RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 BMS1Q14692 1282 aaKnown RBP16.13■□□□□ 0.17
COL6A1-201ENST00000361866 ADCK5Q3MIX3 580 aa16.13■□□□□ 0.17
COL6A1-201ENST00000361866 TTC6Q86TZ1 520 aa16.13■□□□□ 0.17
COL6A1-201ENST00000361866 EPB41L2O43491 1005 aaKnown RBP16.13■□□□□ 0.17
COL6A1-201ENST00000361866 NOM1Q5C9Z4 860 aaKnown RBP16.13■□□□□ 0.17
COL6A1-201ENST00000361866 BICC1Q9H694 974 aaKnown RBP16.13■□□□□ 0.17
COL6A1-201ENST00000361866 BRMS1Q9HCU9 246 aa16.13■□□□□ 0.17
COL6A1-201ENST00000361866 SLC27A2O14975 620 aa16.13■□□□□ 0.17
COL6A1-201ENST00000361866 CASQ1P31415 396 aa16.13■□□□□ 0.17
COL6A1-201ENST00000361866 ANKRD13DQ6ZTN6 518 aa16.13■□□□□ 0.17
COL6A1-201ENST00000361866 LEO1Q8WVC0 666 aaPredicted RBP16.13■□□□□ 0.17
COL6A1-201ENST00000361866 MTMR6Q9Y217 621 aa16.13■□□□□ 0.17
COL6A1-201ENST00000361866 ZDHHC9Q9Y397 364 aa16.13■□□□□ 0.17
COL6A1-201ENST00000361866 PTPDC1A2A3K4 754 aa16.12■□□□□ 0.17
COL6A1-201ENST00000361866 CDKL5O76039 1030 aa16.12■□□□□ 0.17
COL6A1-201ENST00000361866 METTL24Q5JXM2 366 aa16.12■□□□□ 0.17
COL6A1-201ENST00000361866 LMBR1LQ6UX01 489 aa16.12■□□□□ 0.17
COL6A1-201ENST00000361866 NRBP1Q9UHY1 535 aa16.12■□□□□ 0.17
COL6A1-201ENST00000361866 ARHGEF5Q12774 1597 aa16.12■□□□□ 0.17
COL6A1-201ENST00000361866 CCDC47Q96A33 483 aaKnown RBP16.12■□□□□ 0.17
COL6A1-201ENST00000361866 TRIM34Q9BYJ4 488 aa16.12■□□□□ 0.17
COL6A1-201ENST00000361866 PATL2C9JE40 543 aaKnown RBP16.12■□□□□ 0.17
COL6A1-201ENST00000361866 AIDAQ96BJ3 306 aa16.12■□□□□ 0.17
COL6A1-201ENST00000361866 A0A087WWV3 80 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 AMOTQ4VCS5 1084 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL6A1-201ENST00000361866 SYKP43405 635 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 ZNF75DP51815 510 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 MCMDC2Q4G0Z9 681 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 GTPBP4Q9BZE4 634 aaKnown RBP16.11■□□□□ 0.17
COL6A1-201ENST00000361866 H0YHG0 523 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 ERLIN1O75477 346 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 TOM1L2Q6ZVM7 507 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 LINS1Q8NG48 757 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 DACH1Q9UI36 760 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 RXRAP19793 462 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 ELF2Q15723 593 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 KCNH5Q8NCM2 988 aa16.11■□□□□ 0.17
COL6A1-201ENST00000361866 TRPM1Q7Z4N2 1603 aa16.1■□□□□ 0.17
COL6A1-201ENST00000361866 DHX8Q14562 1220 aaKnown RBP16.1■□□□□ 0.17
COL6A1-201ENST00000361866 CALCOCO1Q9P1Z2 691 aa16.1■□□□□ 0.17
COL6A1-201ENST00000361866 ABCF2Q9UG63 623 aa16.1■□□□□ 0.17
COL6A1-201ENST00000361866 FLT4P35916 1363 aa16.1■□□□□ 0.17
COL6A1-201ENST00000361866 NR1I2O75469 434 aa16.1■□□□□ 0.17
COL6A1-201ENST00000361866 LMAN1P49257 510 aa16.1■□□□□ 0.17
COL6A1-201ENST00000361866 CCDC12Q8WUD4 166 aaPredicted RBP16.1■□□□□ 0.17
COL6A1-201ENST00000361866 MCM6Q14566 821 aa16.1■□□□□ 0.17
COL6A1-201ENST00000361866 KIF6Q6ZMV9 814 aa16.1■□□□□ 0.17
COL6A1-201ENST00000361866 TPCN1Q9ULQ1 816 aa16.1■□□□□ 0.17
COL6A1-201ENST00000361866 MINDY4BA8MYZ0 360 aa16.09■□□□□ 0.17
COL6A1-201ENST00000361866 UBAC1Q9BSL1 405 aa16.09■□□□□ 0.17
COL6A1-201ENST00000361866 RPS6KB1P23443 525 aa16.09■□□□□ 0.17
COL6A1-201ENST00000361866 TFCP2Q12800 502 aa16.09■□□□□ 0.17
COL6A1-201ENST00000361866 TAF3Q5VWG9 929 aa16.09■□□□□ 0.17
COL6A1-201ENST00000361866 KCNQ3O43525 872 aa16.09■□□□□ 0.17
COL6A1-201ENST00000361866 TIMM10P62072 90 aa16.09■□□□□ 0.17
COL6A1-201ENST00000361866 JAKMIP3Q5VZ66 844 aa16.09■□□□□ 0.17
COL6A1-201ENST00000361866 OGFRQ9NZT2 677 aa16.09■□□□□ 0.17
COL6A1-201ENST00000361866 IBTKQ9P2D0 1353 aaPredicted RBP16.09■□□□□ 0.17
COL6A1-201ENST00000361866 ATP7AQ04656 1500 aa16.09■□□□□ 0.17
COL6A1-201ENST00000361866 EIF3JO75822 258 aaKnown RBP16.08■□□□□ 0.17
COL6A1-201ENST00000361866 ALDH1L1O75891 902 aa16.08■□□□□ 0.17
COL6A1-201ENST00000361866 ZNF853P0CG23 659 aa16.08■□□□□ 0.17
COL6A1-201ENST00000361866 SETQ01105 290 aaPredicted RBP16.08■□□□□ 0.17
COL6A1-201ENST00000361866 ZNF397Q8NF99 534 aaPredicted RBP16.08■□□□□ 0.17
COL6A1-201ENST00000361866 GPTP24298 496 aa16.08■□□□□ 0.16
COL6A1-201ENST00000361866 CUL4AQ13619 759 aa16.08■□□□□ 0.16
COL6A1-201ENST00000361866 LRRIQ1Q96JM4 1722 aa16.08■□□□□ 0.16
COL6A1-201ENST00000361866 SPTLC2O15270 562 aa16.08■□□□□ 0.16
COL6A1-201ENST00000361866 LARGE1O95461 756 aa16.08■□□□□ 0.16
COL6A1-201ENST00000361866 NACAP1Q9BZK3 213 aa16.08■□□□□ 0.16
COL6A1-201ENST00000361866 IFIT3O14879 490 aaKnown RBP16.08■□□□□ 0.16
COL6A1-201ENST00000361866 KIF5CO60282 957 aa16.08■□□□□ 0.16
COL6A1-201ENST00000361866 CCDC102BQ68D86 513 aa16.08■□□□□ 0.16
COL6A1-201ENST00000361866 CCDC150Q8NCX0 1101 aa16.08■□□□□ 0.16
COL6A1-201ENST00000361866 FEZ1Q99689 392 aa16.08■□□□□ 0.16
COL6A1-201ENST00000361866 CLSTN2Q9H4D0 955 aa16.08■□□□□ 0.16
COL6A1-201ENST00000361866 GOLGA8AA7E2F4 631 aa16.07■□□□□ 0.16
COL6A1-201ENST00000361866 IARSP41252 1262 aaKnown RBP16.07■□□□□ 0.16
COL6A1-201ENST00000361866 TIGD1Q96MW7 591 aa16.07■□□□□ 0.16
COL6A1-201ENST00000361866 MPHOSPH8Q99549 860 aa16.07■□□□□ 0.16
COL6A1-201ENST00000361866 UTP14AQ9BVJ6 771 aaKnown RBP16.07■□□□□ 0.16
COL6A1-201ENST00000361866 NAPBQ9H115 298 aa16.07■□□□□ 0.16
COL6A1-201ENST00000361866 ZSCAN25Q6NSZ9 544 aa16.07■□□□□ 0.16
COL6A1-201ENST00000361866 IL17REQ8NFR9 667 aa16.07■□□□□ 0.16
COL6A1-201ENST00000361866 SSH3Q8TE77 659 aa16.07■□□□□ 0.16
COL6A1-201ENST00000361866 MAGEC2Q9UBF1 373 aaPredicted RBP16.07■□□□□ 0.16
COL6A1-201ENST00000361866 ANKRD24Q8TF21 1146 aa16.07■□□□□ 0.16
COL6A1-201ENST00000361866 DBNDD2Q9BQY9 259 aa16.07■□□□□ 0.16
COL6A1-201ENST00000361866 RAI14Q9P0K7 980 aa16.07■□□□□ 0.16
COL6A1-201ENST00000361866 DHX32Q7L7V1 743 aaKnown RBP16.06■□□□□ 0.16
COL6A1-201ENST00000361866 SLC26A6Q9BXS9 759 aa16.06■□□□□ 0.16
COL6A1-201ENST00000361866 LRP2BPQ9P2M1 347 aa16.06■□□□□ 0.16
COL6A1-201ENST00000361866 HOXC9P31274 260 aa16.06■□□□□ 0.16
COL6A1-201ENST00000361866 METAP2P50579 478 aaKnown RBP eCLIP16.06■□□□□ 0.16
COL6A1-201ENST00000361866 KARSQ15046 597 aaKnown RBP16.06■□□□□ 0.16
COL6A1-201ENST00000361866 DHX37Q8IY37 1157 aaKnown RBP16.06■□□□□ 0.16
COL6A1-201ENST00000361866 ALG1Q9BT22 464 aa16.06■□□□□ 0.16
COL6A1-201ENST00000361866 SLC12A7Q9Y666 1083 aa16.06■□□□□ 0.16
COL6A1-201ENST00000361866 A0A0D9SFI3 127 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms