RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PDCP20941 246 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 PSMA5P28066 241 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 FAM193AP78312 1265 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 SYCP1Q15431 976 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 AXDND1Q5T1B0 1012 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 FILIP1Q7Z7B0 1213 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 EVI5LQ96CN4 794 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 PRAMEF22A3QJZ6 481 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 GOLGA6L19H0YKK7 550 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 SLC27A2O14975 620 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 HTATSF1O43719 755 aaKnown RBP9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 MYCNP04198 464 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 NECTIN1Q15223 517 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 PROSER3Q2NL68 480 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 RNF20Q5VTR2 975 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 KIF18AQ8NI77 898 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 PPP6R1Q9UPN7 881 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 TTC41PQ6P2S7 1318 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 EIF4A1P60842 406 aaKnown RBP9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 CREBRFQ8IUR6 639 aa9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 ERCC4Q92889 916 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 EAF2Q96CJ1 260 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-201ENST00000357235 EPB41L2O43491 1005 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 ZNF530Q6P9A1 599 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 LRRC59Q96AG4 307 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 SCAND2PQ9GZW5 306 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 TRMT1Q9NXH9 659 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 RSPH14Q9UHP6 348 aa9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 TTC21AQ8NDW8 1320 aa9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 KDRP35968 1356 aa9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 LOC102724159A0A0B4J2E5 919 aa9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 BECN2A8MW95 431 aa9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 CHGBP05060 677 aa9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 HNRNPH2P55795 449 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 PWP2Q15269 919 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 CCDC112Q8NEF3 446 aa9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 LEO1Q8WVC0 666 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 EID1Q9Y6B2 187 aa9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 USP31Q70CQ4 1352 aa9.68□□□□□ -0.86
CDC42SE1-201ENST00000357235 GTF2A1P52655 376 aaPredicted RBP9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 ARID5BQ14865 1188 aa9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 ZNF589Q86UQ0 364 aaPredicted RBP9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 IL17RAQ96F46 866 aa9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 PEAK1Q9H792 1746 aa9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 MYL6BP14649 208 aa9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 GUCY1B3Q02153 619 aa9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 RAD51AP2Q09MP3 1159 aa9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 ZSCAN25Q6NSZ9 544 aa9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 BRF1Q92994 677 aa9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 ZNF622Q969S3 477 aaKnown RBP eCLIP9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 SIRT1Q96EB6 747 aa9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 FTOQ9C0B1 505 aaKnown RBP eCLIP9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 BICC1Q9H694 974 aaKnown RBP9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 AGLP35573 1532 aa9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 NPHP3Q7Z494 1330 aa9.67□□□□□ -0.86
CDC42SE1-201ENST00000357235 ZNF75DP51815 510 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 NBPF6Q5VWK0 638 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 CCDC129Q6ZRS4 1044 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 CNPY4Q8N129 248 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 CACTINQ8WUQ7 758 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 NBPF4Q96M43 638 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 TM6SF1Q9BZW5 370 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 DBF4Q9UBU7 674 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 C3P01024 1663 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 TMEM2Q9UHN6 1383 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 ERC1Q8IUD2 1116 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 MAP4K1Q92918 833 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 DDX19AQ9NUU7 478 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 KCNG1Q9UIX4 513 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 SASH1O94885 1247 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 RPS6KB1P23443 525 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 PIP4K2AP48426 406 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 HSPA2P54652 639 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 ANKRD1Q15327 319 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 CCDC144BQ3MJ40 725 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 CCDC144CPQ8IYA2 1237 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 SUCLG2Q96I99 432 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 RASSF4Q9H2L5 321 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 USP16Q9Y5T5 823 aa9.66□□□□□ -0.86
CDC42SE1-201ENST00000357235 ITSN1Q15811 1721 aa9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 TNRQ92752 1358 aa9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 C1orf141Q5JVX7 400 aa9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 RIC3Q7Z5B4 369 aa9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 SYTL4Q96C24 671 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 PGBD1Q96JS3 809 aa9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 SEC62Q99442 399 aaKnown RBP9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 MON2Q7Z3U7 1717 aa9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 CCT2P78371 535 aaKnown RBP9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 TOB2Q14106 344 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 CTR9Q6PD62 1173 aa9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 FMNL2Q96PY5 1086 aa9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 CLSTN2Q9H4D0 955 aa9.65□□□□□ -0.86
CDC42SE1-201ENST00000357235 ADCY9O60503 1353 aa9.65□□□□□ -0.87
CDC42SE1-201ENST00000357235 SMTNL1A8MU46 457 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 GRM8O00222 908 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 SAMD1Q6SPF0 538 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 Q6ZUG5 572 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 NOL10Q9BSC4 688 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 SETD1BQ9UPS6 1966 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms