RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 SKILP12757 684 aa12.76□□□□□ -0.37
COL11A1-202ENST00000358392 SYKP43405 635 aa12.76□□□□□ -0.37
COL11A1-202ENST00000358392 SEPT14Q6ZU15 432 aa12.76□□□□□ -0.37
COL11A1-202ENST00000358392 AOPEPQ8N6M6 819 aa12.76□□□□□ -0.37
COL11A1-202ENST00000358392 TTC36A6NLP5 189 aa12.76□□□□□ -0.37
COL11A1-202ENST00000358392 CCDC102BQ68D86 513 aa12.76□□□□□ -0.37
COL11A1-202ENST00000358392 MPRIPQ6WCQ1 1025 aa12.76□□□□□ -0.37
COL11A1-202ENST00000358392 TTF1Q15361 905 aaPredicted RBP12.76□□□□□ -0.37
COL11A1-202ENST00000358392 TBC1D9Q6ZT07 1266 aa12.76□□□□□ -0.37
COL11A1-202ENST00000358392 CWC25Q9NXE8 425 aaPredicted RBP12.76□□□□□ -0.37
COL11A1-202ENST00000358392 TRMT112Q9UI30 125 aaKnown RBP12.76□□□□□ -0.37
COL11A1-202ENST00000358392 UBE2HP62256 183 aa12.75□□□□□ -0.37
COL11A1-202ENST00000358392 RPGRQ92834 1020 aaKnown RBP12.75□□□□□ -0.37
COL11A1-202ENST00000358392 CTAGE9A4FU28 777 aa12.75□□□□□ -0.37
COL11A1-202ENST00000358392 MARCKSP29966 332 aaPredicted RBP12.75□□□□□ -0.37
COL11A1-202ENST00000358392 TMOD3Q9NYL9 352 aa12.75□□□□□ -0.37
COL11A1-202ENST00000358392 NOLC1Q14978 699 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL11A1-202ENST00000358392 EHBP1Q8NDI1 1231 aa12.75□□□□□ -0.37
COL11A1-202ENST00000358392 ODF2LQ9ULJ1 636 aa12.75□□□□□ -0.37
COL11A1-202ENST00000358392 ZNF652Q9Y2D9 606 aa12.75□□□□□ -0.37
COL11A1-202ENST00000358392 TLDC2A0PJX2 215 aa12.75□□□□□ -0.37
COL11A1-202ENST00000358392 STXBP4Q6ZWJ1 553 aa12.75□□□□□ -0.37
COL11A1-202ENST00000358392 IRX3P78415 501 aaPredicted RBP12.75□□□□□ -0.37
COL11A1-202ENST00000358392 SSH1Q8WYL5 1049 aa12.75□□□□□ -0.37
COL11A1-202ENST00000358392 NSD3Q9BZ95 1437 aa12.75□□□□□ -0.37
COL11A1-202ENST00000358392 DDX46Q7L014 1031 aaKnown RBP12.74□□□□□ -0.37
COL11A1-202ENST00000358392 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.74□□□□□ -0.37
COL11A1-202ENST00000358392 PLCB3Q01970 1234 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 CPLX4Q7Z7G2 160 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 OPA1O60313 960 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 CCDC186Q7Z3E2 898 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 SMC1BQ8NDV3 1235 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 MRRFQ96E11 262 aaKnown RBP12.74□□□□□ -0.37
COL11A1-202ENST00000358392 CCDC114Q96M63 670 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 SPAG5Q96R06 1193 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 RNF41Q9H4P4 317 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-202ENST00000358392 ERCC3P19447 782 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 TTC21AQ8NDW8 1320 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 ERCC5P28715 1186 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-202ENST00000358392 UAP1Q16222 522 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-202ENST00000358392 MFSD6Q6ZSS7 791 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 LZTFL1Q9NQ48 299 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 HGSO14964 777 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-202ENST00000358392 SYT1P21579 422 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 CYLC1P35663 651 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-202ENST00000358392 PRIMPOLQ96LW4 560 aa12.74□□□□□ -0.37
COL11A1-202ENST00000358392 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-202ENST00000358392 LRSAM1Q6UWE0 723 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 HEATR3Q7Z4Q2 680 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 UBLCP1Q8WVY7 318 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-202ENST00000358392 DNAJC25Q9H1X3 360 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 NEK1Q96PY6 1258 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 RABEP2Q9H5N1 569 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 GOLGA1Q92805 767 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 GUCA1BQ9UMX6 200 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 RPGRIP1LQ68CZ1 1315 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 C6orf229H3BNL8 230 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 SF3A3Q12874 501 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL11A1-202ENST00000358392 PLS1Q14651 629 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 KANK3Q6NY19 840 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 USP48Q86UV5 1035 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 AFAP1Q8N556 730 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 TCEANC2Q96MN5 208 aa12.73□□□□□ -0.37
COL11A1-202ENST00000358392 IRX5P78411 483 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-202ENST00000358392 EVI5LQ96CN4 794 aa12.72□□□□□ -0.37
COL11A1-202ENST00000358392 PPP1R9BQ96SB3 815 aa12.72□□□□□ -0.37
COL11A1-202ENST00000358392 TTC12Q9H892 705 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-202ENST00000358392 CFAP157Q5JU67 520 aa12.72□□□□□ -0.37
COL11A1-202ENST00000358392 GTF3C6Q969F1 213 aa12.72□□□□□ -0.37
COL11A1-202ENST00000358392 MAP3K2Q9Y2U5 619 aa12.72□□□□□ -0.37
COL11A1-202ENST00000358392 KIF5BP33176 963 aa12.72□□□□□ -0.37
COL11A1-202ENST00000358392 ATP5J2-PTCD1G3V325 749 aa12.72□□□□□ -0.37
COL11A1-202ENST00000358392 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-202ENST00000358392 NBPF8Q3BBV2 869 aa12.72□□□□□ -0.37
COL11A1-202ENST00000358392 CCDC65Q8IXS2 484 aa12.72□□□□□ -0.37
COL11A1-202ENST00000358392 ZBTB3Q9H5J0 574 aa12.72□□□□□ -0.37
COL11A1-202ENST00000358392 FCHSD2O94868 740 aa12.72□□□□□ -0.37
COL11A1-202ENST00000358392 ZNF569Q5MCW4 686 aa12.71□□□□□ -0.37
COL11A1-202ENST00000358392 EPSTI1Q96J88 318 aa12.71□□□□□ -0.37
COL11A1-202ENST00000358392 UTP14AQ9BVJ6 771 aaKnown RBP12.71□□□□□ -0.37
COL11A1-202ENST00000358392 CALM1P0DP23 149 aa12.71□□□□□ -0.37
COL11A1-202ENST00000358392 CALM2P0DP24 149 aa12.71□□□□□ -0.37
COL11A1-202ENST00000358392 CALM3P0DP25 149 aa12.71□□□□□ -0.37
COL11A1-202ENST00000358392 RARSP54136 660 aaKnown RBP12.71□□□□□ -0.37
COL11A1-202ENST00000358392 KRBA2Q6ZNG9 492 aa12.71□□□□□ -0.37
COL11A1-202ENST00000358392 WDR66Q8TBY9 1149 aa12.71□□□□□ -0.37
COL11A1-202ENST00000358392 PLVAPQ9BX97 442 aa12.71□□□□□ -0.37
COL11A1-202ENST00000358392 RMND1Q9NWS8 449 aa12.71□□□□□ -0.37
COL11A1-202ENST00000358392 PPP1R7Q15435 360 aa12.71□□□□□ -0.38
COL11A1-202ENST00000358392 DHX58Q96C10 678 aa12.71□□□□□ -0.38
COL11A1-202ENST00000358392 CCDC172P0C7W6 258 aa12.71□□□□□ -0.38
COL11A1-202ENST00000358392 PROCA1Q8NCQ7 364 aaPredicted RBP12.71□□□□□ -0.38
COL11A1-202ENST00000358392 MIPOL1Q8TD10 442 aa12.71□□□□□ -0.38
COL11A1-202ENST00000358392 STX17P56962 302 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 MAP3K9P80192 1104 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 DDX12PQ92771 950 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 LRRC45Q96CN5 670 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 PLIN2Q99541 437 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 TACC1O75410 805 aa12.7□□□□□ -0.38
COL11A1-202ENST00000358392 PDE1CQ14123 709 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms