RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 MARCH6O60337 910 aa14.61□□□□□ -0.07
BDNF-202ENST00000356660 GSDMDP57764 484 aa14.61□□□□□ -0.07
BDNF-202ENST00000356660 OLFM4Q6UX06 510 aa14.61□□□□□ -0.07
BDNF-202ENST00000356660 TTC21BQ7Z4L5 1316 aa14.6□□□□□ -0.07
BDNF-202ENST00000356660 KRT32Q14532 448 aa14.6□□□□□ -0.07
BDNF-202ENST00000356660 CHST3Q7LGC8 479 aa14.6□□□□□ -0.07
BDNF-202ENST00000356660 MAP3K2Q9Y2U5 619 aa14.6□□□□□ -0.07
BDNF-202ENST00000356660 NDUFB9Q9Y6M9 179 aa14.6□□□□□ -0.07
BDNF-202ENST00000356660 CWF19L2Q2TBE0 894 aaKnown RBP14.6□□□□□ -0.07
BDNF-202ENST00000356660 CNPY4Q8N129 248 aa14.6□□□□□ -0.07
BDNF-202ENST00000356660 TMEM51Q9NW97 253 aa14.6□□□□□ -0.07
BDNF-202ENST00000356660 MAP3K19Q56UN5 1328 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 LRRC8AQ8IWT6 810 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 EYA1Q99502 592 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 STAP2Q9UGK3 403 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 A0A1B0GVL5 298 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 SLC27A2O14975 620 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 LMAN1P49257 510 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 TMEM87AQ8NBN3 555 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 EDC3Q96F86 508 aaKnown RBP14.59□□□□□ -0.07
BDNF-202ENST00000356660 CWC15Q9P013 229 aaKnown RBP14.59□□□□□ -0.07
BDNF-202ENST00000356660 CTNNA3Q9UI47 895 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 SPHKAPQ2M3C7 1700 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 FAM193AP78312 1265 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 HSP90B2PQ58FF3 399 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 AK7Q96M32 723 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 PHF8Q9UPP1 1060 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 MED14O60244 1454 aa14.59□□□□□ -0.07
BDNF-202ENST00000356660 CAVIN2O95810 425 aa14.58□□□□□ -0.07
BDNF-202ENST00000356660 SLC3A2P08195 630 aaKnown RBP14.58□□□□□ -0.07
BDNF-202ENST00000356660 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.58□□□□□ -0.07
BDNF-202ENST00000356660 LRRC7Q96NW7 1537 aa14.58□□□□□ -0.08
BDNF-202ENST00000356660 CCDC144BQ3MJ40 725 aa14.58□□□□□ -0.08
BDNF-202ENST00000356660 LEKR1Q6ZMV7 388 aa14.58□□□□□ -0.08
BDNF-202ENST00000356660 CCDC144CPQ8IYA2 1237 aa14.58□□□□□ -0.08
BDNF-202ENST00000356660 KLHDC4Q8TBB5 520 aa14.58□□□□□ -0.08
BDNF-202ENST00000356660 SECISBP2LQ93073 1101 aaKnown RBP14.58□□□□□ -0.08
BDNF-202ENST00000356660 USP27XA6NNY8 438 aa14.58□□□□□ -0.08
BDNF-202ENST00000356660 DHX16O60231 1041 aaKnown RBP14.58□□□□□ -0.08
BDNF-202ENST00000356660 GNG11P61952 73 aa14.58□□□□□ -0.08
BDNF-202ENST00000356660 DDX46Q7L014 1031 aaKnown RBP14.58□□□□□ -0.08
BDNF-202ENST00000356660 ST7Q9NRC1 585 aa14.58□□□□□ -0.08
BDNF-202ENST00000356660 CCP110O43303 1012 aa14.57□□□□□ -0.08
BDNF-202ENST00000356660 FBXO38Q6PIJ6 1188 aa14.57□□□□□ -0.08
BDNF-202ENST00000356660 SSH3Q8TE77 659 aa14.57□□□□□ -0.08
BDNF-202ENST00000356660 FTOQ9C0B1 505 aaKnown RBP eCLIP14.57□□□□□ -0.08
BDNF-202ENST00000356660 TMX4Q9H1E5 349 aaPredicted RBP14.57□□□□□ -0.08
BDNF-202ENST00000356660 DDX41Q9UJV9 622 aaKnown RBP14.57□□□□□ -0.08
BDNF-202ENST00000356660 SSH2Q76I76 1423 aa14.57□□□□□ -0.08
BDNF-202ENST00000356660 ATP10DQ9P241 1426 aa14.57□□□□□ -0.08
BDNF-202ENST00000356660 KIF1BO60333 1816 aa14.57□□□□□ -0.08
BDNF-202ENST00000356660 RPAP1Q9BWH6 1393 aaPredicted RBP14.57□□□□□ -0.08
BDNF-202ENST00000356660 CCDC129Q6ZRS4 1044 aa14.57□□□□□ -0.08
BDNF-202ENST00000356660 ZSCAN16Q9H4T2 348 aaPredicted RBP14.57□□□□□ -0.08
BDNF-202ENST00000356660 CNNM1Q9NRU3 951 aa14.57□□□□□ -0.08
BDNF-202ENST00000356660 TOP1P11387 765 aaKnown RBP14.57□□□□□ -0.08
BDNF-202ENST00000356660 C11orf57Q6ZUT1 292 aaPredicted RBP14.57□□□□□ -0.08
BDNF-202ENST00000356660 ZSWIM6Q9HCJ5 1215 aa14.57□□□□□ -0.08
BDNF-202ENST00000356660 MYOM1P52179 1685 aa14.56□□□□□ -0.08
BDNF-202ENST00000356660 KIAA0232Q92628 1395 aa14.56□□□□□ -0.08
BDNF-202ENST00000356660 C10orf67Q8IYJ2 551 aa14.56□□□□□ -0.08
BDNF-202ENST00000356660 NCOA5Q9HCD5 579 aaKnown RBP14.56□□□□□ -0.08
BDNF-202ENST00000356660 RPS6KB1P23443 525 aa14.56□□□□□ -0.08
BDNF-202ENST00000356660 APOBRQ0VD83 1088 aa14.56□□□□□ -0.08
BDNF-202ENST00000356660 NEK11Q8NG66 645 aa14.56□□□□□ -0.08
BDNF-202ENST00000356660 ANKRD7Q92527 254 aa14.56□□□□□ -0.08
BDNF-202ENST00000356660 TTC41PQ6P2S7 1318 aa14.56□□□□□ -0.08
BDNF-202ENST00000356660 PIP4K2AP48426 406 aaPredicted RBP14.55□□□□□ -0.08
BDNF-202ENST00000356660 TERF2Q15554 542 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 KMT5BQ4FZB7 885 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
BDNF-202ENST00000356660 CCDC102AQ96A19 550 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 MCM6Q14566 821 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 CHRNA2Q15822 529 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 OTUD7BQ6GQQ9 843 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 TTC14Q96N46 770 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 UTP14AQ9BVJ6 771 aaKnown RBP14.55□□□□□ -0.08
BDNF-202ENST00000356660 CARD6Q9BX69 1037 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 PNPLA6Q8IY17 1366 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 ATP5J2-PTCD1G3V325 749 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 HAND2P61296 217 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 CPLX3Q8WVH0 158 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 C8orf76Q96K31 380 aa14.55□□□□□ -0.08
BDNF-202ENST00000356660 NUTM2BA6NNL0 878 aaPredicted RBP14.54□□□□□ -0.08
BDNF-202ENST00000356660 NUTM2EB1AL46 878 aaPredicted RBP14.54□□□□□ -0.08
BDNF-202ENST00000356660 MARCKSP29966 332 aaPredicted RBP14.54□□□□□ -0.08
BDNF-202ENST00000356660 NUTM2AQ8IVF1 878 aaPredicted RBP14.54□□□□□ -0.08
BDNF-202ENST00000356660 TDRD7Q8NHU6 1098 aaKnown RBP14.54□□□□□ -0.08
BDNF-202ENST00000356660 MYD88Q99836 296 aa14.54□□□□□ -0.08
BDNF-202ENST00000356660 POGZQ7Z3K3 1410 aa14.54□□□□□ -0.08
BDNF-202ENST00000356660 A0A0D9SFI3 127 aa14.54□□□□□ -0.08
BDNF-202ENST00000356660 CASQ1P31415 396 aa14.54□□□□□ -0.08
BDNF-202ENST00000356660 UBASH3AP57075 661 aa14.54□□□□□ -0.08
BDNF-202ENST00000356660 PTPN21Q16825 1174 aa14.54□□□□□ -0.08
BDNF-202ENST00000356660 PI4K2BQ8TCG2 481 aa14.54□□□□□ -0.08
BDNF-202ENST00000356660 KAT6BQ8WYB5 2073 aa14.54□□□□□ -0.08
BDNF-202ENST00000356660 MRPS27Q92552 414 aaKnown RBP14.54□□□□□ -0.08
BDNF-202ENST00000356660 ASXL2Q76L83 1435 aa14.54□□□□□ -0.08
BDNF-202ENST00000356660 AOX1Q06278 1338 aa14.54□□□□□ -0.08
BDNF-202ENST00000356660 CCDC150Q8NCX0 1101 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms