RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 LINC00116Q8NCU8 138 aa15.36■□□□□ 0.05
GGPS1-202ENST00000358966 FPGT-TNNI3KV9GXZ4 949 aa15.36■□□□□ 0.05
GGPS1-202ENST00000358966 IL6STP40189 918 aaPredicted RBP15.35■□□□□ 0.05
GGPS1-202ENST00000358966 EIF5P55010 431 aaKnown RBP15.35■□□□□ 0.05
GGPS1-202ENST00000358966 HSCBQ8IWL3 235 aa15.35■□□□□ 0.05
GGPS1-202ENST00000358966 TRMT112Q9UI30 125 aaKnown RBP15.35■□□□□ 0.05
GGPS1-202ENST00000358966 AOX1Q06278 1338 aa15.35■□□□□ 0.05
GGPS1-202ENST00000358966 SPATA31A6Q5VVP1 1343 aa15.35■□□□□ 0.05
GGPS1-202ENST00000358966 CNTROBQ8N137 903 aa15.35■□□□□ 0.05
GGPS1-202ENST00000358966 NEUROD6Q96NK8 337 aa15.35■□□□□ 0.05
GGPS1-202ENST00000358966 REC8O95072 547 aa15.34■□□□□ 0.05
GGPS1-202ENST00000358966 ZBTB38Q8NAP3 1195 aaPredicted RBP15.34■□□□□ 0.05
GGPS1-202ENST00000358966 GREM2Q9H772 168 aa15.34■□□□□ 0.05
GGPS1-202ENST00000358966 TTC41PQ6P2S7 1318 aa15.34■□□□□ 0.05
GGPS1-202ENST00000358966 USP42Q9H9J4 1324 aaKnown RBP15.34■□□□□ 0.05
GGPS1-202ENST00000358966 HCLS1P14317 486 aaPredicted RBP15.34■□□□□ 0.05
GGPS1-202ENST00000358966 AMIGO3Q86WK7 504 aa15.34■□□□□ 0.05
GGPS1-202ENST00000358966 SLFNL1Q499Z3 407 aa15.33■□□□□ 0.05
GGPS1-202ENST00000358966 GJD4Q96KN9 370 aaPredicted RBP15.33■□□□□ 0.05
GGPS1-202ENST00000358966 FAM227BQ96M60 508 aa15.33■□□□□ 0.05
GGPS1-202ENST00000358966 PCCAP05165 728 aaPredicted RBP15.33■□□□□ 0.04
GGPS1-202ENST00000358966 NOL8Q76FK4 1167 aaKnown RBP15.33■□□□□ 0.04
GGPS1-202ENST00000358966 DNAJC2Q99543 621 aaKnown RBP15.33■□□□□ 0.04
GGPS1-202ENST00000358966 ANTXR1Q9H6X2 564 aa15.33■□□□□ 0.04
GGPS1-202ENST00000358966 COL15A1P39059 1388 aa15.32■□□□□ 0.04
GGPS1-202ENST00000358966 IRS4O14654 1257 aaPredicted RBP15.32■□□□□ 0.04
GGPS1-202ENST00000358966 GPATCH3Q96I76 525 aa15.32■□□□□ 0.04
GGPS1-202ENST00000358966 CCDC57Q2TAC2 916 aa15.32■□□□□ 0.04
GGPS1-202ENST00000358966 SUSD4Q5VX71 490 aa15.32■□□□□ 0.04
GGPS1-202ENST00000358966 TRIM28Q13263 835 aaKnown RBP15.31■□□□□ 0.04
GGPS1-202ENST00000358966 BICDL1Q6ZP65 573 aa15.31■□□□□ 0.04
GGPS1-202ENST00000358966 CAMTA2O94983 1202 aa15.31■□□□□ 0.04
GGPS1-202ENST00000358966 DIAPH3Q9NSV4 1193 aa15.31■□□□□ 0.04
GGPS1-202ENST00000358966 EYA2O00167 538 aa15.3■□□□□ 0.04
GGPS1-202ENST00000358966 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
GGPS1-202ENST00000358966 UPF3BQ9BZI7 483 aaKnown RBP15.3■□□□□ 0.04
GGPS1-202ENST00000358966 SGSM2O43147 1006 aa15.3■□□□□ 0.04
GGPS1-202ENST00000358966 ITGA6P23229 1130 aa15.3■□□□□ 0.04
GGPS1-202ENST00000358966 TTLL11Q8NHH1 800 aa15.3■□□□□ 0.04
GGPS1-202ENST00000358966 FSD1Q9BTV5 496 aa15.3■□□□□ 0.04
GGPS1-202ENST00000358966 ANKRD36CQ5JPF3 1778 aa15.3■□□□□ 0.04
GGPS1-202ENST00000358966 A0A0D9SFI3 127 aa15.3■□□□□ 0.04
GGPS1-202ENST00000358966 SNAP23O00161 211 aa15.3■□□□□ 0.04
GGPS1-202ENST00000358966 ADORA1P30542 326 aa15.3■□□□□ 0.04
GGPS1-202ENST00000358966 PTH1RQ03431 593 aa15.3■□□□□ 0.04
GGPS1-202ENST00000358966 SEPT12Q8IYM1 358 aa15.3■□□□□ 0.04
GGPS1-202ENST00000358966 NIP7Q9Y221 180 aaKnown RBP eCLIP15.3■□□□□ 0.04
GGPS1-202ENST00000358966 ZNF34Q8IZ26 560 aa15.29■□□□□ 0.04
GGPS1-202ENST00000358966 CCDC24Q8N4L8 307 aa15.29■□□□□ 0.04
GGPS1-202ENST00000358966 BTAF1O14981 1849 aa15.29■□□□□ 0.04
GGPS1-202ENST00000358966 A0A1B0GUL7 405 aa15.29■□□□□ 0.04
GGPS1-202ENST00000358966 CTSWP56202 376 aa15.29■□□□□ 0.04
GGPS1-202ENST00000358966 NMIQ13287 307 aaPredicted RBP15.29■□□□□ 0.04
GGPS1-202ENST00000358966 IFIT5Q13325 482 aaKnown RBP15.29■□□□□ 0.04
GGPS1-202ENST00000358966 SRP68Q9UHB9 627 aaKnown RBP15.29■□□□□ 0.04
GGPS1-202ENST00000358966 HELBQ8NG08 1087 aaPredicted RBP15.28■□□□□ 0.04
GGPS1-202ENST00000358966 COL9A3Q14050 684 aaPredicted RBP15.28■□□□□ 0.04
GGPS1-202ENST00000358966 HSP90AB3PQ58FF7 597 aa15.28■□□□□ 0.04
GGPS1-202ENST00000358966 SNX21Q969T3 373 aa15.28■□□□□ 0.04
GGPS1-202ENST00000358966 EVI5LQ96CN4 794 aa15.28■□□□□ 0.04
GGPS1-202ENST00000358966 SEC62Q99442 399 aaKnown RBP15.28■□□□□ 0.04
GGPS1-202ENST00000358966 LARP6Q9BRS8 491 aaKnown RBP15.28■□□□□ 0.04
GGPS1-202ENST00000358966 SEC31BQ9NQW1 1179 aa15.28■□□□□ 0.04
GGPS1-202ENST00000358966 THSD7AQ9UPZ6 1657 aa15.28■□□□□ 0.04
GGPS1-202ENST00000358966 ERVV-1B6SEH8 477 aa15.27■□□□□ 0.04
GGPS1-202ENST00000358966 K7ELQ4 463 aaPredicted RBP15.27■□□□□ 0.04
GGPS1-202ENST00000358966 DTNBO60941 627 aa15.27■□□□□ 0.04
GGPS1-202ENST00000358966 IL15P40933 162 aaPredicted RBP15.27■□□□□ 0.04
GGPS1-202ENST00000358966 PI16Q6UXB8 463 aa15.27■□□□□ 0.04
GGPS1-202ENST00000358966 ZNF589Q86UQ0 364 aaPredicted RBP15.27■□□□□ 0.04
GGPS1-202ENST00000358966 RASEFQ8IZ41 740 aa15.27■□□□□ 0.04
GGPS1-202ENST00000358966 SMARCC1Q92922 1105 aaPredicted RBP15.27■□□□□ 0.04
GGPS1-202ENST00000358966 LSG1Q9H089 658 aaKnown RBP15.27■□□□□ 0.04
GGPS1-202ENST00000358966 SNRKQ9NRH2 765 aa15.27■□□□□ 0.04
GGPS1-202ENST00000358966 CSF1RP07333 972 aa15.27■□□□□ 0.03
GGPS1-202ENST00000358966 CPA1P15085 419 aa15.27■□□□□ 0.03
GGPS1-202ENST00000358966 NEK4P51957 841 aa15.27■□□□□ 0.03
GGPS1-202ENST00000358966 RABEP1Q15276 862 aa15.27■□□□□ 0.03
GGPS1-202ENST00000358966 QTRT2Q9H974 415 aaKnown RBP15.27■□□□□ 0.03
GGPS1-202ENST00000358966 GNPATO15228 680 aa15.26■□□□□ 0.03
GGPS1-202ENST00000358966 PHF14O94880 888 aa15.26■□□□□ 0.03
GGPS1-202ENST00000358966 LDHAL6AQ6ZMR3 332 aa15.26■□□□□ 0.03
GGPS1-202ENST00000358966 CCDC129Q6ZRS4 1044 aa15.26■□□□□ 0.03
GGPS1-202ENST00000358966 CCNL1Q9UK58 526 aaPredicted RBP15.26■□□□□ 0.03
GGPS1-202ENST00000358966 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
GGPS1-202ENST00000358966 GOLIM4O00461 696 aa15.26■□□□□ 0.03
GGPS1-202ENST00000358966 L1TD1Q5T7N2 865 aaKnown RBP15.26■□□□□ 0.03
GGPS1-202ENST00000358966 MYH3P11055 1940 aa15.25■□□□□ 0.03
GGPS1-202ENST00000358966 ZNF609O15014 1411 aa15.25■□□□□ 0.03
GGPS1-202ENST00000358966 COL4A1P02462 1669 aa15.25■□□□□ 0.03
GGPS1-202ENST00000358966 RAD50Q92878 1312 aa15.25■□□□□ 0.03
GGPS1-202ENST00000358966 ATP5JP18859 108 aa15.25■□□□□ 0.03
GGPS1-202ENST00000358966 SCARF1Q14162 830 aa15.25■□□□□ 0.03
GGPS1-202ENST00000358966 C3orf67Q6ZVT6 689 aa15.25■□□□□ 0.03
GGPS1-202ENST00000358966 PLA2G12BQ9BX93 195 aa15.25■□□□□ 0.03
GGPS1-202ENST00000358966 CEP126Q9P2H0 1117 aa15.25■□□□□ 0.03
GGPS1-202ENST00000358966 CDHR2Q9BYE9 1310 aa15.24■□□□□ 0.03
GGPS1-202ENST00000358966 IPO4Q8TEX9 1081 aaKnown RBP15.24■□□□□ 0.03
GGPS1-202ENST00000358966 CNNM1Q9NRU3 951 aa15.24■□□□□ 0.03
GGPS1-202ENST00000358966 ZHX1Q9UKY1 873 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms