RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 DNMT1P26358 1616 aaKnown RBP12.04□□□□□ -0.48
H3F3A-201ENST00000366813 NEURL1BA8MQ27 555 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 ATP9BO43861 1147 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 CD33P20138 364 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 TXLNAP40222 546 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 TEAD4Q15561 434 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 TBCELQ5QJ74 424 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 SLCO4C1Q6ZQN7 724 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 ANKLE2Q86XL3 938 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 PLEKHM2Q8IWE5 1019 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 GLMNQ92990 594 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 PRR12Q9ULL5 1215 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 A2ML1A8K2U0 1454 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 ARHGAP5Q13017 1502 aa12.04□□□□□ -0.48
H3F3A-201ENST00000366813 SUZ12Q15022 739 aaKnown RBP12.03□□□□□ -0.48
H3F3A-201ENST00000366813 MKRN1Q9UHC7 482 aaKnown RBP12.03□□□□□ -0.48
H3F3A-201ENST00000366813 MYO5CQ9NQX4 1742 aa12.02□□□□□ -0.49
H3F3A-201ENST00000366813 ZBTB7BO15156 539 aaPredicted RBP12.02□□□□□ -0.49
H3F3A-201ENST00000366813 GGT6Q6P531 493 aa12.02□□□□□ -0.49
H3F3A-201ENST00000366813 CCDC82Q8N4S0 544 aa12.02□□□□□ -0.49
H3F3A-201ENST00000366813 ZDHHC1Q8WTX9 485 aa12.02□□□□□ -0.49
H3F3A-201ENST00000366813 BTBD6Q96KE9 485 aa12.02□□□□□ -0.49
H3F3A-201ENST00000366813 CALR3Q96L12 384 aaKnown RBP12.02□□□□□ -0.49
H3F3A-201ENST00000366813 CHMP3Q9Y3E7 222 aa12.02□□□□□ -0.49
H3F3A-201ENST00000366813 CLTCQ00610 1675 aaKnown RBP12.01□□□□□ -0.49
H3F3A-201ENST00000366813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.01□□□□□ -0.49
H3F3A-201ENST00000366813 SERTM1A2A2V5 107 aa12.01□□□□□ -0.49
H3F3A-201ENST00000366813 EPXP11678 715 aa12.01□□□□□ -0.49
H3F3A-201ENST00000366813 PLA2G4EQ3MJ16 856 aa12.01□□□□□ -0.49
H3F3A-201ENST00000366813 FAM182BQ5T319 152 aa12.01□□□□□ -0.49
H3F3A-201ENST00000366813 OGFOD1Q8N543 542 aa12.01□□□□□ -0.49
H3F3A-201ENST00000366813 MARK1Q9P0L2 795 aa12.01□□□□□ -0.49
H3F3A-201ENST00000366813 NPHP4O75161 1426 aaPredicted RBP12□□□□□ -0.49
H3F3A-201ENST00000366813 PIK3R2O00459 728 aa12□□□□□ -0.49
H3F3A-201ENST00000366813 MSTNO14793 375 aa12□□□□□ -0.49
H3F3A-201ENST00000366813 FAM157BP0CG42 384 aa12□□□□□ -0.49
H3F3A-201ENST00000366813 ADH6P28332 368 aa12□□□□□ -0.49
H3F3A-201ENST00000366813 LARGE2Q8N3Y3 721 aa12□□□□□ -0.49
H3F3A-201ENST00000366813 UCN2Q96RP3 112 aa12□□□□□ -0.49
H3F3A-201ENST00000366813 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
H3F3A-201ENST00000366813 RNF17Q9BXT8 1623 aaKnown RBP12□□□□□ -0.49
H3F3A-201ENST00000366813 KIDINS220Q9ULH0 1771 aa11.99□□□□□ -0.49
H3F3A-201ENST00000366813 PALM3A6NDB9 673 aaPredicted RBP11.99□□□□□ -0.49
H3F3A-201ENST00000366813 EPHA4P54764 986 aa11.99□□□□□ -0.49
H3F3A-201ENST00000366813 CLDN10P78369 228 aa11.99□□□□□ -0.49
H3F3A-201ENST00000366813 LRRC69Q6ZNQ3 347 aa11.99□□□□□ -0.49
H3F3A-201ENST00000366813 KIAA1024Q9UPX6 916 aa11.99□□□□□ -0.49
H3F3A-201ENST00000366813 STRCP1A6NGW2 1772 aa11.99□□□□□ -0.49
H3F3A-201ENST00000366813 SAMD5Q5TGI4 173 aa11.98□□□□□ -0.49
H3F3A-201ENST00000366813 SERPINA10Q9UK55 444 aa11.98□□□□□ -0.49
H3F3A-201ENST00000366813 KIF14Q15058 1648 aa11.97□□□□□ -0.49
H3F3A-201ENST00000366813 CCDC97Q96F63 343 aaPredicted RBP11.97□□□□□ -0.49
H3F3A-201ENST00000366813 ARID3AQ99856 593 aa11.97□□□□□ -0.49
H3F3A-201ENST00000366813 AVENQ9NQS1 362 aaPredicted RBP11.97□□□□□ -0.49
H3F3A-201ENST00000366813 FAM135BQ49AJ0 1406 aa11.97□□□□□ -0.49
H3F3A-201ENST00000366813 EML1O00423 815 aa11.96□□□□□ -0.49
H3F3A-201ENST00000366813 PCBP4P57723 403 aaKnown RBP11.96□□□□□ -0.49
H3F3A-201ENST00000366813 LAMC2Q13753 1193 aa11.96□□□□□ -0.49
H3F3A-201ENST00000366813 RHPN1Q8TCX5 695 aa11.96□□□□□ -0.49
H3F3A-201ENST00000366813 TFIP11Q9UBB9 837 aaKnown RBP11.96□□□□□ -0.49
H3F3A-201ENST00000366813 PSMA6P60900 246 aaKnown RBP11.95□□□□□ -0.5
H3F3A-201ENST00000366813 GRIN2CQ14957 1233 aa11.95□□□□□ -0.5
H3F3A-201ENST00000366813 ALYREFQ86V81 257 aaKnown RBP11.95□□□□□ -0.5
H3F3A-201ENST00000366813 THEMISQ8N1K5 641 aaPredicted RBP11.95□□□□□ -0.5
H3F3A-201ENST00000366813 ZNF594Q96JF6 807 aaPredicted RBP11.95□□□□□ -0.5
H3F3A-201ENST00000366813 TSPAN10Q9H1Z9 355 aaPredicted RBP11.95□□□□□ -0.5
H3F3A-201ENST00000366813 HCN4Q9Y3Q4 1203 aa11.95□□□□□ -0.5
H3F3A-201ENST00000366813 MED14O60244 1454 aa11.94□□□□□ -0.5
H3F3A-201ENST00000366813 RASA1P20936 1047 aa11.94□□□□□ -0.5
H3F3A-201ENST00000366813 LINC00114Q6XXX2 140 aa11.94□□□□□ -0.5
H3F3A-201ENST00000366813 STRN4Q9NRL3 753 aa11.94□□□□□ -0.5
H3F3A-201ENST00000366813 HCN2Q9UL51 889 aa11.94□□□□□ -0.5
H3F3A-201ENST00000366813 GPC6Q9Y625 555 aaPredicted RBP11.94□□□□□ -0.5
H3F3A-201ENST00000366813 TNRQ92752 1358 aa11.94□□□□□ -0.5
H3F3A-201ENST00000366813 M0R2N6 131 aa11.93□□□□□ -0.5
H3F3A-201ENST00000366813 GNB5O14775 395 aa11.93□□□□□ -0.5
H3F3A-201ENST00000366813 ZNF468Q5VIY5 522 aaPredicted RBP11.93□□□□□ -0.5
H3F3A-201ENST00000366813 CHSY3Q70JA7 882 aa11.93□□□□□ -0.5
H3F3A-201ENST00000366813 SPOCK3Q9BQ16 436 aa11.93□□□□□ -0.5
H3F3A-201ENST00000366813 KLF15Q9UIH9 416 aa11.93□□□□□ -0.5
H3F3A-201ENST00000366813 ABCC1P33527 1531 aa11.93□□□□□ -0.5
H3F3A-201ENST00000366813 SFI1A8K8P3 1242 aa11.92□□□□□ -0.5
H3F3A-201ENST00000366813 SH3PXD2AQ5TCZ1 1133 aa11.92□□□□□ -0.5
H3F3A-201ENST00000366813 FCHSD1Q86WN1 690 aa11.92□□□□□ -0.5
H3F3A-201ENST00000366813 TSEN2Q8NCE0 465 aaKnown RBP11.92□□□□□ -0.5
H3F3A-201ENST00000366813 CDK11AQ9UQ88 783 aaPredicted RBP11.92□□□□□ -0.5
H3F3A-201ENST00000366813 SPAG9O60271 1321 aaKnown RBP11.92□□□□□ -0.5
H3F3A-201ENST00000366813 EFSO43281 561 aa11.91□□□□□ -0.5
H3F3A-201ENST00000366813 PPP1R12BO60237 982 aaPredicted RBP11.91□□□□□ -0.5
H3F3A-201ENST00000366813 ALAS2P22557 587 aa11.91□□□□□ -0.5
H3F3A-201ENST00000366813 RXRBP28702 533 aa11.91□□□□□ -0.5
H3F3A-201ENST00000366813 C1orf53Q5VUE5 145 aa11.91□□□□□ -0.5
H3F3A-201ENST00000366813 ZNF772Q68DY9 489 aaPredicted RBP11.91□□□□□ -0.5
H3F3A-201ENST00000366813 ANKIB1Q9P2G1 1089 aa11.91□□□□□ -0.5
H3F3A-201ENST00000366813 KRBA1A5PL33 1030 aa11.9□□□□□ -0.5
H3F3A-201ENST00000366813 COL8A1P27658 744 aa11.9□□□□□ -0.5
H3F3A-201ENST00000366813 LARP1Q6PKG0 1096 aaKnown RBP11.9□□□□□ -0.5
H3F3A-201ENST00000366813 SIX5Q8N196 739 aa11.9□□□□□ -0.5
H3F3A-201ENST00000366813 SUV39H2Q9H5I1 410 aa11.9□□□□□ -0.5
H3F3A-201ENST00000366813 SYNMO15061 1565 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms