBP18.68■□□□□ 0.58
SF3B5-201ENST00000367569 PPIP5K2O43314 1243 aa18.67■□□□□ 0.58
SF3B5-201ENST00000367569 PCCAP05165 728 aaPredicted RBP18.67■□□□□ 0.58
SF3B5-201ENST00000367569 AOC3Q16853 763 aa18.67■□□□□ 0.58
SF3B5-201ENST00000367569 MAP1SQ66K74 1059 aaPredicted RBP18.67■□□□□ 0.58
SF3B5-201ENST00000367569 UBE3BQ7Z3V4 1068 aa18.67■□□□□ 0.58
SF3B5-201ENST00000367569 TMX4Q9H1E5 349 aaPredicted RBP18.67■□□□□ 0.58
SF3B5-201ENST00000367569 SMC4Q9NTJ3 1288 aa18.67■□□□□ 0.58
SF3B5-201ENST00000367569 DUOX1Q9NRD9 1551 aa18.67■□□□□ 0.58
SF3B5-201ENST00000367569 TMEM88BA6NKF7 163 aa18.66■□□□□ 0.58
SF3B5-201ENST00000367569 BBOX1O75936 387 aa18.66■□□□□ 0.58
SF3B5-201ENST00000367569 SCNN1DP51172 638 aa18.66■□□□□ 0.58
SF3B5-201ENST00000367569 DDX46Q7L014 1031 aaKnown RBP18.66■□□□□ 0.58
SF3B5-201ENST00000367569 SP8Q8IXZ3 490 aa18.66■□□□□ 0.58
SF3B5-201ENST00000367569 NIM1KQ8IY84 436 aa18.66■□□□□ 0.58
SF3B5-201ENST00000367569 CNTROBQ8N137 903 aa18.66■□□□□ 0.58
SF3B5-201ENST00000367569 EPS15P42566 896 aa18.65■□□□□ 0.58
SF3B5-201ENST00000367569 CELF1Q92879 486 aaKnown RBP18.65■□□□□ 0.58
SF3B5-201ENST00000367569 RTFDC1Q9BY42 306 aaPredicted RBP18.65■□□□□ 0.58
SF3B5-201ENST00000367569 SEC31BQ9NQW1 1179 aa18.65■□□□□ 0.58
SF3B5-201ENST00000367569 CNTNAP1P78357 1384 aa18.65■□□□□ 0.58
SF3B5-201ENST00000367569 LMOD1P29536 600 aaPredicted RBP18.64■□□□□ 0.57
SF3B5-201ENST00000367569 GRAPQ13588 217 aa18.64■□□□□ 0.57
SF3B5-201ENST00000367569 GCKRQ14397 625 aa18.64■□□□□ 0.57
SF3B5-201ENST00000367569 GRAPLQ8TC17 118 aaPredicted RBP18.64■□□□□ 0.57
SF3B5-201ENST00000367569 VPS33BQ9H267 617 aa18.64■□□□□ 0.57
SF3B5-201ENST00000367569 DPP8Q6V1X1 898 aaPredicted RBP18.63■□□□□ 0.57
SF3B5-201ENST00000367569 MPNDQ8N594 471 aa18.63■□□□□ 0.57
SF3B5-201ENST00000367569 SUPT20HQ8NEM7 779 aa18.63■□□□□ 0.57
SF3B5-201ENST00000367569 LINS1Q8NG48 757 aa18.63■□□□□ 0.57
SF3B5-201ENST00000367569 CDHR2Q9BYE9 1310 aa18.63■□□□□ 0.57
SF3B5-201ENST00000367569 A0A1B0GUL6 1792 aa18.63■□□□□ 0.57
SF3B5-201ENST00000367569 PDE8AO60658 829 aa18.62■□□□□ 0.57
SF3B5-201ENST00000367569 VEGFBP49765 207 aa18.62■□□□□ 0.57
SF3B5-201ENST00000367569 CXCL9Q07325 125 aa18.62■□□□□ 0.57
SF3B5-201ENST00000367569 BEND3Q5T5X7 828 aa18.62■□□□□ 0.57
SF3B5-201ENST00000367569 ZNRF3Q9ULT6 936 aa18.62■□□□□ 0.57
SF3B5-201ENST00000367569 ZBED9Q6R2W3 1325 aa18.61■□□□□ 0.57
SF3B5-201ENST00000367569 CTSWP56202 376 aa18.61■□□□□ 0.57
SF3B5-201ENST00000367569 SF3B3Q15393 1217 aaKnown RBP18.61■□□□□ 0.57
SF3B5-201ENST00000367569 TNS4Q8IZW8 715 aa18.61■□□□□ 0.57
SF3B5-201ENST00000367569 FMR1Q06787 632 aaKnown RBP eCLIP18.6■□□□□ 0.57
SF3B5-201ENST00000367569 KIAA2012Q0VF49 1180 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms