RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 EXOC6BQ9Y2D4 811 aa29.92■■■□□ 2.38
CHKA-202ENST00000356135 RFX5P48382 616 aaPredicted RBP29.91■■■□□ 2.38
CHKA-202ENST00000356135 GREM2Q9H772 168 aa29.91■■■□□ 2.38
CHKA-202ENST00000356135 SMC5Q8IY18 1101 aa29.9■■■□□ 2.38
CHKA-202ENST00000356135 PARP3Q9Y6F1 533 aa29.9■■■□□ 2.38
CHKA-202ENST00000356135 APBB1O00213 710 aa29.89■■■□□ 2.38
CHKA-202ENST00000356135 ZBTB7AO95365 584 aa29.89■■■□□ 2.38
CHKA-202ENST00000356135 SURF6O75683 361 aaKnown RBP29.88■■■□□ 2.37
CHKA-202ENST00000356135 SKAP1Q86WV1 359 aa29.88■■■□□ 2.37
CHKA-202ENST00000356135 ZNF594Q96JF6 807 aaPredicted RBP29.88■■■□□ 2.37
CHKA-202ENST00000356135 SLC16A10Q8TF71 515 aa29.87■■■□□ 2.37
CHKA-202ENST00000356135 PTPN12Q05209 780 aaKnown RBP29.87■■■□□ 2.37
CHKA-202ENST00000356135 GCC1Q96CN9 775 aa29.87■■■□□ 2.37
CHKA-202ENST00000356135 HSP90B1P14625 803 aaKnown RBP29.86■■■□□ 2.37
CHKA-202ENST00000356135 ST5P78524 1137 aa29.86■■■□□ 2.37
CHKA-202ENST00000356135 CCDC57Q2TAC2 916 aa29.86■■■□□ 2.37
CHKA-202ENST00000356135 NLRP3Q96P20 1036 aa29.86■■■□□ 2.37
CHKA-202ENST00000356135 SIL1Q9H173 461 aa29.86■■■□□ 2.37
CHKA-202ENST00000356135 ITGA6P23229 1130 aa29.85■■■□□ 2.37
CHKA-202ENST00000356135 BCL11AQ9H165 835 aa29.85■■■□□ 2.37
CHKA-202ENST00000356135 SEC31BQ9NQW1 1179 aa29.85■■■□□ 2.37
CHKA-202ENST00000356135 ATF5Q9Y2D1 282 aaPredicted RBP29.85■■■□□ 2.37
CHKA-202ENST00000356135 LAMB2P55268 1798 aa29.84■■■□□ 2.37
CHKA-202ENST00000356135 MYH3P11055 1940 aa29.84■■■□□ 2.37
CHKA-202ENST00000356135 IFIT5Q13325 482 aaKnown RBP29.84■■■□□ 2.37
CHKA-202ENST00000356135 ANKRD45Q5TZF3 282 aa29.84■■■□□ 2.37
CHKA-202ENST00000356135 SF3B3Q15393 1217 aaKnown RBP29.83■■■□□ 2.37
CHKA-202ENST00000356135 CCDC152Q4G0S7 254 aa29.83■■■□□ 2.37
CHKA-202ENST00000356135 PDZRN3Q9UPQ7 1066 aa29.83■■■□□ 2.37
CHKA-202ENST00000356135 NOP58Q9Y2X3 529 aaKnown RBP29.83■■■□□ 2.37
CHKA-202ENST00000356135 TNRC6CQ9HCJ0 1690 aaKnown RBP29.83■■■□□ 2.37
CHKA-202ENST00000356135 COPRSQ9NQ92 184 aa29.82■■■□□ 2.36
CHKA-202ENST00000356135 CASZ1Q86V15 1759 aa29.81■■■□□ 2.36
CHKA-202ENST00000356135 ANKRD18BA2A2Z9 1011 aa29.81■■■□□ 2.36
CHKA-202ENST00000356135 SMARCA5O60264 1052 aaPredicted RBP29.81■■■□□ 2.36
CHKA-202ENST00000356135 PUS3Q9BZE2 481 aaKnown RBP29.8■■■□□ 2.36
CHKA-202ENST00000356135 NRXN2Q9P2S2 1712 aa29.8■■■□□ 2.36
CHKA-202ENST00000356135 OS9Q13438 667 aaPredicted RBP29.79■■■□□ 2.36
CHKA-202ENST00000356135 TAF7LQ5H9L4 462 aa29.79■■■□□ 2.36
CHKA-202ENST00000356135 NUCB1Q02818 461 aa29.78■■■□□ 2.36
CHKA-202ENST00000356135 G3BP1Q13283 466 aaKnown RBP eCLIP29.78■■■□□ 2.363e-6■■□□□ 13.8
CHKA-202ENST00000356135 LRRC24Q50LG9 513 aa29.78■■■□□ 2.36
CHKA-202ENST00000356135 MTFR1LQ9H019 292 aa29.78■■■□□ 2.36
CHKA-202ENST00000356135 TSHZ2Q9NRE2 1034 aa29.78■■■□□ 2.36
CHKA-202ENST00000356135 LNPKQ9C0E8 428 aa29.77■■■□□ 2.36
CHKA-202ENST00000356135 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.77■■■□□ 2.36
CHKA-202ENST00000356135 BRIP1Q9BX63 1249 aa29.77■■■□□ 2.36
CHKA-202ENST00000356135 COL4A1P02462 1669 aa29.77■■■□□ 2.36
CHKA-202ENST00000356135 SASH1O94885 1247 aa29.76■■■□□ 2.35
CHKA-202ENST00000356135 RTL9Q8NET4 1388 aa29.75■■■□□ 2.35
CHKA-202ENST00000356135 RAB11FIP3O75154 756 aa29.75■■■□□ 2.35
CHKA-202ENST00000356135 ATG9AQ7Z3C6 839 aa29.75■■■□□ 2.35
CHKA-202ENST00000356135 CHD1LQ86WJ1 897 aa29.75■■■□□ 2.35
CHKA-202ENST00000356135 RHPN1Q8TCX5 695 aa29.75■■■□□ 2.35
CHKA-202ENST00000356135 LRRCC1Q9C099 1032 aa29.75■■■□□ 2.35
CHKA-202ENST00000356135 IL1RAPL2Q9NP60 686 aa29.75■■■□□ 2.35
CHKA-202ENST00000356135 RIC1Q4ADV7 1423 aa29.74■■■□□ 2.35
CHKA-202ENST00000356135 EYA2O00167 538 aa29.74■■■□□ 2.35
CHKA-202ENST00000356135 HSP90AB4PQ58FF6 505 aa29.74■■■□□ 2.35
CHKA-202ENST00000356135 LDHAL6AQ6ZMR3 332 aa29.74■■■□□ 2.35
CHKA-202ENST00000356135 C16orf71Q8IYS4 520 aaPredicted RBP29.74■■■□□ 2.35
CHKA-202ENST00000356135 CELF1Q92879 486 aaKnown RBP29.74■■■□□ 2.35
CHKA-202ENST00000356135 TAF1P21675 1872 aa29.73■■■□□ 2.35
CHKA-202ENST00000356135 CRY2Q49AN0 593 aa29.73■■■□□ 2.35
CHKA-202ENST00000356135 ANKRD31Q8N7Z5 1873 aa29.73■■■□□ 2.35
CHKA-202ENST00000356135 KLRG2A4D1S0 409 aaPredicted RBP29.72■■■□□ 2.35
CHKA-202ENST00000356135 PDE4AP27815 886 aa29.72■■■□□ 2.35
CHKA-202ENST00000356135 DDX46Q7L014 1031 aaKnown RBP29.72■■■□□ 2.35
CHKA-202ENST00000356135 KIF1BPQ96EK5 621 aa29.72■■■□□ 2.35
CHKA-202ENST00000356135 RPGRQ92834 1020 aaKnown RBP29.71■■■□□ 2.35
CHKA-202ENST00000356135 TFCP2Q12800 502 aa29.7■■■□□ 2.35
CHKA-202ENST00000356135 CNNM1Q9NRU3 951 aa29.7■■■□□ 2.35
CHKA-202ENST00000356135 RIPOR2Q9Y4F9 1068 aa29.7■■■□□ 2.35
CHKA-202ENST00000356135 IGHMBP2P38935 993 aaKnown RBP29.69■■■□□ 2.34
CHKA-202ENST00000356135 CDC5LQ99459 802 aaKnown RBP29.69■■■□□ 2.34
CHKA-202ENST00000356135 MPHOSPH8Q99549 860 aa29.69■■■□□ 2.34
CHKA-202ENST00000356135 CIAO1O76071 339 aa29.69■■■□□ 2.34
CHKA-202ENST00000356135 PDE6BP35913 854 aa29.69■■■□□ 2.34
CHKA-202ENST00000356135 RGS3P49796 1198 aa29.69■■■□□ 2.34
CHKA-202ENST00000356135 ERC1Q8IUD2 1116 aa29.69■■■□□ 2.34
CHKA-202ENST00000356135 ANKRD18AQ8IVF6 992 aa29.69■■■□□ 2.34
CHKA-202ENST00000356135 ZBTB47Q9UFB7 747 aaPredicted RBP29.69■■■□□ 2.34
CHKA-202ENST00000356135 POLD1P28340 1107 aa29.68■■■□□ 2.34
CHKA-202ENST00000356135 IL15P40933 162 aaPredicted RBP29.68■■■□□ 2.34
CHKA-202ENST00000356135 RPS8P62241 208 aaKnown RBP29.67■■■□□ 2.34
CHKA-202ENST00000356135 OTUD7AQ8TE49 926 aaPredicted RBP29.67■■■□□ 2.34
CHKA-202ENST00000356135 SGIP1Q9BQI5 828 aa29.67■■■□□ 2.34
CHKA-202ENST00000356135 SRGNP10124 158 aa29.67■■■□□ 2.34
CHKA-202ENST00000356135 SLC51AQ86UW1 340 aa29.67■■■□□ 2.34
CHKA-202ENST00000356135 RBM17Q96I25 401 aaKnown RBP29.66■■■□□ 2.34
CHKA-202ENST00000356135 FBXO3Q9UK99 471 aa29.66■■■□□ 2.34
CHKA-202ENST00000356135 CHRNA5P30532 468 aa29.65■■■□□ 2.34
CHKA-202ENST00000356135 GRAPQ13588 217 aa29.65■■■□□ 2.34
CHKA-202ENST00000356135 C2CD5Q86YS7 1000 aa29.65■■■□□ 2.34
CHKA-202ENST00000356135 GRAPLQ8TC17 118 aaPredicted RBP29.65■■■□□ 2.34
CHKA-202ENST00000356135 HOXA10P31260 410 aaPredicted RBP29.64■■■□□ 2.34
CHKA-202ENST00000356135 PTGER2P43116 358 aa29.64■■■□□ 2.34
CHKA-202ENST00000356135 HELBQ8NG08 1087 aaPredicted RBP29.64■■■□□ 2.34
CHKA-202ENST00000356135 SPEF2Q9C093 1822 aa29.64■■■□□ 2.34
CHKA-202ENST00000356135 METTL24Q5JXM2 366 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms