RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 F6X3S4 739 aa17.47■□□□□ 0.39
MRPL55-205ENST00000366731 LARGE2Q8N3Y3 721 aa17.47■□□□□ 0.39
MRPL55-205ENST00000366731 MPNDQ8N594 471 aa17.47■□□□□ 0.39
MRPL55-205ENST00000366731 DNAAF4Q8WXU2 420 aa17.47■□□□□ 0.39
MRPL55-205ENST00000366731 JDP2Q8WYK2 163 aa17.47■□□□□ 0.39
MRPL55-205ENST00000366731 SEC31BQ9NQW1 1179 aa17.47■□□□□ 0.39
MRPL55-205ENST00000366731 ZNF541Q9H0D2 1346 aa17.46■□□□□ 0.39
MRPL55-205ENST00000366731 E9PSI1 815 aa17.46■□□□□ 0.39
MRPL55-205ENST00000366731 PDE8AO60658 829 aa17.46■□□□□ 0.39
MRPL55-205ENST00000366731 GRIPAP1Q4V328 841 aa17.46■□□□□ 0.39
MRPL55-205ENST00000366731 DPP8Q6V1X1 898 aaPredicted RBP17.46■□□□□ 0.39
MRPL55-205ENST00000366731 CCDC88AQ3V6T2 1871 aa17.46■□□□□ 0.38
MRPL55-205ENST00000366731 SNED1Q8TER0 1413 aa17.45■□□□□ 0.38
MRPL55-205ENST00000366731 POTECB2RU33 542 aa17.45■□□□□ 0.38
MRPL55-205ENST00000366731 PPIP5K2O43314 1243 aa17.45■□□□□ 0.38
MRPL55-205ENST00000366731 HSP90B1P14625 803 aaKnown RBP17.45■□□□□ 0.38
MRPL55-205ENST00000366731 SLFN5Q08AF3 891 aa17.45■□□□□ 0.38
MRPL55-205ENST00000366731 AOC3Q16853 763 aa17.45■□□□□ 0.38
MRPL55-205ENST00000366731 RPS8P62241 208 aaKnown RBP17.44■□□□□ 0.38
MRPL55-205ENST00000366731 CCDC152Q4G0S7 254 aa17.44■□□□□ 0.38
MRPL55-205ENST00000366731 UBE3BQ7Z3V4 1068 aa17.44■□□□□ 0.38
MRPL55-205ENST00000366731 GCKRQ14397 625 aa17.43■□□□□ 0.38
MRPL55-205ENST00000366731 NIM1KQ8IY84 436 aa17.43■□□□□ 0.38
MRPL55-205ENST00000366731 RBM46Q8TBY0 533 aaKnown RBP17.43■□□□□ 0.38
MRPL55-205ENST00000366731 NSFL1CQ9UNZ2 370 aaKnown RBP17.43■□□□□ 0.38
MRPL55-205ENST00000366731 GJA3Q9Y6H8 435 aa17.43■□□□□ 0.38
MRPL55-205ENST00000366731 TIAM2Q8IVF5 1701 aa17.43■□□□□ 0.38
MRPL55-205ENST00000366731 FZD9O00144 591 aa17.42■□□□□ 0.38
MRPL55-205ENST00000366731 HSPA6P17066 643 aa17.42■□□□□ 0.38
MRPL55-205ENST00000366731 EIF6P56537 245 aaKnown RBP17.42■□□□□ 0.38
MRPL55-205ENST00000366731 SUPT20HQ8NEM7 779 aa17.42■□□□□ 0.38
MRPL55-205ENST00000366731 LINS1Q8NG48 757 aa17.42■□□□□ 0.38
MRPL55-205ENST00000366731 H7C1W4 665 aa17.41■□□□□ 0.38
MRPL55-205ENST00000366731 CTSWP56202 376 aa17.41■□□□□ 0.38
MRPL55-205ENST00000366731 GPSM2P81274 684 aa17.41■□□□□ 0.38
MRPL55-205ENST00000366731 SLC4A10Q6U841 1118 aa17.41■□□□□ 0.38
MRPL55-205ENST00000366731 TMC4Q7Z404 712 aa17.41■□□□□ 0.38
MRPL55-205ENST00000366731 BCL2L13Q9BXK5 485 aa17.41■□□□□ 0.38
MRPL55-205ENST00000366731 CDHR2Q9BYE9 1310 aa17.41■□□□□ 0.38
MRPL55-205ENST00000366731 DDX60Q8IY21 1712 aaKnown RBP17.41■□□□□ 0.38
MRPL55-205ENST00000366731 LAMB2P55268 1798 aa17.4■□□□□ 0.38
MRPL55-205ENST00000366731 C6orf229H3BNL8 230 aa17.4■□□□□ 0.38
MRPL55-205ENST00000366731 RTFDC1Q9BY42 306 aaPredicted RBP17.4■□□□□ 0.38
MRPL55-205ENST00000366731 RIMBP2O15034 1052 aa17.39■□□□□ 0.38
MRPL55-205ENST00000366731 BEND3Q5T5X7 828 aa17.39■□□□□ 0.38
MRPL55-205ENST00000366731 TTLL11Q8NHH1 800 aa17.39■□□□□ 0.38
MRPL55-205ENST00000366731 GPR101Q96P66 508 aaPredicted RBP17.39■□□□□ 0.38
MRPL55-205ENST00000366731 GREM2Q9H772 168 aa17.39■□□□□ 0.38
MRPL55-205ENST00000366731 TAF1P21675 1872 aa17.39■□□□□ 0.37
MRPL55-205ENST00000366731 COL4A1P02462 1669 aa17.39■□□□□ 0.37
MRPL55-205ENST00000366731 COL4A5P29400 1685 aa17.39■□□□□ 0.37
MRPL55-205ENST00000366731 POTEIP0CG38 1075 aa17.38■□□□□ 0.37
MRPL55-205ENST00000366731 POTEJP0CG39 1038 aa17.38■□□□□ 0.37
MRPL55-205ENST00000366731 ANKRD18AQ8IVF6 992 aa17.38■□□□□ 0.37
MRPL55-205ENST00000366731 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
MRPL55-205ENST00000366731 SMC1BQ8NDV3 1235 aa17.38■□□□□ 0.37
MRPL55-205ENST00000366731 FSTL1Q12841 308 aa17.38■□□□□ 0.37
MRPL55-205ENST00000366731 EAPPQ56P03 285 aaPredicted RBP17.38■□□□□ 0.37
MRPL55-205ENST00000366731 SSH1Q8WYL5 1049 aa17.38■□□□□ 0.37
MRPL55-205ENST00000366731 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
MRPL55-205ENST00000366731 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
MRPL55-205ENST00000366731 IQCA1LA6NCM1 817 aa17.37■□□□□ 0.37
MRPL55-205ENST00000366731 CASP7P55210 303 aa17.37■□□□□ 0.37
MRPL55-205ENST00000366731 KIAA2012Q0VF49 1180 aa17.37■□□□□ 0.37
MRPL55-205ENST00000366731 WASHC4Q2M389 1173 aa17.37■□□□□ 0.37
MRPL55-205ENST00000366731 GPC2Q8N158 579 aa17.37■□□□□ 0.37
MRPL55-205ENST00000366731 L3MBTL3Q96JM7 780 aaPredicted RBP17.37■□□□□ 0.37
MRPL55-205ENST00000366731 VPS33BQ9H267 617 aa17.37■□□□□ 0.37
MRPL55-205ENST00000366731 TAF1DQ9H5J8 278 aaPredicted RBP17.37■□□□□ 0.37
MRPL55-205ENST00000366731 HACL1Q9UJ83 578 aa17.37■□□□□ 0.37
MRPL55-205ENST00000366731 ZNRF3Q9ULT6 936 aa17.37■□□□□ 0.37
MRPL55-205ENST00000366731 DICER1Q9UPY3 1922 aaKnown RBP17.36■□□□□ 0.37
MRPL55-205ENST00000366731 RAD17O75943 681 aa17.36■□□□□ 0.37
MRPL55-205ENST00000366731 HTRA3P83110 453 aa17.36■□□□□ 0.37
MRPL55-205ENST00000366731 CDC5LQ99459 802 aaKnown RBP17.36■□□□□ 0.37
MRPL55-205ENST00000366731 EPHX2P34913 555 aa17.35■□□□□ 0.37
MRPL55-205ENST00000366731 CXCL9Q07325 125 aa17.35■□□□□ 0.37
MRPL55-205ENST00000366731 DOK7Q18PE1 504 aa17.35■□□□□ 0.37
MRPL55-205ENST00000366731 TRMT2AQ8IZ69 625 aaKnown RBP17.35■□□□□ 0.37
MRPL55-205ENST00000366731 TBC1D16Q8TBP0 767 aa17.35■□□□□ 0.37
MRPL55-205ENST00000366731 DBNDD1Q9H9R9 158 aa17.35■□□□□ 0.37
MRPL55-205ENST00000366731 C9orf78Q9NZ63 289 aaPredicted RBP17.35■□□□□ 0.37
MRPL55-205ENST00000366731 CLEC11AQ9Y240 323 aa17.35■□□□□ 0.37
MRPL55-205ENST00000366731 CHMP3Q9Y3E7 222 aa17.35■□□□□ 0.37
MRPL55-205ENST00000366731 UFL1O94874 794 aa17.34■□□□□ 0.37
MRPL55-205ENST00000366731 FAM161AQ3B820 660 aa17.34■□□□□ 0.37
MRPL55-205ENST00000366731 WDR90Q96KV7 1748 aa17.34■□□□□ 0.37
MRPL55-205ENST00000366731 PLA2G12BQ9BX93 195 aa17.34■□□□□ 0.37
MRPL55-205ENST00000366731 SRCIN1Q9C0H9 1055 aa17.34■□□□□ 0.37
MRPL55-205ENST00000366731 SMC4Q9NTJ3 1288 aa17.34■□□□□ 0.37
MRPL55-205ENST00000366731 GGA1Q9UJY5 639 aa17.34■□□□□ 0.37
MRPL55-205ENST00000366731 YDJCA8MPS7 323 aa17.33■□□□□ 0.36
MRPL55-205ENST00000366731 ITGA6P23229 1130 aa17.33■□□□□ 0.36
MRPL55-205ENST00000366731 LMOD1P29536 600 aaPredicted RBP17.33■□□□□ 0.36
MRPL55-205ENST00000366731 EPS15P42566 896 aa17.33■□□□□ 0.36
MRPL55-205ENST00000366731 APLP1P51693 650 aa17.33■□□□□ 0.36
MRPL55-205ENST00000366731 EYA3Q99504 573 aa17.33■□□□□ 0.36
MRPL55-205ENST00000366731 WTIPA6NIX2 430 aaPredicted RBP17.32■□□□□ 0.36
MRPL55-205ENST00000366731 G3V3G9 751 aa17.32■□□□□ 0.36
MRPL55-205ENST00000366731 GRM8O00222 908 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms