RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SPAG1Q07617 926 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 PAIP2Q9BPZ3 127 aaKnown RBP10□□□□□ -0.81
COL6A6-201ENST00000358511 SSRP1Q08945 709 aaKnown RBP10□□□□□ -0.81
COL6A6-201ENST00000358511 ZSCAN26Q16670 478 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 STIM2Q9P246 746 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 PARD3Q8TEW0 1356 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 LARP1Q6PKG0 1096 aaKnown RBP10□□□□□ -0.81
COL6A6-201ENST00000358511 PLVAPQ9BX97 442 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 RHOXF2BP0C7M4 288 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 CTNNBL1Q8WYA6 563 aaPredicted RBP10□□□□□ -0.81
COL6A6-201ENST00000358511 RHOXF2Q9BQY4 288 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 SEC63Q9UGP8 760 aaKnown RBP10□□□□□ -0.81
COL6A6-201ENST00000358511 PCDHB15Q9Y5E8 787 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 GOLGA6CA6NDK9 693 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 TACC1O75410 805 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 GOLGA6DP0CG33 693 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 PRPF4BQ13523 1007 aaKnown RBP10□□□□□ -0.81
COL6A6-201ENST00000358511 BCL2L12Q9HB09 334 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 GOLGA6AQ9NYA3 693 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 NDUFAB1O14561 156 aa9.99□□□□□ -0.81
COL6A6-201ENST00000358511 ZFYP08048 801 aaPredicted RBP9.99□□□□□ -0.81
COL6A6-201ENST00000358511 IKBKGQ9Y6K9 419 aa9.99□□□□□ -0.81
COL6A6-201ENST00000358511 ELP1O95163 1332 aa9.99□□□□□ -0.81
COL6A6-201ENST00000358511 SCAF11Q99590 1463 aaKnown RBP9.99□□□□□ -0.81
COL6A6-201ENST00000358511 NOP2P46087 812 aaKnown RBP9.99□□□□□ -0.81
COL6A6-201ENST00000358511 NEBLO76041 1014 aa9.99□□□□□ -0.81
COL6A6-201ENST00000358511 CCT2P78371 535 aaKnown RBP9.99□□□□□ -0.81
COL6A6-201ENST00000358511 ZNF526Q8TF50 670 aaPredicted RBP9.99□□□□□ -0.81
COL6A6-201ENST00000358511 AMPD3Q01432 767 aa9.99□□□□□ -0.81
COL6A6-201ENST00000358511 PRAM1Q96QH2 718 aa9.99□□□□□ -0.81
COL6A6-201ENST00000358511 AKR1B10O60218 316 aa9.99□□□□□ -0.81
COL6A6-201ENST00000358511 LRCH2Q5VUJ6 765 aa9.99□□□□□ -0.81
COL6A6-201ENST00000358511 KIF5AQ12840 1032 aa9.99□□□□□ -0.81
COL6A6-201ENST00000358511 CNGA4Q8IV77 575 aa9.99□□□□□ -0.81
COL6A6-201ENST00000358511 LMNTD2Q8IXW0 634 aa9.99□□□□□ -0.81
COL6A6-201ENST00000358511 LMOD1P29536 600 aaPredicted RBP9.98□□□□□ -0.81
COL6A6-201ENST00000358511 ISM2Q6H9L7 571 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 MACROD2A1Z1Q3 448 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 ATP6V1AP38606 617 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 A0A087WZG4 1122 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 LARP6Q9BRS8 491 aaKnown RBP9.98□□□□□ -0.81
COL6A6-201ENST00000358511 IMPACTQ9P2X3 320 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 NLRP6P59044 892 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 BOLA2Q9H3K6 86 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 TMEM266Q2M3C6 531 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 SYTL4Q96C24 671 aaPredicted RBP9.98□□□□□ -0.81
COL6A6-201ENST00000358511 POLR3DP05423 398 aaPredicted RBP9.98□□□□□ -0.81
COL6A6-201ENST00000358511 OAS2P29728 719 aaKnown RBP9.98□□□□□ -0.81
COL6A6-201ENST00000358511 GBP1P32455 592 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 DDX54Q8TDD1 881 aaKnown RBP9.98□□□□□ -0.81
COL6A6-201ENST00000358511 ARHGAP45Q92619 1136 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 LZTFL1Q9NQ48 299 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 ZMYM3Q14202 1370 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 ESYT1Q9BSJ8 1104 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 CEP126Q9P2H0 1117 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 ANKRD36BQ8N2N9 1353 aa9.98□□□□□ -0.81
COL6A6-201ENST00000358511 BANK1Q8NDB2 785 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 BTBD11A6QL63 1104 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 PRPHP41219 470 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 TSNAXIP1Q2TAA8 658 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 BAG1Q99933 345 aaPredicted RBP9.97□□□□□ -0.81
COL6A6-201ENST00000358511 IFNKQ9P0W0 207 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 SETDB1Q15047 1291 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 SMC6Q96SB8 1091 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 AKAP2Q9Y2D5 859 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 CAPZA3Q96KX2 299 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 NAP1L3Q99457 506 aaPredicted RBP9.97□□□□□ -0.81
COL6A6-201ENST00000358511 CDK19Q9BWU1 502 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 CETN1Q12798 172 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 TRIM47Q96LD4 638 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 ECHDC1Q9NTX5 307 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 PUF60Q9UHX1 559 aaKnown RBP9.97□□□□□ -0.81
COL6A6-201ENST00000358511 GNAT3A8MTJ3 354 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 CCDC172P0C7W6 258 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 ABTB2Q8N961 1025 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 ZNF692Q9BU19 519 aaPredicted RBP9.97□□□□□ -0.81
COL6A6-201ENST00000358511 DDX23Q9BUQ8 820 aaKnown RBP9.97□□□□□ -0.81
COL6A6-201ENST00000358511 NAPBQ9H115 298 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 KIF3CO14782 793 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 MYO1BO43795 1136 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 BMP15O95972 392 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 ATL3Q6DD88 541 aa9.97□□□□□ -0.81
COL6A6-201ENST00000358511 LUC7L2Q9Y383 392 aaKnown RBP9.97□□□□□ -0.81
COL6A6-201ENST00000358511 SREK1Q8WXA9 508 aaKnown RBP9.96□□□□□ -0.81
COL6A6-201ENST00000358511 NEK1Q96PY6 1258 aa9.96□□□□□ -0.81
COL6A6-201ENST00000358511 GOLGA5Q8TBA6 731 aa9.96□□□□□ -0.81
COL6A6-201ENST00000358511 PCK1P35558 622 aa9.96□□□□□ -0.81
COL6A6-201ENST00000358511 ZNF569Q5MCW4 686 aa9.96□□□□□ -0.81
COL6A6-201ENST00000358511 MIPOL1Q8TD10 442 aa9.96□□□□□ -0.81
COL6A6-201ENST00000358511 SH2D4BQ5SQS7 431 aa9.96□□□□□ -0.81
COL6A6-201ENST00000358511 PSMD1Q99460 953 aa9.96□□□□□ -0.81
COL6A6-201ENST00000358511 WDHD1O75717 1129 aaPredicted RBP9.96□□□□□ -0.82
COL6A6-201ENST00000358511 MXRA7P84157 204 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 STMN2Q93045 179 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 MPHOSPH8Q99549 860 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 GUCA1BQ9UMX6 200 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 ARHGEF12Q9NZN5 1544 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 DNMBPQ6XZF7 1577 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 MYL6BP14649 208 aa9.96□□□□□ -0.82
COL6A6-201ENST00000358511 ZGPATQ8N5A5 531 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms