RNA–Protein interactions for RNA: ENST00000361720.9

GPATCH3-201, Transcript of G-patch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH3, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-201ENST00000361720 POLA2Q14181 598 aa22.69■■□□□ 1.22
GPATCH3-201ENST00000361720 ZNF652Q9Y2D9 606 aa22.69■■□□□ 1.22
GPATCH3-201ENST00000361720 CLEC4GQ6UXB4 293 aa22.69■■□□□ 1.22
GPATCH3-201ENST00000361720 PA2G4Q9UQ80 394 aaKnown RBP22.69■■□□□ 1.22
GPATCH3-201ENST00000361720 SSFA2P28290 1259 aa22.68■■□□□ 1.22
GPATCH3-201ENST00000361720 SF3B2Q13435 895 aaKnown RBP22.68■■□□□ 1.22
GPATCH3-201ENST00000361720 MTX1Q13505 466 aa22.68■■□□□ 1.22
GPATCH3-201ENST00000361720 NUTM1Q86Y26 1132 aa22.68■■□□□ 1.22
GPATCH3-201ENST00000361720 KLHDC4Q8TBB5 520 aa22.68■■□□□ 1.22
GPATCH3-201ENST00000361720 TNPO1Q92973 898 aaKnown RBP22.67■■□□□ 1.22
GPATCH3-201ENST00000361720 GBP4Q96PP9 640 aa22.67■■□□□ 1.22
GPATCH3-201ENST00000361720 CCDC85AQ96PX6 553 aaPredicted RBP22.67■■□□□ 1.22
GPATCH3-201ENST00000361720 HMMRO75330 724 aa22.67■■□□□ 1.22
GPATCH3-201ENST00000361720 NTSR2O95665 410 aa22.67■■□□□ 1.22
GPATCH3-201ENST00000361720 ADRA2BP18089 450 aa22.67■■□□□ 1.22
GPATCH3-201ENST00000361720 LMBR1LQ6UX01 489 aa22.67■■□□□ 1.22
GPATCH3-201ENST00000361720 ISY1Q9ULR0 285 aaKnown RBP22.67■■□□□ 1.22
GPATCH3-201ENST00000361720 COL24A1Q17RW2 1714 aa22.67■■□□□ 1.22
GPATCH3-201ENST00000361720 DDX60Q8IY21 1712 aaKnown RBP22.67■■□□□ 1.22
GPATCH3-201ENST00000361720 BAG6P46379 1132 aa22.66■■□□□ 1.22
GPATCH3-201ENST00000361720 RABL6Q3YEC7 729 aaPredicted RBP22.66■■□□□ 1.22
GPATCH3-201ENST00000361720 COL23A1Q86Y22 540 aaPredicted RBP22.66■■□□□ 1.22
GPATCH3-201ENST00000361720 MYH3P11055 1940 aa22.66■■□□□ 1.22
GPATCH3-201ENST00000361720 SMARCA5O60264 1052 aaPredicted RBP22.66■■□□□ 1.22
GPATCH3-201ENST00000361720 GYS1P13807 737 aa22.66■■□□□ 1.22
GPATCH3-201ENST00000361720 CD2BP2O95400 341 aaKnown RBP22.65■■□□□ 1.22
GPATCH3-201ENST00000361720 HCLS1P14317 486 aaPredicted RBP22.65■■□□□ 1.22
GPATCH3-201ENST00000361720 RABEP1Q15276 862 aa22.65■■□□□ 1.22
GPATCH3-201ENST00000361720 UTP14AQ9BVJ6 771 aaKnown RBP22.65■■□□□ 1.22
GPATCH3-201ENST00000361720 IRS4O14654 1257 aaPredicted RBP22.64■■□□□ 1.22
GPATCH3-201ENST00000361720 CCDC24Q8N4L8 307 aa22.64■■□□□ 1.22
GPATCH3-201ENST00000361720 CHMP3Q9Y3E7 222 aa22.64■■□□□ 1.22
GPATCH3-201ENST00000361720 PNPLA7Q6ZV29 1317 aa22.64■■□□□ 1.21
GPATCH3-201ENST00000361720 XRCC6P12956 609 aaKnown RBP eCLIP22.64■■□□□ 1.21
GPATCH3-201ENST00000361720 PARP10Q53GL7 1025 aa22.64■■□□□ 1.21
GPATCH3-201ENST00000361720 CASZ1Q86V15 1759 aa22.64■■□□□ 1.21
GPATCH3-201ENST00000361720 CDHR2Q9BYE9 1310 aa22.63■■□□□ 1.21
GPATCH3-201ENST00000361720 HDAC5Q9UQL6 1122 aa22.63■■□□□ 1.21
GPATCH3-201ENST00000361720 SURF6O75683 361 aaKnown RBP22.63■■□□□ 1.21
GPATCH3-201ENST00000361720 RFX5P48382 616 aaPredicted RBP22.63■■□□□ 1.21
GPATCH3-201ENST00000361720 NFIXQ14938 502 aa22.63■■□□□ 1.21
GPATCH3-201ENST00000361720 SH3TC1Q8TE82 1336 aa22.62■■□□□ 1.21
GPATCH3-201ENST00000361720 HSP90AA1P07900 732 aaKnown RBP22.62■■□□□ 1.21
GPATCH3-201ENST00000361720 SKOR2Q2VWA4 1001 aaPredicted RBP22.62■■□□□ 1.21
GPATCH3-201ENST00000361720 GZF1Q9H116 711 aaPredicted RBP22.62■■□□□ 1.21
GPATCH3-201ENST00000361720 ERFEQ4G0M1 354 aa22.61■■□□□ 1.21
GPATCH3-201ENST00000361720 SETDB2Q96T68 719 aa22.61■■□□□ 1.21
GPATCH3-201ENST00000361720 SIL1Q9H173 461 aa22.61■■□□□ 1.21
GPATCH3-201ENST00000361720 ABCC12Q96J65 1359 aa22.61■■□□□ 1.21
GPATCH3-201ENST00000361720 LAMB2P55268 1798 aa22.61■■□□□ 1.21
GPATCH3-201ENST00000361720 MRE11P49959 708 aa22.61■■□□□ 1.21
GPATCH3-201ENST00000361720 CLEC17AQ6ZS10 378 aa22.61■■□□□ 1.21
GPATCH3-201ENST00000361720 C16orf71Q8IYS4 520 aaPredicted RBP22.61■■□□□ 1.21
GPATCH3-201ENST00000361720 PLA2G12BQ9BX93 195 aa22.61■■□□□ 1.21
GPATCH3-201ENST00000361720 USP26Q9BXU7 913 aa22.61■■□□□ 1.21
GPATCH3-201ENST00000361720 CASC1Q6TDU7 716 aa22.6■■□□□ 1.21
GPATCH3-201ENST00000361720 SLC15A2Q16348 729 aa22.6■■□□□ 1.21
GPATCH3-201ENST00000361720 C3orf67Q6ZVT6 689 aa22.6■■□□□ 1.21
GPATCH3-201ENST00000361720 ZNF594Q96JF6 807 aaPredicted RBP22.6■■□□□ 1.21
GPATCH3-201ENST00000361720 PDGFDQ9GZP0 370 aaPredicted RBP22.6■■□□□ 1.21
GPATCH3-201ENST00000361720 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.6■■□□□ 1.21
GPATCH3-201ENST00000361720 RGL2O15211 777 aa22.59■■□□□ 1.21
GPATCH3-201ENST00000361720 CTSWP56202 376 aa22.58■■□□□ 1.21
GPATCH3-201ENST00000361720 PTPN12Q05209 780 aaKnown RBP22.58■■□□□ 1.21
GPATCH3-201ENST00000361720 TTLL11Q8NHH1 800 aa22.58■■□□□ 1.21
GPATCH3-201ENST00000361720 OTUD7AQ8TE49 926 aaPredicted RBP22.58■■□□□ 1.21
GPATCH3-201ENST00000361720 GREM2Q9H772 168 aa22.58■■□□□ 1.21
GPATCH3-201ENST00000361720 COL4A1P02462 1669 aa22.58■■□□□ 1.21
GPATCH3-201ENST00000361720 SDSP20132 328 aa22.58■■□□□ 1.2
GPATCH3-201ENST00000361720 NBPF5PQ86XG9 351 aaPredicted RBP22.58■■□□□ 1.2
GPATCH3-201ENST00000361720 CSF1RP07333 972 aa22.57■■□□□ 1.2
GPATCH3-201ENST00000361720 MSL1Q68DK7 614 aa22.57■■□□□ 1.2
GPATCH3-201ENST00000361720 IL1RAPL2Q9NP60 686 aa22.57■■□□□ 1.2
GPATCH3-201ENST00000361720 TAF1P21675 1872 aa22.57■■□□□ 1.2
GPATCH3-201ENST00000361720 PDE8AO60658 829 aa22.57■■□□□ 1.2
GPATCH3-201ENST00000361720 DDR1Q08345 913 aa22.57■■□□□ 1.2
GPATCH3-201ENST00000361720 OSBPL3Q9H4L5 887 aa22.57■■□□□ 1.2
GPATCH3-201ENST00000361720 STK32BQ9NY57 414 aa22.57■■□□□ 1.2
GPATCH3-201ENST00000361720 TNRC6CQ9HCJ0 1690 aaKnown RBP22.56■■□□□ 1.2
GPATCH3-201ENST00000361720 CARMIL3Q8ND23 1372 aa22.55■■□□□ 1.2
GPATCH3-201ENST00000361720 TM4SF1P30408 202 aa22.55■■□□□ 1.2
GPATCH3-201ENST00000361720 QSER1Q2KHR3 1735 aa22.55■■□□□ 1.2
GPATCH3-201ENST00000361720 OS9Q13438 667 aaPredicted RBP22.54■■□□□ 1.2
GPATCH3-201ENST00000361720 UPF1Q92900 1129 aaKnown RBP eCLIP22.54■■□□□ 1.29e-6■■■■□ 19.8
GPATCH3-201ENST00000361720 LRRCC1Q9C099 1032 aa22.54■■□□□ 1.2
GPATCH3-201ENST00000361720 SASH1O94885 1247 aa22.54■■□□□ 1.2
GPATCH3-201ENST00000361720 HMGB2P26583 209 aaKnown RBP22.54■■□□□ 1.2
GPATCH3-201ENST00000361720 GTF2E1P29083 439 aaPredicted RBP22.54■■□□□ 1.2
GPATCH3-201ENST00000361720 RHPN1Q8TCX5 695 aa22.54■■□□□ 1.2
GPATCH3-201ENST00000361720 PUS3Q9BZE2 481 aaKnown RBP22.54■■□□□ 1.2
GPATCH3-201ENST00000361720 COPRSQ9NQ92 184 aa22.54■■□□□ 1.2
GPATCH3-201ENST00000361720 SPEF2Q9C093 1822 aa22.53■■□□□ 1.2
GPATCH3-201ENST00000361720 REC8O95072 547 aa22.53■■□□□ 1.2
GPATCH3-201ENST00000361720 GRPEL1Q9HAV7 217 aa22.53■■□□□ 1.2
GPATCH3-201ENST00000361720 ITGA6P23229 1130 aa22.52■■□□□ 1.2
GPATCH3-201ENST00000361720 LRRC24Q50LG9 513 aa22.52■■□□□ 1.2
GPATCH3-201ENST00000361720 CCDC125Q86Z20 511 aa22.52■■□□□ 1.2
GPATCH3-201ENST00000361720 SEC31BQ9NQW1 1179 aa22.52■■□□□ 1.2
GPATCH3-201ENST00000361720 FOXD4L1Q9NU39 408 aa22.52■■□□□ 1.2
GPATCH3-201ENST00000361720 GOLGA6L22H0YM25 854 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms