RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.66■□□□□ 0.741e-9■■□□□ 13.5
COL27A1-201ENST00000356083 V9GYY5 206 aaPredicted RBP19.66■□□□□ 0.74
COL27A1-201ENST00000356083 SMC6Q96SB8 1091 aa19.66■□□□□ 0.74
COL27A1-201ENST00000356083 HYPKQ9NX55 129 aa19.66■□□□□ 0.74
COL27A1-201ENST00000356083 PPP1R21Q6ZMI0 780 aa19.66■□□□□ 0.74
COL27A1-201ENST00000356083 LDHAL6AQ6ZMR3 332 aa19.66■□□□□ 0.74
COL27A1-201ENST00000356083 PKNOX2Q96KN3 472 aa19.66■□□□□ 0.74
COL27A1-201ENST00000356083 DUSP27Q5VZP5 1158 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 GDPD2Q9HCC8 539 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 FAM13AO94988 1023 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 IFI16Q16666 785 aaKnown RBP19.65■□□□□ 0.74
COL27A1-201ENST00000356083 WAPLQ7Z5K2 1190 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 SKAP1Q86WV1 359 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 SELENOSQ9BQE4 189 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 SELENOOQ9BVL4 669 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 RIOK3O14730 519 aaKnown RBP19.65■□□□□ 0.74
COL27A1-201ENST00000356083 CCDC114Q96M63 670 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 TTLL3Q9Y4R7 772 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 CCDC14Q49A88 953 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 FAM114A1Q8IWE2 563 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 CDC5LQ99459 802 aaKnown RBP19.65■□□□□ 0.74
COL27A1-201ENST00000356083 NBPF6Q5VWK0 638 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 NBPF5PQ86XG9 351 aaPredicted RBP19.65■□□□□ 0.74
COL27A1-201ENST00000356083 NBPF4Q96M43 638 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 PPME1Q9Y570 386 aa19.65■□□□□ 0.74
COL27A1-201ENST00000356083 RTEL1-TNFRSF6BF6WH68 1400 aa19.64■□□□□ 0.73
COL27A1-201ENST00000356083 DYNC1I1O14576 645 aa19.64■□□□□ 0.73
COL27A1-201ENST00000356083 IFIT1BQ5T764 474 aaKnown RBP19.64■□□□□ 0.73
COL27A1-201ENST00000356083 SPAG5Q96R06 1193 aa19.64■□□□□ 0.73
COL27A1-201ENST00000356083 KIFC2Q96AC6 838 aa19.64■□□□□ 0.73
COL27A1-201ENST00000356083 KRT9P35527 623 aa19.64■□□□□ 0.73
COL27A1-201ENST00000356083 RAPGEF3O95398 923 aa19.63■□□□□ 0.73
COL27A1-201ENST00000356083 CCDC172P0C7W6 258 aa19.63■□□□□ 0.73
COL27A1-201ENST00000356083 MNAT1P51948 309 aa19.63■□□□□ 0.73
COL27A1-201ENST00000356083 MRRFQ96E11 262 aaKnown RBP19.63■□□□□ 0.73
COL27A1-201ENST00000356083 TAF7Q15545 349 aaPredicted RBP19.63■□□□□ 0.73
COL27A1-201ENST00000356083 HDAC9Q9UKV0 1011 aa19.63■□□□□ 0.73
COL27A1-201ENST00000356083 AFG3L2Q9Y4W6 797 aa19.63■□□□□ 0.73
COL27A1-201ENST00000356083 FAM160A1Q05DH4 1040 aa19.63■□□□□ 0.73
COL27A1-201ENST00000356083 GLRX3O76003 335 aaKnown RBP19.63■□□□□ 0.73
COL27A1-201ENST00000356083 AAMPQ13685 434 aa19.63■□□□□ 0.73
COL27A1-201ENST00000356083 DIXDC1Q155Q3 683 aa19.63■□□□□ 0.73
COL27A1-201ENST00000356083 KIF5AQ12840 1032 aa19.62■□□□□ 0.73
COL27A1-201ENST00000356083 PKD2L1Q9P0L9 805 aa19.62■□□□□ 0.73
COL27A1-201ENST00000356083 AGTPBP1Q9UPW5 1226 aa19.62■□□□□ 0.73
COL27A1-201ENST00000356083 METAP2P50579 478 aaKnown RBP eCLIP19.62■□□□□ 0.73
COL27A1-201ENST00000356083 F6X3S4 739 aa19.62■□□□□ 0.73
COL27A1-201ENST00000356083 TBC1D31Q96DN5 1066 aa19.62■□□□□ 0.73
COL27A1-201ENST00000356083 USP16Q9Y5T5 823 aa19.62■□□□□ 0.73
COL27A1-201ENST00000356083 AK9Q5TCS8 1911 aa19.62■□□□□ 0.73
COL27A1-201ENST00000356083 PPP2R1AP30153 589 aa19.62■□□□□ 0.73
COL27A1-201ENST00000356083 CCDC183Q5T5S1 534 aa19.62■□□□□ 0.73
COL27A1-201ENST00000356083 NBPF1Q3BBV0 1214 aa19.62■□□□□ 0.73
COL27A1-201ENST00000356083 KRT5P13647 590 aa19.62■□□□□ 0.73
COL27A1-201ENST00000356083 AKR1B10O60218 316 aa19.61■□□□□ 0.73
COL27A1-201ENST00000356083 KCNK9Q9NPC2 374 aa19.61■□□□□ 0.73
COL27A1-201ENST00000356083 TRIM7Q9C029 511 aa19.61■□□□□ 0.73
COL27A1-201ENST00000356083 CGNQ9P2M7 1197 aaKnown RBP19.61■□□□□ 0.73
COL27A1-201ENST00000356083 BACH1O14867 736 aa19.61■□□□□ 0.73
COL27A1-201ENST00000356083 JAG2Q9Y219 1238 aa19.61■□□□□ 0.73
COL27A1-201ENST00000356083 N4BP3O15049 544 aa19.61■□□□□ 0.73
COL27A1-201ENST00000356083 GSDMBQ8TAX9 411 aa19.61■□□□□ 0.73
COL27A1-201ENST00000356083 FOXO3O43524 673 aa19.61■□□□□ 0.73
COL27A1-201ENST00000356083 IARSP41252 1262 aaKnown RBP19.61■□□□□ 0.73
COL27A1-201ENST00000356083 FEZ2Q9UHY8 353 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-201ENST00000356083 RIMBP2O15034 1052 aa19.6■□□□□ 0.73
COL27A1-201ENST00000356083 DAPK3O43293 454 aa19.6■□□□□ 0.73
COL27A1-201ENST00000356083 HSPA4P34932 840 aa19.6■□□□□ 0.73
COL27A1-201ENST00000356083 E7EVH7 732 aa19.6■□□□□ 0.73
COL27A1-201ENST00000356083 LMOD1P29536 600 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-201ENST00000356083 PPP4R4Q6NUP7 873 aa19.6■□□□□ 0.73
COL27A1-201ENST00000356083 USP37Q86T82 979 aa19.6■□□□□ 0.73
COL27A1-201ENST00000356083 PPP1R12AO14974 1030 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-201ENST00000356083 TMEM57Q8N5G2 664 aa19.6■□□□□ 0.73
COL27A1-201ENST00000356083 ATRIPQ8WXE1 791 aa19.6■□□□□ 0.73
COL27A1-201ENST00000356083 ERMNQ8TAM6 284 aa19.6■□□□□ 0.73
COL27A1-201ENST00000356083 TRIM6Q9C030 488 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-201ENST00000356083 SETDB2Q96T68 719 aa19.6■□□□□ 0.73
COL27A1-201ENST00000356083 CCDC7Q96M83 1385 aa19.6■□□□□ 0.73
COL27A1-201ENST00000356083 MVPQ14764 893 aaKnown RBP19.59■□□□□ 0.73
COL27A1-201ENST00000356083 TACC3Q9Y6A5 838 aa19.59■□□□□ 0.73
COL27A1-201ENST00000356083 DNAJC21Q5F1R6 531 aaKnown RBP19.59■□□□□ 0.73
COL27A1-201ENST00000356083 SPDYE3A6NKU9 549 aa19.59■□□□□ 0.73
COL27A1-201ENST00000356083 GPHNQ9NQX3 736 aaPredicted RBP19.59■□□□□ 0.73
COL27A1-201ENST00000356083 ANKFY1Q9P2R3 1169 aa19.59■□□□□ 0.73
COL27A1-201ENST00000356083 SMARCC2Q8TAQ2 1214 aa19.59■□□□□ 0.73
COL27A1-201ENST00000356083 RASAL2Q9UJF2 1139 aa19.59■□□□□ 0.73
COL27A1-201ENST00000356083 HSPA1LP34931 641 aa19.59■□□□□ 0.73
COL27A1-201ENST00000356083 PPARDQ03181 441 aa19.59■□□□□ 0.73
COL27A1-201ENST00000356083 VPS52Q8N1B4 723 aa19.59■□□□□ 0.73
COL27A1-201ENST00000356083 MCM6Q14566 821 aa19.59■□□□□ 0.73
COL27A1-201ENST00000356083 CRNKL1Q9BZJ0 848 aaKnown RBP19.59■□□□□ 0.73
COL27A1-201ENST00000356083 ZBTB24O43167 697 aaPredicted RBP19.58■□□□□ 0.73
COL27A1-201ENST00000356083 ANO3Q9BYT9 981 aa19.58■□□□□ 0.73
COL27A1-201ENST00000356083 CACYBPQ9HB71 228 aaKnown RBP19.58■□□□□ 0.73
COL27A1-201ENST00000356083 GIPC1O14908 333 aa19.58■□□□□ 0.72
COL27A1-201ENST00000356083 LDHCP07864 332 aa19.58■□□□□ 0.72
COL27A1-201ENST00000356083 C6orf50Q9HD87 102 aa19.58■□□□□ 0.72
COL27A1-201ENST00000356083 HMGB1P09429 215 aaKnown RBP19.58■□□□□ 0.72
COL27A1-201ENST00000356083 ATP2A1O14983 1001 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms