RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 NOB1Q9ULX3 412 aaKnown RBP9.21□□□□□ -0.93
CLCN3-202ENST00000360642 DOLKQ9UPQ8 538 aa9.21□□□□□ -0.93
CLCN3-202ENST00000360642 CPS1P31327 1500 aa9.21□□□□□ -0.94
CLCN3-202ENST00000360642 PRKAR2BP31323 418 aa9.21□□□□□ -0.94
CLCN3-202ENST00000360642 IL13P35225 146 aa9.21□□□□□ -0.94
CLCN3-202ENST00000360642 ALDH1L2Q3SY69 923 aa9.21□□□□□ -0.94
CLCN3-202ENST00000360642 KMT5BQ4FZB7 885 aa9.21□□□□□ -0.94
CLCN3-202ENST00000360642 MON2Q7Z3U7 1717 aa9.21□□□□□ -0.94
CLCN3-202ENST00000360642 THAP11Q96EK4 314 aa9.21□□□□□ -0.94
CLCN3-202ENST00000360642 ARHGAP9Q9BRR9 750 aa9.21□□□□□ -0.94
CLCN3-202ENST00000360642 DDX19BQ9UMR2 479 aa9.21□□□□□ -0.94
CLCN3-202ENST00000360642 CDK12Q9NYV4 1490 aaPredicted RBP9.21□□□□□ -0.94
CLCN3-202ENST00000360642 ARHGAP33O14559 1287 aa9.2□□□□□ -0.94
CLCN3-202ENST00000360642 DESI1Q6ICB0 168 aa9.2□□□□□ -0.94
CLCN3-202ENST00000360642 ZBTB33Q86T24 672 aa9.2□□□□□ -0.94
CLCN3-202ENST00000360642 KIF13AQ9H1H9 1805 aa9.2□□□□□ -0.94
CLCN3-202ENST00000360642 ERBB3P21860 1342 aa9.2□□□□□ -0.94
CLCN3-202ENST00000360642 PSDA5PKW4 1024 aaPredicted RBP9.2□□□□□ -0.94
CLCN3-202ENST00000360642 ACTN4O43707 911 aaKnown RBP9.2□□□□□ -0.94
CLCN3-202ENST00000360642 PHACTR3Q96KR7 559 aa9.2□□□□□ -0.94
CLCN3-202ENST00000360642 PCDHB3Q9Y5E6 796 aa9.2□□□□□ -0.94
CLCN3-202ENST00000360642 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
CLCN3-202ENST00000360642 SP7Q8TDD2 431 aaPredicted RBP9.2□□□□□ -0.94
CLCN3-202ENST00000360642 NUDT16Q96DE0 195 aaKnown RBP9.2□□□□□ -0.94
CLCN3-202ENST00000360642 LRCH3Q96II8 777 aa9.2□□□□□ -0.94
CLCN3-202ENST00000360642 AKAP12Q02952 1782 aa9.19□□□□□ -0.94
CLCN3-202ENST00000360642 NFE2L2Q16236 605 aa9.19□□□□□ -0.94
CLCN3-202ENST00000360642 NME9Q86XW9 330 aa9.19□□□□□ -0.94
CLCN3-202ENST00000360642 ZBTB40Q9NUA8 1239 aa9.19□□□□□ -0.94
CLCN3-202ENST00000360642 EMILIN1Q9Y6C2 1016 aa9.19□□□□□ -0.94
CLCN3-202ENST00000360642 KIF16BQ96L93 1317 aa9.19□□□□□ -0.94
CLCN3-202ENST00000360642 C3P01024 1663 aa9.19□□□□□ -0.94
CLCN3-202ENST00000360642 FAM205CA6NFA0 338 aa9.19□□□□□ -0.94
CLCN3-202ENST00000360642 CCNYL3P0C7X3 344 aa9.19□□□□□ -0.94
CLCN3-202ENST00000360642 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.19□□□□□ -0.94
CLCN3-202ENST00000360642 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.19□□□□□ -0.94
CLCN3-202ENST00000360642 CXXC1Q9P0U4 656 aaPredicted RBP9.19□□□□□ -0.94
CLCN3-202ENST00000360642 NFKBIBQ15653 356 aa9.18□□□□□ -0.94
CLCN3-202ENST00000360642 TMEM57Q8N5G2 664 aa9.18□□□□□ -0.94
CLCN3-202ENST00000360642 UBR1Q8IWV7 1749 aa9.18□□□□□ -0.94
CLCN3-202ENST00000360642 IPO8O15397 1037 aaKnown RBP9.18□□□□□ -0.94
CLCN3-202ENST00000360642 ZNF853P0CG23 659 aa9.18□□□□□ -0.94
CLCN3-202ENST00000360642 FBXO33Q7Z6M2 555 aa9.18□□□□□ -0.94
CLCN3-202ENST00000360642 FOXJ1Q92949 421 aa9.18□□□□□ -0.94
CLCN3-202ENST00000360642 SAP130Q9H0E3 1048 aa9.18□□□□□ -0.94
CLCN3-202ENST00000360642 HPS5Q9UPZ3 1129 aa9.18□□□□□ -0.94
CLCN3-202ENST00000360642 ITPRIPQ8IWB1 547 aa9.18□□□□□ -0.94
CLCN3-202ENST00000360642 SMC5Q8IY18 1101 aa9.18□□□□□ -0.94
CLCN3-202ENST00000360642 MRPL50Q8N5N7 158 aaKnown RBP9.18□□□□□ -0.94
CLCN3-202ENST00000360642 TNRQ92752 1358 aa9.18□□□□□ -0.94
CLCN3-202ENST00000360642 TMEM2Q9UHN6 1383 aa9.18□□□□□ -0.94
CLCN3-202ENST00000360642 HMOX1P09601 288 aa9.17□□□□□ -0.94
CLCN3-202ENST00000360642 NFATC2IPQ8NCF5 419 aa9.17□□□□□ -0.94
CLCN3-202ENST00000360642 WBP1LQ9NX94 342 aa9.17□□□□□ -0.94
CLCN3-202ENST00000360642 WWC3Q9ULE0 1092 aa9.17□□□□□ -0.94
CLCN3-202ENST00000360642 PRR36Q9H6K5 1346 aa9.17□□□□□ -0.94
CLCN3-202ENST00000360642 VAMP4O75379 141 aa9.17□□□□□ -0.94
CLCN3-202ENST00000360642 SEC13P55735 322 aa9.17□□□□□ -0.94
CLCN3-202ENST00000360642 DNAJC2Q99543 621 aaKnown RBP9.17□□□□□ -0.94
CLCN3-202ENST00000360642 ADAMTS13Q76LX8 1427 aa9.17□□□□□ -0.94
CLCN3-202ENST00000360642 CALD1Q05682 793 aaKnown RBP9.16□□□□□ -0.94
CLCN3-202ENST00000360642 PTPRNQ16849 979 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 DZIP3Q86Y13 1208 aaKnown RBP9.16□□□□□ -0.94
CLCN3-202ENST00000360642 TBC1D32Q96NH3 1257 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 UNC93B1Q9H1C4 597 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 IFT57Q9NWB7 429 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 PIK3R4Q99570 1358 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 ROBO2Q9HCK4 1378 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 ICMTO60725 284 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 ARHGAP45Q92619 1136 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 COG3Q96JB2 828 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 ESF1Q9H501 851 aaKnown RBP9.16□□□□□ -0.94
CLCN3-202ENST00000360642 NOD1Q9Y239 953 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 ITSN1Q15811 1721 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 JUNDP17535 347 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 MAPK8P45983 427 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 EVA1BQ9NVM1 165 aa9.16□□□□□ -0.94
CLCN3-202ENST00000360642 NRKQ7Z2Y5 1582 aa9.15□□□□□ -0.94
CLCN3-202ENST00000360642 P4HBP07237 508 aaKnown RBP9.15□□□□□ -0.94
CLCN3-202ENST00000360642 CDK11BP21127 795 aaKnown RBP9.15□□□□□ -0.94
CLCN3-202ENST00000360642 GNAI1P63096 354 aa9.15□□□□□ -0.94
CLCN3-202ENST00000360642 Q3C1V9 767 aa9.15□□□□□ -0.94
CLCN3-202ENST00000360642 NAALADL2Q58DX5 795 aa9.15□□□□□ -0.94
CLCN3-202ENST00000360642 ATCAYQ86WG3 371 aa9.15□□□□□ -0.94
CLCN3-202ENST00000360642 PTCH1Q13635 1447 aa9.15□□□□□ -0.94
CLCN3-202ENST00000360642 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.15□□□□□ -0.94
CLCN3-202ENST00000360642 FMNL1O95466 1100 aaPredicted RBP9.15□□□□□ -0.94
CLCN3-202ENST00000360642 PCDHB11Q9Y5F2 797 aa9.15□□□□□ -0.94
CLCN3-202ENST00000360642 PCDHGA11Q9Y5H2 935 aa9.15□□□□□ -0.94
CLCN3-202ENST00000360642 DLG5Q8TDM6 1919 aa9.15□□□□□ -0.95
CLCN3-202ENST00000360642 TOPAZ1Q8N9V7 1692 aa9.15□□□□□ -0.95
CLCN3-202ENST00000360642 MPSTP25325 297 aa9.14□□□□□ -0.95
CLCN3-202ENST00000360642 RRS1Q15050 365 aaKnown RBP9.14□□□□□ -0.95
CLCN3-202ENST00000360642 SWI5Q1ZZU3 235 aa9.14□□□□□ -0.95
CLCN3-202ENST00000360642 SPSB2Q99619 263 aa9.14□□□□□ -0.95
CLCN3-202ENST00000360642 THUMPD2Q9BTF0 503 aaKnown RBP9.14□□□□□ -0.95
CLCN3-202ENST00000360642 SCUBE2Q9NQ36 999 aa9.14□□□□□ -0.95
CLCN3-202ENST00000360642 MBIPQ9NS73 344 aa9.14□□□□□ -0.95
CLCN3-202ENST00000360642 TNNI2P48788 182 aa9.14□□□□□ -0.95
CLCN3-202ENST00000360642 PTK2Q05397 1052 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms