RNA–Protein interactions for RNA: ENST00000358064.3

HIST4H4-201, Transcript of histone cluster 4 H4, humanhuman

TSL 1 (best)

Gene HIST4H4, Length 1,918 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-201ENST00000358064 EIF2S2P20042 333 aaKnown RBP13.13□□□□□ -0.31
HIST4H4-201ENST00000358064 CRKLP46109 303 aaKnown RBP13.13□□□□□ -0.31
HIST4H4-201ENST00000358064 CAMK2BQ13554 666 aa13.13□□□□□ -0.31
HIST4H4-201ENST00000358064 GBP4Q96PP9 640 aa13.13□□□□□ -0.31
HIST4H4-201ENST00000358064 TSPYL1Q9H0U9 437 aa13.13□□□□□ -0.31
HIST4H4-201ENST00000358064 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
HIST4H4-201ENST00000358064 SOS1Q07889 1333 aaPredicted RBP13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 IRF6O14896 467 aa13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 HOXB7P09629 217 aa13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 HMGN5P82970 282 aaKnown RBP13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 SLKQ9H2G2 1235 aaPredicted RBP13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 SMC4Q9NTJ3 1288 aa13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 RTCBQ9Y3I0 505 aaKnown RBP13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 R3HCC1Q9Y3T6 440 aaKnown RBP13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 ZNF831Q5JPB2 1677 aa13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 CNTNAP4Q9C0A0 1308 aa13.12□□□□□ -0.31
HIST4H4-201ENST00000358064 SSH1Q8WYL5 1049 aa13.11□□□□□ -0.31
HIST4H4-201ENST00000358064 STARD3NLO95772 234 aa13.11□□□□□ -0.31
HIST4H4-201ENST00000358064 CYP19A1P11511 503 aaPredicted RBP13.11□□□□□ -0.31
HIST4H4-201ENST00000358064 SSFA2P28290 1259 aa13.11□□□□□ -0.31
HIST4H4-201ENST00000358064 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
HIST4H4-201ENST00000358064 CCDC30Q5VVM6 783 aa13.11□□□□□ -0.31
HIST4H4-201ENST00000358064 FLAD1Q8NFF5 587 aa13.11□□□□□ -0.31
HIST4H4-201ENST00000358064 DNAJC2Q99543 621 aaKnown RBP13.11□□□□□ -0.31
HIST4H4-201ENST00000358064 SPON1Q9HCB6 807 aa13.11□□□□□ -0.31
HIST4H4-201ENST00000358064 ALDH1L2Q3SY69 923 aa13.1□□□□□ -0.31
HIST4H4-201ENST00000358064 PRIMPOLQ96LW4 560 aa13.1□□□□□ -0.31
HIST4H4-201ENST00000358064 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
HIST4H4-201ENST00000358064 USP16Q9Y5T5 823 aa13.1□□□□□ -0.31
HIST4H4-201ENST00000358064 TUBGCP6Q96RT7 1819 aa13.1□□□□□ -0.31
HIST4H4-201ENST00000358064 TJP1Q07157 1748 aa13.1□□□□□ -0.31
HIST4H4-201ENST00000358064 TTLL12Q14166 644 aaPredicted RBP13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 INTS5Q6P9B9 1019 aaKnown RBP13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 TBC1D32Q96NH3 1257 aa13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 STK31Q9BXU1 1019 aa13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 TEX13AQ9BXU3 409 aaPredicted RBP13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 MTFR1LQ9H019 292 aa13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 CASZ1Q86V15 1759 aa13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 RPS6KA4O75676 772 aa13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 NASPP49321 788 aaPredicted RBP13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 FAM193AP78312 1265 aa13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 SH3D19Q5HYK7 790 aa13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 TRAPPC3LQ5T215 181 aa13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 SLC16A10Q8TF71 515 aa13.09□□□□□ -0.31
HIST4H4-201ENST00000358064 MYH14Q7Z406 1995 aaKnown RBP13.08□□□□□ -0.31
HIST4H4-201ENST00000358064 DDX27Q96GQ7 796 aaKnown RBP13.08□□□□□ -0.32
HIST4H4-201ENST00000358064 CHPF2Q9P2E5 772 aa13.08□□□□□ -0.32
HIST4H4-201ENST00000358064 ZBTB1Q9Y2K1 713 aa13.08□□□□□ -0.32
HIST4H4-201ENST00000358064 UBR3Q6ZT12 1888 aa13.08□□□□□ -0.32
HIST4H4-201ENST00000358064 LAMB4A4D0S4 1761 aa13.08□□□□□ -0.32
HIST4H4-201ENST00000358064 PLIN1O60240 522 aa13.07□□□□□ -0.32
HIST4H4-201ENST00000358064 DNTTIP2Q5QJE6 756 aaKnown RBP13.07□□□□□ -0.32
HIST4H4-201ENST00000358064 MSL1Q68DK7 614 aa13.07□□□□□ -0.32
HIST4H4-201ENST00000358064 MRPL50Q8N5N7 158 aaKnown RBP13.07□□□□□ -0.32
HIST4H4-201ENST00000358064 TBC1D2Q9BYX2 928 aa13.07□□□□□ -0.32
HIST4H4-201ENST00000358064 QSER1Q2KHR3 1735 aa13.07□□□□□ -0.32
HIST4H4-201ENST00000358064 CICQ96RK0 1608 aaPredicted RBP13.07□□□□□ -0.32
HIST4H4-201ENST00000358064 GOLGB1Q14789 3259 aaKnown RBP13.07□□□□□ -0.32
HIST4H4-201ENST00000358064 CCDC66A2RUB6 948 aa13.07□□□□□ -0.32
HIST4H4-201ENST00000358064 RFC4P35249 363 aa13.07□□□□□ -0.32
HIST4H4-201ENST00000358064 DBF4Q9UBU7 674 aaPredicted RBP13.07□□□□□ -0.32
HIST4H4-201ENST00000358064 USTQ9Y2C2 406 aa13.07□□□□□ -0.32
HIST4H4-201ENST00000358064 ANXA1P04083 346 aa13.06□□□□□ -0.32
HIST4H4-201ENST00000358064 A1BGP04217 495 aa13.06□□□□□ -0.32
HIST4H4-201ENST00000358064 GTF2F1P35269 517 aaKnown RBP eCLIP13.06□□□□□ -0.32
HIST4H4-201ENST00000358064 PPP1R1BQ9UD71 204 aaPredicted RBP13.06□□□□□ -0.32
HIST4H4-201ENST00000358064 KIF16BQ96L93 1317 aa13.06□□□□□ -0.32
HIST4H4-201ENST00000358064 RBM47A0AV96 593 aaKnown RBP13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 GOLGA6L22H0YM25 854 aa13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 SMARCA5O60264 1052 aaPredicted RBP13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 PTGER2P43116 358 aa13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 IRX3P78415 501 aaPredicted RBP13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 BCCIPQ9P287 314 aaKnown RBP eCLIP13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 NOB1Q9ULX3 412 aaKnown RBP13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 MYL6BP14649 208 aa13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 MYRIPQ8NFW9 859 aa13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 CCDC39Q9UFE4 941 aa13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 ZKSCAN5Q9Y2L8 839 aa13.05□□□□□ -0.32
HIST4H4-201ENST00000358064 POLD1P28340 1107 aa13.04□□□□□ -0.32
HIST4H4-201ENST00000358064 G2E3Q7L622 706 aa13.04□□□□□ -0.32
HIST4H4-201ENST00000358064 CREBRFQ8IUR6 639 aa13.04□□□□□ -0.32
HIST4H4-201ENST00000358064 OXER1Q8TDS5 423 aa13.04□□□□□ -0.32
HIST4H4-201ENST00000358064 DDX21Q9NR30 783 aaKnown RBP eCLIP13.04□□□□□ -0.32
HIST4H4-201ENST00000358064 GABPB1Q06547 395 aaPredicted RBP13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 PDIA6Q15084 440 aa13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 ZKSCAN2Q63HK3 967 aa13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 GIGYF2Q6Y7W6 1299 aaKnown RBP13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 FBXO22Q8NEZ5 403 aa13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 CALR3Q96L12 384 aaKnown RBP13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 ZNF830Q96NB3 372 aaPredicted RBP13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 FEZ1Q99689 392 aa13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 PHAXQ9H814 394 aaKnown RBP13.03□□□□□ -0.32
HIST4H4-201ENST00000358064 KIAA1522Q9P206 1035 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms