RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 SH2B1Q9NRF2 756 aaPredicted RBP10.07□□□□□ -0.8
GM2A-201ENST00000357164 USP31Q70CQ4 1352 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 KIF3BO15066 747 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 SKILP12757 684 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 MCCP23508 829 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 NCAPHQ15003 741 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 KIFC2Q96AC6 838 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 RASSF4Q9H2L5 321 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 RSPH14Q9UHP6 348 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 NCAPD2Q15021 1401 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 TTC41PQ6P2S7 1318 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 TOB2Q14106 344 aaPredicted RBP10.06□□□□□ -0.8
GM2A-201ENST00000357164 CCDC158Q5M9N0 1113 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 ZSCAN16Q9H4T2 348 aaPredicted RBP10.06□□□□□ -0.8
GM2A-201ENST00000357164 COL15A1P39059 1388 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 CCDC69A6NI79 296 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 USP5P45974 858 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 GOLPH3LQ9H4A5 285 aa10.06□□□□□ -0.8
GM2A-201ENST00000357164 CAMTA1Q9Y6Y1 1673 aa10.05□□□□□ -0.8
GM2A-201ENST00000357164 SALL1Q9NSC2 1324 aa10.05□□□□□ -0.8
GM2A-201ENST00000357164 ZC3H4Q9UPT8 1303 aaKnown RBP10.05□□□□□ -0.8
GM2A-201ENST00000357164 PTH1RQ03431 593 aa10.05□□□□□ -0.8
GM2A-201ENST00000357164 CERS3Q8IU89 383 aa10.05□□□□□ -0.8
GM2A-201ENST00000357164 DNAJC25Q9H1X3 360 aa10.05□□□□□ -0.8
GM2A-201ENST00000357164 CCT4P50991 539 aaKnown RBP10.05□□□□□ -0.8
GM2A-201ENST00000357164 SRPK2P78362 688 aaKnown RBP10.05□□□□□ -0.8
GM2A-201ENST00000357164 CTR9Q6PD62 1173 aa10.05□□□□□ -0.8
GM2A-201ENST00000357164 ANO2Q9NQ90 1003 aa10.05□□□□□ -0.8
GM2A-201ENST00000357164 EFCAB8A8MWE9 144 aa10.05□□□□□ -0.8
GM2A-201ENST00000357164 ZNF165P49910 485 aa10.05□□□□□ -0.8
GM2A-201ENST00000357164 MAP3K9P80192 1104 aa10.05□□□□□ -0.8
GM2A-201ENST00000357164 LMOD3Q0VAK6 560 aa10.05□□□□□ -0.8
GM2A-201ENST00000357164 MLECQ14165 292 aa10.05□□□□□ -0.8
GM2A-201ENST00000357164 ILDR1Q86SU0 546 aaPredicted RBP10.05□□□□□ -0.8
GM2A-201ENST00000357164 HNRNPLLQ8WVV9 542 aaKnown RBP10.05□□□□□ -0.8
GM2A-201ENST00000357164 ZSCAN31Q96LW9 406 aaPredicted RBP10.05□□□□□ -0.8
GM2A-201ENST00000357164 EMILIN1Q9Y6C2 1016 aa10.04□□□□□ -0.8
GM2A-201ENST00000357164 CPA1P15085 419 aa10.04□□□□□ -0.8
GM2A-201ENST00000357164 NCAPGQ9BPX3 1015 aa10.04□□□□□ -0.8
GM2A-201ENST00000357164 TERF2IPQ9NYB0 399 aa10.04□□□□□ -0.8
GM2A-201ENST00000357164 ZSCAN26Q16670 478 aa10.04□□□□□ -0.8
GM2A-201ENST00000357164 KRBA2Q6ZNG9 492 aa10.04□□□□□ -0.8
GM2A-201ENST00000357164 ZCCHC17Q9NP64 241 aaKnown RBP10.04□□□□□ -0.8
GM2A-201ENST00000357164 SBNO1A3KN83 1393 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 HMOX1P09601 288 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 DCTN1Q14203 1278 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 CAMK4Q16566 473 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 RAB21Q9UL25 225 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 USP16Q9Y5T5 823 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 IDI1Q13907 227 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 CKAP2LQ8IYA6 745 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 USP44Q9H0E7 712 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 BCL9LQ86UU0 1499 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 PSME1Q06323 249 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 USPL1Q5W0Q7 1092 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 SMARCC2Q8TAQ2 1214 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 MAP4K1Q92918 833 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 SCAND2PQ9GZW5 306 aaPredicted RBP10.03□□□□□ -0.8
GM2A-201ENST00000357164 TNMDQ9H2S6 317 aa10.03□□□□□ -0.8
GM2A-201ENST00000357164 RRP15Q9Y3B9 282 aaKnown RBP10.03□□□□□ -0.8
GM2A-201ENST00000357164 ANKARQ7Z5J8 1434 aa10.02□□□□□ -0.8
GM2A-201ENST00000357164 VWA3AA6NCI4 1184 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 HMMRO75330 724 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 ADAM21Q9UKJ8 722 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 RCOR1Q9UKL0 485 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 SEC31AO94979 1220 aaKnown RBP10.02□□□□□ -0.81
GM2A-201ENST00000357164 GNAI2P04899 355 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 KRT85P78386 507 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 FAM173BQ6P4H8 233 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 CCDC83Q8IWF9 413 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.02□□□□□ -0.81
GM2A-201ENST00000357164 TRIM5Q9C035 493 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 SMC3Q9UQE7 1217 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 RGPD8O14715 1765 aaPredicted RBP10.02□□□□□ -0.81
GM2A-201ENST00000357164 ATP2B1P20020 1258 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 MAGEA9P43362 315 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 CORO7P57737 925 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 ETF1P62495 437 aaKnown RBP10.02□□□□□ -0.81
GM2A-201ENST00000357164 TBX2Q13207 712 aaPredicted RBP10.02□□□□□ -0.81
GM2A-201ENST00000357164 MRFAP1Q9Y605 127 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 TAF6LQ9Y6J9 622 aa10.02□□□□□ -0.81
GM2A-201ENST00000357164 SLIT1O75093 1534 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 SPEF2Q9C093 1822 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 OAS2P29728 719 aaKnown RBP10.01□□□□□ -0.81
GM2A-201ENST00000357164 ACTN2P35609 894 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 ARHGAP29Q52LW3 1261 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 FOXR1Q6PIV2 292 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 CHMP3Q9Y3E7 222 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 LMTK3Q96Q04 1460 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 GSDMDP57764 484 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 ZBTB9Q96C00 473 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 LARP6Q9BRS8 491 aaKnown RBP10.01□□□□□ -0.81
GM2A-201ENST00000357164 CHMP4AQ9BY43 222 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 LRRFIP2Q9Y608 721 aaKnown RBP10.01□□□□□ -0.81
GM2A-201ENST00000357164 CDK11BP21127 795 aaKnown RBP10.01□□□□□ -0.81
GM2A-201ENST00000357164 MTX1Q13505 466 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 DNAI1Q9UI46 699 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 C5P01031 1676 aa10.01□□□□□ -0.81
GM2A-201ENST00000357164 SMC1AQ14683 1233 aaKnown RBP10□□□□□ -0.81
GM2A-201ENST00000357164 CASTP20810 708 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms