RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 SRPK2P78362 688 aaKnown RBP8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 RTN1Q16799 776 aa8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 FAM182BQ5T319 152 aa8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 LRRC69Q6ZNQ3 347 aa8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 ALDH16A1Q8IZ83 802 aa8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 AFAP1Q8N556 730 aa8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 VTI1AQ96AJ9 217 aa8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 OXCT2Q9BYC2 517 aaPredicted RBP8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 ENAMQ9NRM1 1142 aa8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 GDF2Q9UK05 429 aaPredicted RBP8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 CLIP1P30622 1438 aa8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 C9orf84Q5VXU9 1444 aa8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 CDC42BPBQ9Y5S2 1711 aa8.42□□□□□ -1.06
RNU4-4P-201ENST00000364588 ARHGEF12Q9NZN5 1544 aa8.41□□□□□ -1.06
RNU4-4P-201ENST00000364588 ZNF518AQ6AHZ1 1483 aa8.41□□□□□ -1.06
RNU4-4P-201ENST00000364588 MAPTP10636 758 aaKnown RBP8.41□□□□□ -1.06
RNU4-4P-201ENST00000364588 WEE1P30291 646 aa8.41□□□□□ -1.06
RNU4-4P-201ENST00000364588 CEBPAP49715 358 aaPredicted RBP8.41□□□□□ -1.06
RNU4-4P-201ENST00000364588 TNP2Q05952 138 aa8.41□□□□□ -1.06
RNU4-4P-201ENST00000364588 HCN4Q9Y3Q4 1203 aa8.41□□□□□ -1.06
RNU4-4P-201ENST00000364588 RNF225M0QZC1 329 aaPredicted RBP8.4□□□□□ -1.06
RNU4-4P-201ENST00000364588 EFSO43281 561 aa8.4□□□□□ -1.06
RNU4-4P-201ENST00000364588 CELA2BP08218 269 aaPredicted RBP8.4□□□□□ -1.06
RNU4-4P-201ENST00000364588 BCRP11274 1271 aa8.4□□□□□ -1.06
RNU4-4P-201ENST00000364588 GOLGA6L1Q8N7Z2 621 aa8.4□□□□□ -1.06
RNU4-4P-201ENST00000364588 STK32AQ8WU08 396 aa8.4□□□□□ -1.06
RNU4-4P-201ENST00000364588 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.4□□□□□ -1.06
RNU4-4P-201ENST00000364588 KDM5CP41229 1560 aa8.39□□□□□ -1.07
RNU4-4P-201ENST00000364588 PPP1R15AO75807 674 aaPredicted RBP8.39□□□□□ -1.07
RNU4-4P-201ENST00000364588 SLCO4C1Q6ZQN7 724 aa8.39□□□□□ -1.07
RNU4-4P-201ENST00000364588 WHAMMQ8TF30 809 aa8.39□□□□□ -1.07
RNU4-4P-201ENST00000364588 ACDQ96AP0 544 aa8.39□□□□□ -1.07
RNU4-4P-201ENST00000364588 NGLY1Q96IV0 654 aa8.39□□□□□ -1.07
RNU4-4P-201ENST00000364588 AVENQ9NQS1 362 aaPredicted RBP8.39□□□□□ -1.07
RNU4-4P-201ENST00000364588 MARK1Q9P0L2 795 aa8.39□□□□□ -1.07
RNU4-4P-201ENST00000364588 PREX1Q8TCU6 1659 aa8.39□□□□□ -1.07
RNU4-4P-201ENST00000364588 PREX2Q70Z35 1606 aa8.39□□□□□ -1.07
RNU4-4P-201ENST00000364588 ABCA6Q8N139 1617 aa8.39□□□□□ -1.07
RNU4-4P-201ENST00000364588 DIP2CQ9Y2E4 1556 aa8.39□□□□□ -1.07
RNU4-4P-201ENST00000364588 CDC42BPAQ5VT25 1732 aa8.38□□□□□ -1.07
RNU4-4P-201ENST00000364588 ARAFP10398 606 aa8.38□□□□□ -1.07
RNU4-4P-201ENST00000364588 CD33P20138 364 aa8.38□□□□□ -1.07
RNU4-4P-201ENST00000364588 IER5Q5VY09 327 aa8.38□□□□□ -1.07
RNU4-4P-201ENST00000364588 LYPD4Q6UWN0 246 aa8.38□□□□□ -1.07
RNU4-4P-201ENST00000364588 C7orf43Q8WVR3 580 aa8.38□□□□□ -1.07
RNU4-4P-201ENST00000364588 KLRG1Q96E93 195 aa8.38□□□□□ -1.07
RNU4-4P-201ENST00000364588 HSH2DQ96JZ2 352 aa8.38□□□□□ -1.07
RNU4-4P-201ENST00000364588 SUSD3Q96L08 255 aa8.38□□□□□ -1.07
RNU4-4P-201ENST00000364588 C1orf115Q9H7X2 142 aa8.38□□□□□ -1.07
RNU4-4P-201ENST00000364588 ABCC1P33527 1531 aa8.38□□□□□ -1.07
RNU4-4P-201ENST00000364588 CCDC18Q5T9S5 1454 aa8.38□□□□□ -1.07
RNU4-4P-201ENST00000364588 CASKIN1Q8WXD9 1431 aa8.37□□□□□ -1.07
RNU4-4P-201ENST00000364588 TRAPPC8Q9Y2L5 1435 aa8.37□□□□□ -1.07
RNU4-4P-201ENST00000364588 ITSN2Q9NZM3 1697 aa8.37□□□□□ -1.07
RNU4-4P-201ENST00000364588 LGR5O75473 907 aa8.37□□□□□ -1.07
RNU4-4P-201ENST00000364588 ARHGEF15O94989 841 aa8.37□□□□□ -1.07
RNU4-4P-201ENST00000364588 CTBSQ01459 385 aa8.37□□□□□ -1.07
RNU4-4P-201ENST00000364588 TYRO3Q06418 890 aa8.37□□□□□ -1.07
RNU4-4P-201ENST00000364588 TMEM164Q5U3C3 297 aa8.37□□□□□ -1.07
RNU4-4P-201ENST00000364588 TGFBR3LH3BV60 316 aa8.36□□□□□ -1.07
RNU4-4P-201ENST00000364588 OIP5O43482 229 aa8.36□□□□□ -1.07
RNU4-4P-201ENST00000364588 ADH6P28332 368 aa8.36□□□□□ -1.07
RNU4-4P-201ENST00000364588 CEP63Q96MT8 703 aa8.36□□□□□ -1.07
RNU4-4P-201ENST00000364588 BRD7Q9NPI1 651 aa8.36□□□□□ -1.07
RNU4-4P-201ENST00000364588 C3P01024 1663 aa8.36□□□□□ -1.07
RNU4-4P-201ENST00000364588 REREQ9P2R6 1566 aa8.35□□□□□ -1.07
RNU4-4P-201ENST00000364588 STRCQ7RTU9 1775 aa8.35□□□□□ -1.07
RNU4-4P-201ENST00000364588 KIDINS220Q9ULH0 1771 aa8.35□□□□□ -1.07
RNU4-4P-201ENST00000364588 MLH3Q9UHC1 1453 aa8.35□□□□□ -1.07
RNU4-4P-201ENST00000364588 PRMT3O60678 531 aa8.35□□□□□ -1.07
RNU4-4P-201ENST00000364588 NEUROD1Q13562 356 aa8.35□□□□□ -1.07
RNU4-4P-201ENST00000364588 ZNF468Q5VIY5 522 aaPredicted RBP8.35□□□□□ -1.07
RNU4-4P-201ENST00000364588 CLP1Q92989 425 aaKnown RBP8.35□□□□□ -1.07
RNU4-4P-201ENST00000364588 MYO19Q96H55 970 aa8.35□□□□□ -1.07
RNU4-4P-201ENST00000364588 PRR12Q9ULL5 1215 aa8.35□□□□□ -1.07
RNU4-4P-201ENST00000364588 ADAMTS8Q9UP79 889 aa8.35□□□□□ -1.07
RNU4-4P-201ENST00000364588 FYCO1Q9BQS8 1478 aa8.34□□□□□ -1.07
RNU4-4P-201ENST00000364588 SETD1BQ9UPS6 1966 aaKnown RBP8.34□□□□□ -1.07
RNU4-4P-201ENST00000364588 C2CD2LO14523 706 aa8.34□□□□□ -1.07
RNU4-4P-201ENST00000364588 MARSP56192 900 aaKnown RBP8.34□□□□□ -1.07
RNU4-4P-201ENST00000364588 FKBP5Q13451 457 aaPredicted RBP8.34□□□□□ -1.07
RNU4-4P-201ENST00000364588 OCLNQ16625 522 aa8.34□□□□□ -1.07
RNU4-4P-201ENST00000364588 BTLAQ7Z6A9 289 aa8.34□□□□□ -1.07
RNU4-4P-201ENST00000364588 NEDD1Q8NHV4 660 aa8.34□□□□□ -1.07
RNU4-4P-201ENST00000364588 COL26A1Q96A83 441 aa8.34□□□□□ -1.07
RNU4-4P-201ENST00000364588 CXXC1Q9P0U4 656 aaPredicted RBP8.34□□□□□ -1.07
RNU4-4P-201ENST00000364588 GGA1Q9UJY5 639 aa8.34□□□□□ -1.07
RNU4-4P-201ENST00000364588 UHRF1BP1Q6BDS2 1440 aa8.34□□□□□ -1.07
RNU4-4P-201ENST00000364588 EPB42P16452 691 aa8.33□□□□□ -1.08
RNU4-4P-201ENST00000364588 KCNQ4P56696 695 aa8.33□□□□□ -1.08
RNU4-4P-201ENST00000364588 PODNQ7Z5L7 613 aa8.33□□□□□ -1.08
RNU4-4P-201ENST00000364588 SAMD9LQ8IVG5 1584 aa8.33□□□□□ -1.08
RNU4-4P-201ENST00000364588 ZNF280CQ8ND82 737 aa8.33□□□□□ -1.08
RNU4-4P-201ENST00000364588 SCARF2Q96GP6 870 aaPredicted RBP8.33□□□□□ -1.08
RNU4-4P-201ENST00000364588 PRIMPOLQ96LW4 560 aa8.33□□□□□ -1.08
RNU4-4P-201ENST00000364588 QTRT2Q9H974 415 aaKnown RBP8.33□□□□□ -1.08
RNU4-4P-201ENST00000364588 AGLP35573 1532 aa8.33□□□□□ -1.08
RNU4-4P-201ENST00000364588 SYCP2Q9BX26 1530 aa8.33□□□□□ -1.08
RNU4-4P-201ENST00000364588 DGKZQ13574 1117 aa8.32□□□□□ -1.08
RNU4-4P-201ENST00000364588 STRN4Q9NRL3 753 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms