RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 NEUROD2Q15784 382 aa14.49□□□□□ -0.09
CSNK1E-202ENST00000366216 PHACTR3Q96KR7 559 aa14.49□□□□□ -0.09
CSNK1E-202ENST00000366216 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
CSNK1E-202ENST00000366216 GPRC5DQ9NZD1 345 aa14.49□□□□□ -0.09
CSNK1E-202ENST00000366216 TAF1P21675 1872 aa14.48□□□□□ -0.09
CSNK1E-202ENST00000366216 IL16Q14005 1332 aa14.48□□□□□ -0.09
CSNK1E-202ENST00000366216 ANKRD36CQ5JPF3 1778 aa14.48□□□□□ -0.09
CSNK1E-202ENST00000366216 GNAT3A8MTJ3 354 aa14.48□□□□□ -0.09
CSNK1E-202ENST00000366216 NFE2L2Q16236 605 aa14.48□□□□□ -0.09
CSNK1E-202ENST00000366216 GLIS2Q9BZE0 524 aaPredicted RBP14.48□□□□□ -0.09
CSNK1E-202ENST00000366216 ZNF408Q9H9D4 720 aa14.48□□□□□ -0.09
CSNK1E-202ENST00000366216 TRIM35Q9UPQ4 493 aa14.48□□□□□ -0.09
CSNK1E-202ENST00000366216 RGL2O15211 777 aa14.47□□□□□ -0.09
CSNK1E-202ENST00000366216 RIPK4P57078 832 aa14.47□□□□□ -0.09
CSNK1E-202ENST00000366216 CRY2Q49AN0 593 aa14.47□□□□□ -0.09
CSNK1E-202ENST00000366216 GRIPAP1Q4V328 841 aa14.47□□□□□ -0.09
CSNK1E-202ENST00000366216 C3orf67Q6ZVT6 689 aa14.47□□□□□ -0.09
CSNK1E-202ENST00000366216 GTF2E1P29083 439 aaPredicted RBP14.46□□□□□ -0.09
CSNK1E-202ENST00000366216 DLK2Q6UY11 383 aa14.46□□□□□ -0.09
CSNK1E-202ENST00000366216 NUTM1Q86Y26 1132 aa14.46□□□□□ -0.09
CSNK1E-202ENST00000366216 NIM1KQ8IY84 436 aa14.46□□□□□ -0.09
CSNK1E-202ENST00000366216 SAGE1Q9NXZ1 904 aa14.46□□□□□ -0.09
CSNK1E-202ENST00000366216 PGAP2Q9UHJ9 254 aa14.46□□□□□ -0.09
CSNK1E-202ENST00000366216 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
CSNK1E-202ENST00000366216 BTBD11A6QL63 1104 aa14.45□□□□□ -0.1
CSNK1E-202ENST00000366216 RRP1P56182 461 aaKnown RBP14.45□□□□□ -0.1
CSNK1E-202ENST00000366216 LMOD3Q0VAK6 560 aa14.45□□□□□ -0.1
CSNK1E-202ENST00000366216 MYH16Q9H6N6 1097 aa14.45□□□□□ -0.1
CSNK1E-202ENST00000366216 RIC1Q4ADV7 1423 aa14.44□□□□□ -0.1
CSNK1E-202ENST00000366216 SHTN1A0MZ66 631 aa14.44□□□□□ -0.1
CSNK1E-202ENST00000366216 HIRAP54198 1017 aaPredicted RBP14.44□□□□□ -0.1
CSNK1E-202ENST00000366216 RPGRQ92834 1020 aaKnown RBP14.44□□□□□ -0.1
CSNK1E-202ENST00000366216 DDX60Q8IY21 1712 aaKnown RBP14.44□□□□□ -0.1
CSNK1E-202ENST00000366216 DLG5Q8TDM6 1919 aa14.43□□□□□ -0.1
CSNK1E-202ENST00000366216 PPIP5K2O43314 1243 aa14.43□□□□□ -0.1
CSNK1E-202ENST00000366216 HOXA10P31260 410 aaPredicted RBP14.43□□□□□ -0.1
CSNK1E-202ENST00000366216 GMPSP49915 693 aaPredicted RBP14.43□□□□□ -0.1
CSNK1E-202ENST00000366216 HUNKP57058 714 aa14.43□□□□□ -0.1
CSNK1E-202ENST00000366216 CALD1Q05682 793 aaKnown RBP14.43□□□□□ -0.1
CSNK1E-202ENST00000366216 CDC37L1Q7L3B6 337 aa14.43□□□□□ -0.1
CSNK1E-202ENST00000366216 GAS2L2Q8NHY3 880 aa14.43□□□□□ -0.1
CSNK1E-202ENST00000366216 ZC3H15Q8WU90 426 aaKnown RBP14.43□□□□□ -0.1
CSNK1E-202ENST00000366216 CDHR2Q9BYE9 1310 aa14.42□□□□□ -0.1
CSNK1E-202ENST00000366216 TCERG1O14776 1098 aaKnown RBP14.42□□□□□ -0.1
CSNK1E-202ENST00000366216 CXCL9Q07325 125 aa14.42□□□□□ -0.1
CSNK1E-202ENST00000366216 AOC3Q16853 763 aa14.42□□□□□ -0.1
CSNK1E-202ENST00000366216 NYXQ9GZU5 481 aa14.42□□□□□ -0.1
CSNK1E-202ENST00000366216 UBN2Q6ZU65 1347 aa14.41□□□□□ -0.1
CSNK1E-202ENST00000366216 FAM155AB1AL88 458 aaPredicted RBP14.41□□□□□ -0.1
CSNK1E-202ENST00000366216 PPEF1O14829 653 aaPredicted RBP14.41□□□□□ -0.1
CSNK1E-202ENST00000366216 TRPA1O75762 1119 aa14.41□□□□□ -0.1
CSNK1E-202ENST00000366216 SNRPA1P09661 255 aaKnown RBP14.41□□□□□ -0.1
CSNK1E-202ENST00000366216 CT47B1P0C2W7 299 aaPredicted RBP14.41□□□□□ -0.1
CSNK1E-202ENST00000366216 IRX6P78412 446 aaPredicted RBP14.41□□□□□ -0.1
CSNK1E-202ENST00000366216 DCTN1Q14203 1278 aa14.41□□□□□ -0.1
CSNK1E-202ENST00000366216 MCM10Q7L590 875 aa14.41□□□□□ -0.1
CSNK1E-202ENST00000366216 CTU1Q7Z7A3 348 aaKnown RBP14.41□□□□□ -0.1
CSNK1E-202ENST00000366216 ZNRF3Q9ULT6 936 aa14.41□□□□□ -0.1
CSNK1E-202ENST00000366216 RBBP6Q7Z6E9 1792 aaKnown RBP14.41□□□□□ -0.1
CSNK1E-202ENST00000366216 RGMBQ6NW40 437 aa14.4□□□□□ -0.1
CSNK1E-202ENST00000366216 TTLL7Q6ZT98 887 aa14.4□□□□□ -0.1
CSNK1E-202ENST00000366216 TRPM4Q8TD43 1214 aa14.4□□□□□ -0.1
CSNK1E-202ENST00000366216 GCC1Q96CN9 775 aa14.4□□□□□ -0.1
CSNK1E-202ENST00000366216 CRAMP1Q96RY5 1269 aa14.4□□□□□ -0.1
CSNK1E-202ENST00000366216 VPS33BQ9H267 617 aa14.4□□□□□ -0.1
CSNK1E-202ENST00000366216 RNF186Q9NXI6 227 aa14.4□□□□□ -0.1
CSNK1E-202ENST00000366216 MKI67P46013 3256 aaKnown RBP14.4□□□□□ -0.1
CSNK1E-202ENST00000366216 KDM3BQ7LBC6 1761 aa14.39□□□□□ -0.11
CSNK1E-202ENST00000366216 SUSD4Q5VX71 490 aa14.39□□□□□ -0.11
CSNK1E-202ENST00000366216 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.39□□□□□ -0.11
CSNK1E-202ENST00000366216 CCDC102AQ96A19 550 aa14.39□□□□□ -0.11
CSNK1E-202ENST00000366216 RBM17Q96I25 401 aaKnown RBP14.39□□□□□ -0.11
CSNK1E-202ENST00000366216 PPP4R2Q9NY27 417 aa14.39□□□□□ -0.11
CSNK1E-202ENST00000366216 MIS18AQ9NYP9 233 aa14.39□□□□□ -0.11
CSNK1E-202ENST00000366216 LRRC37AA6NMS7 1700 aa14.38□□□□□ -0.11
CSNK1E-202ENST00000366216 KIF23Q02241 960 aaPredicted RBP14.38□□□□□ -0.11
CSNK1E-202ENST00000366216 USP48Q86UV5 1035 aa14.38□□□□□ -0.11
CSNK1E-202ENST00000366216 BCL2L13Q9BXK5 485 aa14.38□□□□□ -0.11
CSNK1E-202ENST00000366216 HPS5Q9UPZ3 1129 aa14.38□□□□□ -0.11
CSNK1E-202ENST00000366216 PSME4Q14997 1843 aa14.38□□□□□ -0.11
CSNK1E-202ENST00000366216 FANCIQ9NVI1 1328 aa14.38□□□□□ -0.11
CSNK1E-202ENST00000366216 IBTKQ9P2D0 1353 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-202ENST00000366216 GPTP24298 496 aa14.37□□□□□ -0.11
CSNK1E-202ENST00000366216 TMX4Q9H1E5 349 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-202ENST00000366216 IFT57Q9NWB7 429 aa14.37□□□□□ -0.11
CSNK1E-202ENST00000366216 PAPPA2Q9BXP8 1791 aa14.37□□□□□ -0.11
CSNK1E-202ENST00000366216 YDJCA8MPS7 323 aa14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 HTATSF1O43719 755 aaKnown RBP14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 NTSR2O95665 410 aa14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 ZNF853P0CG23 659 aa14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 ZNF157P51786 506 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 GNAI1P63096 354 aa14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 TNIP1Q15025 636 aa14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 C2orf69Q8N8R5 385 aa14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 SUPT20HQ8NEM7 779 aa14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 GBA2Q9HCG7 927 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 CNOT7Q9UIV1 285 aaKnown RBP14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 ATP6V0A2Q9Y487 856 aa14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 SCN9AQ15858 1988 aa14.36□□□□□ -0.11
CSNK1E-202ENST00000366216 KIAA0100Q14667 2235 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms