RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 SHANK2Q9UPX8 1470 aa13.22□□□□□ -0.29
SEPSECS-201ENST00000358971 IFIT2P09913 472 aaKnown RBP13.22□□□□□ -0.29
SEPSECS-201ENST00000358971 TRIM65Q6PJ69 517 aa13.22□□□□□ -0.29
SEPSECS-201ENST00000358971 THUMPD2Q9BTF0 503 aaKnown RBP13.22□□□□□ -0.29
SEPSECS-201ENST00000358971 FAM204AQ9H8W3 233 aa13.22□□□□□ -0.29
SEPSECS-201ENST00000358971 TOPBP1Q92547 1522 aa13.22□□□□□ -0.29
SEPSECS-201ENST00000358971 EXOC5O00471 708 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 NF2P35240 595 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 SCRN1Q12765 414 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 VPS53Q5VIR6 699 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 WWC2Q6AWC2 1192 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 CDC37L1Q7L3B6 337 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 CTCFLQ8NI51 663 aaPredicted RBP13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 ACBD3Q9H3P7 528 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 FAM135BQ49AJ0 1406 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 TXLNAP40222 546 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 GNG11P61952 73 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 DDX11Q96FC9 970 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 OSBPL3Q9H4L5 887 aa13.21□□□□□ -0.29
SEPSECS-201ENST00000358971 ADGRB2O60241 1585 aa13.21□□□□□ -0.3
SEPSECS-201ENST00000358971 GNAI1P63096 354 aa13.21□□□□□ -0.3
SEPSECS-201ENST00000358971 LEO1Q8WVC0 666 aaPredicted RBP13.21□□□□□ -0.3
SEPSECS-201ENST00000358971 FAXDC2Q96IV6 333 aa13.21□□□□□ -0.3
SEPSECS-201ENST00000358971 FANCGO15287 622 aa13.2□□□□□ -0.3
SEPSECS-201ENST00000358971 KRT24Q2M2I5 525 aa13.2□□□□□ -0.3
SEPSECS-201ENST00000358971 TWISTNBQ3B726 338 aaPredicted RBP13.2□□□□□ -0.3
SEPSECS-201ENST00000358971 CFAP70Q5T0N1 1121 aa13.2□□□□□ -0.3
SEPSECS-201ENST00000358971 NECAB1Q8N987 351 aa13.2□□□□□ -0.3
SEPSECS-201ENST00000358971 TTC14Q96N46 770 aa13.2□□□□□ -0.3
SEPSECS-201ENST00000358971 SNX14Q9Y5W7 946 aa13.2□□□□□ -0.3
SEPSECS-201ENST00000358971 HMMRO75330 724 aa13.2□□□□□ -0.3
SEPSECS-201ENST00000358971 RSRC2Q7L4I2 434 aaKnown RBP13.2□□□□□ -0.3
SEPSECS-201ENST00000358971 SUGCTQ9HAC7 445 aa13.2□□□□□ -0.3
SEPSECS-201ENST00000358971 EBAG9O00559 213 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 C21orf2O43822 256 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 ERLIN1O75477 346 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 TICAM2Q86XR7 235 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 CEP57L1Q8IYX8 460 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 TACO1Q9BSH4 297 aaKnown RBP13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 XPO4Q9C0E2 1151 aaKnown RBP13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 IFNKQ9P0W0 207 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 IQGAP2Q13576 1575 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 INPP5BP32019 993 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 CCT5P48643 541 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 DHX40Q8IX18 779 aaKnown RBP13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 FAM71BQ8TC56 605 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 UTP14AQ9BVJ6 771 aaKnown RBP13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 FAM169AQ9Y6X4 670 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 FMNL3Q8IVF7 1028 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 MPHOSPH8Q99549 860 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 ANO10Q9NW15 660 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 SSH2Q76I76 1423 aa13.19□□□□□ -0.3
SEPSECS-201ENST00000358971 KCNJ6P48051 423 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 C11orf91Q3C1V1 193 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 BEND6Q5SZJ8 279 aaPredicted RBP13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 RASEFQ8IZ41 740 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 STAG1Q8WVM7 1258 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 IL25Q9H293 177 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 TRAK1Q9UPV9 953 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 TRAPPC8Q9Y2L5 1435 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 TTC21AQ8NDW8 1320 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 KLHL33A6NCF5 533 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 SGSM2O43147 1006 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 MAP3K9P80192 1104 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 PGBD1Q96JS3 809 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 CLIC6Q96NY7 704 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 IRX1P78414 480 aaPredicted RBP13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 CABS1Q96KC9 395 aa13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 NAT10Q9H0A0 1025 aaKnown RBP13.18□□□□□ -0.3
SEPSECS-201ENST00000358971 PDS5BQ9NTI5 1447 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 MSH6P52701 1360 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 GPTP24298 496 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 AFAP1L1Q8TED9 768 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 MEIS3Q99687 375 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 TRIM6Q9C030 488 aaPredicted RBP13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 ABCB6Q9NP58 842 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 CAPN7Q9Y6W3 813 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 EVC2Q86UK5 1308 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 CEBPZQ03701 1054 aaKnown RBP13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 UNC5CLQ8IV45 518 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 WDR24Q96S15 920 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 ODF2LQ9ULJ1 636 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 MRFAP1Q9Y605 127 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 MADDQ8WXG6 1647 aa13.17□□□□□ -0.3
SEPSECS-201ENST00000358971 ATP10DQ9P241 1426 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 ZSCAN12O43309 604 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 ERCC3P19447 782 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 OS9Q13438 667 aaPredicted RBP13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 NBPF9Q3BBW0 867 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 POTEDQ86YR6 584 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 DDX54Q8TDD1 881 aaKnown RBP13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 ERCC4Q92889 916 aaPredicted RBP13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 CD248Q9HCU0 757 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 HYPKQ9NX55 129 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 KNDC1Q76NI1 1749 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms