RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 SH2B1Q9NRF2 756 aaPredicted RBP17.63■□□□□ 0.41
UBAP1-202ENST00000359544 ANO6Q4KMQ2 910 aa17.63■□□□□ 0.41
UBAP1-202ENST00000359544 SLC4A10Q6U841 1118 aa17.63■□□□□ 0.41
UBAP1-202ENST00000359544 TNMDQ9H2S6 317 aa17.63■□□□□ 0.41
UBAP1-202ENST00000359544 CLIP2Q9UDT6 1046 aa17.63■□□□□ 0.41
UBAP1-202ENST00000359544 BRWD3Q6RI45 1802 aa17.62■□□□□ 0.41
UBAP1-202ENST00000359544 ZNF592Q92610 1267 aa17.62■□□□□ 0.41
UBAP1-202ENST00000359544 DDX19AQ9NUU7 478 aaKnown RBP17.62■□□□□ 0.41
UBAP1-202ENST00000359544 NRBP1Q9UHY1 535 aa17.62■□□□□ 0.41
UBAP1-202ENST00000359544 CAVIN2O95810 425 aa17.62■□□□□ 0.41
UBAP1-202ENST00000359544 GNAI3P08754 354 aa17.62■□□□□ 0.41
UBAP1-202ENST00000359544 KRT27Q7Z3Y8 459 aa17.62■□□□□ 0.41
UBAP1-202ENST00000359544 VGLL3A8MV65 326 aa17.61■□□□□ 0.41
UBAP1-202ENST00000359544 SGSM2O43147 1006 aa17.61■□□□□ 0.41
UBAP1-202ENST00000359544 TULP2O00295 520 aa17.61■□□□□ 0.41
UBAP1-202ENST00000359544 ATP8B2P98198 1209 aa17.61■□□□□ 0.41
UBAP1-202ENST00000359544 PTPN14Q15678 1187 aa17.61■□□□□ 0.41
UBAP1-202ENST00000359544 NBPF6Q5VWK0 638 aa17.61■□□□□ 0.41
UBAP1-202ENST00000359544 CACTINQ8WUQ7 758 aaKnown RBP17.61■□□□□ 0.41
UBAP1-202ENST00000359544 NBPF4Q96M43 638 aa17.61■□□□□ 0.41
UBAP1-202ENST00000359544 VPS37CA5D8V6 355 aaPredicted RBP17.6■□□□□ 0.41
UBAP1-202ENST00000359544 CARD10Q9BWT7 1032 aa17.6■□□□□ 0.41
UBAP1-202ENST00000359544 ZNF215Q9UL58 517 aaPredicted RBP17.6■□□□□ 0.41
UBAP1-202ENST00000359544 RBM43Q6ZSC3 357 aaKnown RBP17.6■□□□□ 0.41
UBAP1-202ENST00000359544 CCDC83Q8IWF9 413 aa17.6■□□□□ 0.41
UBAP1-202ENST00000359544 IL25Q9H293 177 aa17.6■□□□□ 0.41
UBAP1-202ENST00000359544 CAMK4Q16566 473 aa17.59■□□□□ 0.41
UBAP1-202ENST00000359544 FBXO38Q6PIJ6 1188 aa17.59■□□□□ 0.41
UBAP1-202ENST00000359544 UPF1Q92900 1129 aaKnown RBP eCLIP17.59■□□□□ 0.413e-7■■■■■ 30.2
UBAP1-202ENST00000359544 LSG1Q9H089 658 aaKnown RBP17.59■□□□□ 0.41
UBAP1-202ENST00000359544 HYPKQ9NX55 129 aa17.59■□□□□ 0.41
UBAP1-202ENST00000359544 KIF2AO00139 706 aaPredicted RBP17.59■□□□□ 0.41
UBAP1-202ENST00000359544 VPS53Q5VIR6 699 aa17.59■□□□□ 0.41
UBAP1-202ENST00000359544 BARGINQ6ZT62 677 aa17.59■□□□□ 0.41
UBAP1-202ENST00000359544 NYAP1Q6ZVC0 841 aa17.59■□□□□ 0.41
UBAP1-202ENST00000359544 TTC6Q86TZ1 520 aa17.59■□□□□ 0.41
UBAP1-202ENST00000359544 GOLGA6L4A6NEF3 574 aa17.58■□□□□ 0.41
UBAP1-202ENST00000359544 LIG1P18858 919 aa17.58■□□□□ 0.41
UBAP1-202ENST00000359544 BMS1Q14692 1282 aaKnown RBP17.58■□□□□ 0.41
UBAP1-202ENST00000359544 KIF1BPQ96EK5 621 aa17.58■□□□□ 0.41
UBAP1-202ENST00000359544 FLT4P35916 1363 aa17.58■□□□□ 0.41
UBAP1-202ENST00000359544 RGPD2P0DJD1 1756 aa17.58■□□□□ 0.4
UBAP1-202ENST00000359544 ERICH4A6NGS2 130 aa17.58■□□□□ 0.4
UBAP1-202ENST00000359544 SLU7O95391 586 aaKnown RBP17.58■□□□□ 0.4
UBAP1-202ENST00000359544 CASTP20810 708 aaKnown RBP17.58■□□□□ 0.4
UBAP1-202ENST00000359544 LRRC8AQ8IWT6 810 aa17.58■□□□□ 0.4
UBAP1-202ENST00000359544 BCL11BQ9C0K0 894 aaPredicted RBP17.58■□□□□ 0.4
UBAP1-202ENST00000359544 SCAND2PQ9GZW5 306 aaPredicted RBP17.58■□□□□ 0.4
UBAP1-202ENST00000359544 CLSTN2Q9H4D0 955 aa17.58■□□□□ 0.4
UBAP1-202ENST00000359544 HTATSF1O43719 755 aaKnown RBP17.57■□□□□ 0.4
UBAP1-202ENST00000359544 ZNF165P49910 485 aa17.57■□□□□ 0.4
UBAP1-202ENST00000359544 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
UBAP1-202ENST00000359544 NOL10Q9BSC4 688 aaKnown RBP17.57■□□□□ 0.4
UBAP1-202ENST00000359544 F6X3S4 739 aa17.57■□□□□ 0.4
UBAP1-202ENST00000359544 LARGE1O95461 756 aa17.57■□□□□ 0.4
UBAP1-202ENST00000359544 ELF2Q15723 593 aa17.57■□□□□ 0.4
UBAP1-202ENST00000359544 RASEFQ8IZ41 740 aa17.57■□□□□ 0.4
UBAP1-202ENST00000359544 PDRG1Q9NUG6 133 aa17.57■□□□□ 0.4
UBAP1-202ENST00000359544 DACT1Q9NYF0 836 aa17.57■□□□□ 0.4
UBAP1-202ENST00000359544 PNMA6EA0A0J9YXQ4 647 aa17.56■□□□□ 0.4
UBAP1-202ENST00000359544 PDCP20941 246 aa17.56■□□□□ 0.4
UBAP1-202ENST00000359544 SARM1Q6SZW1 724 aa17.56■□□□□ 0.4
UBAP1-202ENST00000359544 CNTROBQ8N137 903 aa17.56■□□□□ 0.4
UBAP1-202ENST00000359544 LARP6Q9BRS8 491 aaKnown RBP17.56■□□□□ 0.4
UBAP1-202ENST00000359544 THSD7AQ9UPZ6 1657 aa17.56■□□□□ 0.4
UBAP1-202ENST00000359544 CYP2C19P33261 490 aa17.56■□□□□ 0.4
UBAP1-202ENST00000359544 CCDC144BQ3MJ40 725 aa17.56■□□□□ 0.4
UBAP1-202ENST00000359544 CCDC144CPQ8IYA2 1237 aa17.56■□□□□ 0.4
UBAP1-202ENST00000359544 MRFAP1L1Q96HT8 127 aa17.56■□□□□ 0.4
UBAP1-202ENST00000359544 THRAP3Q9Y2W1 955 aaKnown RBP17.56■□□□□ 0.4
UBAP1-202ENST00000359544 DDB1Q16531 1140 aa17.55■□□□□ 0.4
UBAP1-202ENST00000359544 TM6SF1Q9BZW5 370 aa17.55■□□□□ 0.4
UBAP1-202ENST00000359544 CHMP3Q9Y3E7 222 aa17.55■□□□□ 0.4
UBAP1-202ENST00000359544 RAB11FIP3O75154 756 aa17.55■□□□□ 0.4
UBAP1-202ENST00000359544 EIF4A2Q14240 407 aaKnown RBP17.55■□□□□ 0.4
UBAP1-202ENST00000359544 KCND1Q9NSA2 647 aa17.55■□□□□ 0.4
UBAP1-202ENST00000359544 GOLGA6L19H0YKK7 550 aa17.54■□□□□ 0.4
UBAP1-202ENST00000359544 LARP1BQ659C4 914 aaKnown RBP17.54■□□□□ 0.4
UBAP1-202ENST00000359544 G2E3Q7L622 706 aa17.54■□□□□ 0.4
UBAP1-202ENST00000359544 CYP46A1Q9Y6A2 500 aa17.54■□□□□ 0.4
UBAP1-202ENST00000359544 MCM10Q7L590 875 aa17.54■□□□□ 0.4
UBAP1-202ENST00000359544 SOS1Q07889 1333 aaPredicted RBP17.54■□□□□ 0.4
UBAP1-202ENST00000359544 SKILP12757 684 aa17.53■□□□□ 0.4
UBAP1-202ENST00000359544 SPATA32Q96LK8 384 aa17.53■□□□□ 0.4
UBAP1-202ENST00000359544 EYA1Q99502 592 aa17.53■□□□□ 0.4
UBAP1-202ENST00000359544 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.53■□□□□ 0.4
UBAP1-202ENST00000359544 V9GYY5 206 aaPredicted RBP17.53■□□□□ 0.4
UBAP1-202ENST00000359544 IL2RBP14784 551 aa17.53■□□□□ 0.4
UBAP1-202ENST00000359544 PTF1AQ7RTS3 328 aa17.53■□□□□ 0.4
UBAP1-202ENST00000359544 MARCH10Q8NA82 808 aaPredicted RBP17.53■□□□□ 0.4
UBAP1-202ENST00000359544 RUFY2Q8WXA3 655 aa17.53■□□□□ 0.4
UBAP1-202ENST00000359544 STK31Q9BXU1 1019 aa17.53■□□□□ 0.4
UBAP1-202ENST00000359544 DNAJC25Q9H1X3 360 aa17.53■□□□□ 0.4
UBAP1-202ENST00000359544 ABCC6O95255 1503 aa17.52■□□□□ 0.4
UBAP1-202ENST00000359544 JAKMIP1Q96N16 626 aaKnown RBP17.52■□□□□ 0.4
UBAP1-202ENST00000359544 ZSWIM6Q9HCJ5 1215 aa17.52■□□□□ 0.4
UBAP1-202ENST00000359544 SRCAPQ6ZRS2 3230 aa17.52■□□□□ 0.4
UBAP1-202ENST00000359544 USP27XA6NNY8 438 aa17.52■□□□□ 0.39
UBAP1-202ENST00000359544 H2AFXP16104 143 aaPredicted RBP17.52■□□□□ 0.39
UBAP1-202ENST00000359544 CAPN2P17655 700 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms