RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 CRKLP46109 303 aaKnown RBP14.91□□□□□ -0.02
UBA3-202ENST00000361055 KSR2Q6VAB6 950 aa14.91□□□□□ -0.02
UBA3-202ENST00000361055 PI4KAP1Q8N8J0 262 aa14.91□□□□□ -0.02
UBA3-202ENST00000361055 ZBTB1Q9Y2K1 713 aa14.91□□□□□ -0.02
UBA3-202ENST00000361055 USP42Q9H9J4 1324 aaKnown RBP14.9□□□□□ -0.02
UBA3-202ENST00000361055 ARFGEF2Q9Y6D5 1785 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 PHF14O94880 888 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 BEND3Q5T5X7 828 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 KIAA1211Q6ZU35 1233 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 CNTROBQ8N137 903 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 TSPY26PQ9H489 355 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 CCDC87Q9NVE4 849 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 CCDC39Q9UFE4 941 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 ADCY9O60503 1353 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 RAD50Q92878 1312 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 PLSCR1O15162 318 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 SRGAP3O43295 1099 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 IL6STP40189 918 aaPredicted RBP14.9□□□□□ -0.02
UBA3-202ENST00000361055 INTS5Q6P9B9 1019 aaKnown RBP14.9□□□□□ -0.02
UBA3-202ENST00000361055 KLHL34Q8N239 644 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 TMEM87AQ8NBN3 555 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 LINC00116Q8NCU8 138 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 DNAAF4Q8WXU2 420 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 TTC14Q96N46 770 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 LSG1Q9H089 658 aaKnown RBP14.9□□□□□ -0.02
UBA3-202ENST00000361055 IL25Q9H293 177 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.9□□□□□ -0.02
UBA3-202ENST00000361055 ZKSCAN5Q9Y2L8 839 aa14.9□□□□□ -0.02
UBA3-202ENST00000361055 RGPD3A6NKT7 1758 aaPredicted RBP14.89□□□□□ -0.03
UBA3-202ENST00000361055 RGPD4Q7Z3J3 1758 aa14.89□□□□□ -0.03
UBA3-202ENST00000361055 SLC27A3Q5K4L6 730 aa14.89□□□□□ -0.03
UBA3-202ENST00000361055 ANKRD13DQ6ZTN6 518 aa14.89□□□□□ -0.03
UBA3-202ENST00000361055 MAP3K2Q9Y2U5 619 aa14.89□□□□□ -0.03
UBA3-202ENST00000361055 SNX14Q9Y5W7 946 aa14.89□□□□□ -0.03
UBA3-202ENST00000361055 TTC41PQ6P2S7 1318 aa14.89□□□□□ -0.03
UBA3-202ENST00000361055 CNTNAP4Q9C0A0 1308 aa14.89□□□□□ -0.03
UBA3-202ENST00000361055 APBA3O96018 575 aa14.88□□□□□ -0.03
UBA3-202ENST00000361055 KCNQ4P56696 695 aa14.88□□□□□ -0.03
UBA3-202ENST00000361055 NOL8Q76FK4 1167 aaKnown RBP14.88□□□□□ -0.03
UBA3-202ENST00000361055 RIC3Q7Z5B4 369 aa14.88□□□□□ -0.03
UBA3-202ENST00000361055 USP48Q86UV5 1035 aa14.88□□□□□ -0.03
UBA3-202ENST00000361055 NUP188Q5SRE5 1749 aa14.88□□□□□ -0.03
UBA3-202ENST00000361055 NBPF7P0C2Y1 421 aaPredicted RBP14.88□□□□□ -0.03
UBA3-202ENST00000361055 HMGB2P26583 209 aaKnown RBP14.88□□□□□ -0.03
UBA3-202ENST00000361055 UVSSAQ2YD98 709 aa14.88□□□□□ -0.03
UBA3-202ENST00000361055 RC3H1Q5TC82 1133 aaKnown RBP14.88□□□□□ -0.03
UBA3-202ENST00000361055 PLBD2Q8NHP8 589 aa14.88□□□□□ -0.03
UBA3-202ENST00000361055 LIMCH1Q9UPQ0 1083 aa14.88□□□□□ -0.03
UBA3-202ENST00000361055 ZNF330Q9Y3S2 320 aaPredicted RBP14.88□□□□□ -0.03
UBA3-202ENST00000361055 GLRX3O76003 335 aaKnown RBP14.87□□□□□ -0.03
UBA3-202ENST00000361055 MTX1Q13505 466 aa14.87□□□□□ -0.03
UBA3-202ENST00000361055 CSPP1Q1MSJ5 1256 aa14.87□□□□□ -0.03
UBA3-202ENST00000361055 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.87□□□□□ -0.03
UBA3-202ENST00000361055 C4BP0C0L5 1744 aa14.87□□□□□ -0.03
UBA3-202ENST00000361055 LETM1O95202 739 aaPredicted RBP14.87□□□□□ -0.03
UBA3-202ENST00000361055 EIF5P55010 431 aaKnown RBP14.87□□□□□ -0.03
UBA3-202ENST00000361055 TTLL7Q6ZT98 887 aa14.87□□□□□ -0.03
UBA3-202ENST00000361055 FAM184AQ8NB25 1140 aa14.87□□□□□ -0.03
UBA3-202ENST00000361055 RUFY2Q8WXA3 655 aa14.87□□□□□ -0.03
UBA3-202ENST00000361055 HDAC5Q9UQL6 1122 aa14.87□□□□□ -0.03
UBA3-202ENST00000361055 GLIPR1L2Q4G1C9 344 aa14.86□□□□□ -0.03
UBA3-202ENST00000361055 LRRC4BQ9NT99 713 aa14.86□□□□□ -0.03
UBA3-202ENST00000361055 GADD45BO75293 160 aaPredicted RBP14.85□□□□□ -0.03
UBA3-202ENST00000361055 MAP4K4O95819 1239 aaPredicted RBP14.85□□□□□ -0.03
UBA3-202ENST00000361055 ZSCAN22P10073 491 aaPredicted RBP14.85□□□□□ -0.03
UBA3-202ENST00000361055 TXNRD1Q16881 649 aa14.85□□□□□ -0.03
UBA3-202ENST00000361055 KIF6Q6ZMV9 814 aa14.85□□□□□ -0.03
UBA3-202ENST00000361055 NEXNQ0ZGT2 675 aa14.85□□□□□ -0.03
UBA3-202ENST00000361055 RASEFQ8IZ41 740 aa14.85□□□□□ -0.03
UBA3-202ENST00000361055 KCNB2Q92953 911 aa14.85□□□□□ -0.03
UBA3-202ENST00000361055 METTL22Q9BUU2 404 aaPredicted RBP14.85□□□□□ -0.03
UBA3-202ENST00000361055 AFDNP55196 1824 aaKnown RBP14.85□□□□□ -0.03
UBA3-202ENST00000361055 ALDH1L1O75891 902 aa14.84□□□□□ -0.03
UBA3-202ENST00000361055 AK2P54819 239 aa14.84□□□□□ -0.03
UBA3-202ENST00000361055 TM6SF1Q9BZW5 370 aa14.84□□□□□ -0.03
UBA3-202ENST00000361055 ATP6V1DQ9Y5K8 247 aa14.84□□□□□ -0.03
UBA3-202ENST00000361055 NUP98P52948 1817 aa14.84□□□□□ -0.03
UBA3-202ENST00000361055 RUFY3Q7L099 469 aa14.84□□□□□ -0.03
UBA3-202ENST00000361055 DZIP3Q86Y13 1208 aaKnown RBP14.84□□□□□ -0.03
UBA3-202ENST00000361055 PROM2Q8N271 834 aa14.84□□□□□ -0.03
UBA3-202ENST00000361055 CLASRPQ8N2M8 674 aaKnown RBP14.84□□□□□ -0.03
UBA3-202ENST00000361055 LINS1Q8NG48 757 aa14.84□□□□□ -0.03
UBA3-202ENST00000361055 ZSCAN31Q96LW9 406 aaPredicted RBP14.84□□□□□ -0.03
UBA3-202ENST00000361055 MAP3K15Q6ZN16 1313 aa14.84□□□□□ -0.03
UBA3-202ENST00000361055 COL15A1P39059 1388 aa14.83□□□□□ -0.03
UBA3-202ENST00000361055 RPAP1Q9BWH6 1393 aaPredicted RBP14.83□□□□□ -0.03
UBA3-202ENST00000361055 STX6O43752 255 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 RPS6KA4O75676 772 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 CCDC183Q5T5S1 534 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 CWC27Q6UX04 472 aaKnown RBP14.83□□□□□ -0.04
UBA3-202ENST00000361055 ERC1Q8IUD2 1116 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 RNF214Q8ND24 703 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 ZBTB3Q9H5J0 574 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 ANKRD36CQ5JPF3 1778 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 SYT1P21579 422 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 UBE2HP62256 183 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 VPS53Q5VIR6 699 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 MYD88Q99836 296 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 GDPD2Q9HCC8 539 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 ECHDC1Q9NTX5 307 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms