RNA–Protein interactions for RNA: ENST00000367427.7

CFHR3-202, Transcript of complement factor H related 3, humanhuman

TSL 5

Gene CFHR3, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-202ENST00000367427 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.72□□□□□ -0.53
CFHR3-202ENST00000367427 ATG7O95352 703 aa11.71□□□□□ -0.53
CFHR3-202ENST00000367427 CCINQ13939 588 aa11.7□□□□□ -0.54
CFHR3-202ENST00000367427 DMRTC2Q8IXT2 367 aaPredicted RBP11.7□□□□□ -0.54
CFHR3-202ENST00000367427 MAFBQ9Y5Q3 323 aaPredicted RBP11.7□□□□□ -0.54
CFHR3-202ENST00000367427 CARNS1A5YM72 827 aa11.69□□□□□ -0.54
CFHR3-202ENST00000367427 GRIK5Q16478 980 aa11.69□□□□□ -0.54
CFHR3-202ENST00000367427 RTN1Q16799 776 aa11.69□□□□□ -0.54
CFHR3-202ENST00000367427 CDCA8Q53HL2 280 aa11.69□□□□□ -0.54
CFHR3-202ENST00000367427 FOXD4L4Q8WXT5 416 aaPredicted RBP11.69□□□□□ -0.54
CFHR3-202ENST00000367427 KRTAP4-12Q9BQ66 201 aa11.69□□□□□ -0.54
CFHR3-202ENST00000367427 VRTNQ9H8Y1 702 aa11.69□□□□□ -0.54
CFHR3-202ENST00000367427 TGFBR3LH3BV60 316 aa11.68□□□□□ -0.54
CFHR3-202ENST00000367427 SEC13P55735 322 aa11.68□□□□□ -0.54
CFHR3-202ENST00000367427 LRP8Q14114 963 aa11.68□□□□□ -0.54
CFHR3-202ENST00000367427 TP53INP1Q96A56 240 aa11.68□□□□□ -0.54
CFHR3-202ENST00000367427 NGLY1Q96IV0 654 aa11.68□□□□□ -0.54
CFHR3-202ENST00000367427 RGS9O75916 674 aaPredicted RBP11.67□□□□□ -0.54
CFHR3-202ENST00000367427 NFKB1P19838 968 aa11.67□□□□□ -0.54
CFHR3-202ENST00000367427 KRTAP1-3Q8IUG1 177 aa11.67□□□□□ -0.54
CFHR3-202ENST00000367427 HYAL3O43820 417 aaPredicted RBP11.66□□□□□ -0.54
CFHR3-202ENST00000367427 MAP3K6O95382 1288 aa11.66□□□□□ -0.54
CFHR3-202ENST00000367427 RASA1P20936 1047 aa11.66□□□□□ -0.54
CFHR3-202ENST00000367427 MSL1Q68DK7 614 aa11.66□□□□□ -0.54
CFHR3-202ENST00000367427 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
CFHR3-202ENST00000367427 RBM19Q9Y4C8 960 aaKnown RBP11.66□□□□□ -0.54
CFHR3-202ENST00000367427 ZBTB42B2RXF5 422 aa11.65□□□□□ -0.54
CFHR3-202ENST00000367427 INPP5BP32019 993 aa11.65□□□□□ -0.54
CFHR3-202ENST00000367427 FBXO11Q86XK2 927 aa11.65□□□□□ -0.54
CFHR3-202ENST00000367427 DTWD1Q8N5C7 304 aa11.65□□□□□ -0.54
CFHR3-202ENST00000367427 PNMA5Q96PV4 448 aa11.65□□□□□ -0.54
CFHR3-202ENST00000367427 LPIN3Q9BQK8 851 aa11.65□□□□□ -0.54
CFHR3-202ENST00000367427 FRRS1LQ9P0K9 344 aa11.65□□□□□ -0.54
CFHR3-202ENST00000367427 ZFATQ9P243 1243 aa11.65□□□□□ -0.54
CFHR3-202ENST00000367427 IVNS1ABPQ9Y6Y0 642 aa11.65□□□□□ -0.54
CFHR3-202ENST00000367427 TMEM88BA6NKF7 163 aa11.64□□□□□ -0.55
CFHR3-202ENST00000367427 USP21Q9UK80 565 aa11.64□□□□□ -0.55
CFHR3-202ENST00000367427 RBM25P49756 843 aaKnown RBP11.63□□□□□ -0.55
CFHR3-202ENST00000367427 PLAURQ03405 335 aa11.63□□□□□ -0.55
CFHR3-202ENST00000367427 NBPF11Q86T75 865 aa11.63□□□□□ -0.55
CFHR3-202ENST00000367427 FAM35AQ86V20 835 aa11.63□□□□□ -0.55
CFHR3-202ENST00000367427 TRPM4Q8TD43 1214 aa11.63□□□□□ -0.55
CFHR3-202ENST00000367427 PERM1Q5SV97 790 aa11.62□□□□□ -0.55
CFHR3-202ENST00000367427 WFDC12Q8WWY7 111 aa11.62□□□□□ -0.55
CFHR3-202ENST00000367427 TTC9Q92623 222 aa11.62□□□□□ -0.55
CFHR3-202ENST00000367427 C11orf16Q9NQ32 467 aa11.62□□□□□ -0.55
CFHR3-202ENST00000367427 IGFBP4P22692 258 aa11.61□□□□□ -0.55
CFHR3-202ENST00000367427 PTK7Q13308 1070 aa11.61□□□□□ -0.55
CFHR3-202ENST00000367427 PCSK7Q16549 785 aa11.61□□□□□ -0.55
CFHR3-202ENST00000367427 CCDC27Q2M243 656 aa11.61□□□□□ -0.55
CFHR3-202ENST00000367427 B4GALNT3Q6L9W6 998 aa11.61□□□□□ -0.55
CFHR3-202ENST00000367427 CPB1P15086 417 aa11.6□□□□□ -0.55
CFHR3-202ENST00000367427 CRTC2Q53ET0 693 aaPredicted RBP11.6□□□□□ -0.55
CFHR3-202ENST00000367427 KANK4Q5T7N3 995 aaPredicted RBP11.6□□□□□ -0.55
CFHR3-202ENST00000367427 SND1Q7KZF4 910 aaKnown RBP eCLIP11.6□□□□□ -0.55
CFHR3-202ENST00000367427 NOS3P29474 1203 aa11.59□□□□□ -0.55
CFHR3-202ENST00000367427 IFT43Q96FT9 208 aa11.59□□□□□ -0.55
CFHR3-202ENST00000367427 KLK14Q9P0G3 267 aa11.59□□□□□ -0.55
CFHR3-202ENST00000367427 LGR5O75473 907 aa11.58□□□□□ -0.56
CFHR3-202ENST00000367427 EPB42P16452 691 aa11.58□□□□□ -0.56
CFHR3-202ENST00000367427 TARSP26639 723 aaKnown RBP11.58□□□□□ -0.56
CFHR3-202ENST00000367427 IDH3AP50213 366 aa11.58□□□□□ -0.56
CFHR3-202ENST00000367427 DHX32Q7L7V1 743 aaKnown RBP11.58□□□□□ -0.56
CFHR3-202ENST00000367427 HINFPQ9BQA5 517 aa11.58□□□□□ -0.56
CFHR3-202ENST00000367427 IREB2P48200 963 aaKnown RBP11.57□□□□□ -0.56
CFHR3-202ENST00000367427 DPYDQ12882 1025 aa11.57□□□□□ -0.56
CFHR3-202ENST00000367427 ELOAQ14241 798 aaKnown RBP11.57□□□□□ -0.56
CFHR3-202ENST00000367427 IGF2-ASQ6U949 168 aa11.57□□□□□ -0.56
CFHR3-202ENST00000367427 ZNF428Q96B54 188 aa11.57□□□□□ -0.56
CFHR3-202ENST00000367427 DEAF1O75398 565 aaPredicted RBP11.56□□□□□ -0.56
CFHR3-202ENST00000367427 GPLD1P80108 840 aa11.56□□□□□ -0.56
CFHR3-202ENST00000367427 LARP1Q6PKG0 1096 aaKnown RBP11.56□□□□□ -0.56
CFHR3-202ENST00000367427 QTRT2Q9H974 415 aaKnown RBP11.56□□□□□ -0.56
CFHR3-202ENST00000367427 RNF112Q9ULX5 631 aa11.56□□□□□ -0.56
CFHR3-202ENST00000367427 LCE3BQ5TA77 95 aa11.55□□□□□ -0.56
CFHR3-202ENST00000367427 MEGF10Q96KG7 1140 aa11.55□□□□□ -0.56
CFHR3-202ENST00000367427 ELMSAN1Q6PJG2 1045 aa11.54□□□□□ -0.56
CFHR3-202ENST00000367427 KRT25Q7Z3Z0 450 aa11.54□□□□□ -0.56
CFHR3-202ENST00000367427 WFDC8Q8IUA0 241 aa11.54□□□□□ -0.56
CFHR3-202ENST00000367427 GNEQ9Y223 722 aaKnown RBP11.54□□□□□ -0.56
CFHR3-202ENST00000367427 E9PSI1 815 aa11.53□□□□□ -0.56
CFHR3-202ENST00000367427 DLL1O00548 723 aa11.53□□□□□ -0.56
CFHR3-202ENST00000367427 SASH3O75995 380 aa11.53□□□□□ -0.56
CFHR3-202ENST00000367427 MICAL2O94851 1124 aa11.53□□□□□ -0.56
CFHR3-202ENST00000367427 ARSDP51689 593 aa11.53□□□□□ -0.56
CFHR3-202ENST00000367427 DGKZQ13574 1117 aa11.53□□□□□ -0.56
CFHR3-202ENST00000367427 ANKMY2Q8IV38 441 aa11.53□□□□□ -0.56
CFHR3-202ENST00000367427 AMOTL2Q9Y2J4 779 aa11.53□□□□□ -0.56
CFHR3-202ENST00000367427 OPLAHO14841 1288 aa11.52□□□□□ -0.57
CFHR3-202ENST00000367427 WEE1P30291 646 aa11.52□□□□□ -0.57
CFHR3-202ENST00000367427 MLLT1Q03111 559 aaPredicted RBP11.52□□□□□ -0.57
CFHR3-202ENST00000367427 MYO19Q96H55 970 aa11.52□□□□□ -0.57
CFHR3-202ENST00000367427 FAM196BA6NMK8 535 aa11.51□□□□□ -0.57
CFHR3-202ENST00000367427 RARAP10276 462 aa11.51□□□□□ -0.57
CFHR3-202ENST00000367427 TMEM164Q5U3C3 297 aa11.51□□□□□ -0.57
CFHR3-202ENST00000367427 PRR23CQ6ZRP0 262 aa11.51□□□□□ -0.57
CFHR3-202ENST00000367427 DZIP1LQ8IYY4 767 aaKnown RBP11.51□□□□□ -0.57
CFHR3-202ENST00000367427 ZMIZ1Q9ULJ6 1067 aa11.51□□□□□ -0.57
CFHR3-202ENST00000367427 NOVA2Q9UNW9 492 aaKnown RBP11.51□□□□□ -0.57
CFHR3-202ENST00000367427 USP17L15C9J2P7 530 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms