RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 TRMT1Q9NXH9 659 aaKnown RBP8.97□□□□□ -0.97
CCR9-201ENST00000355983 SNX14Q9Y5W7 946 aa8.97□□□□□ -0.97
CCR9-201ENST00000355983 DLG5Q8TDM6 1919 aa8.97□□□□□ -0.97
CCR9-201ENST00000355983 SMC2O95347 1197 aa8.97□□□□□ -0.97
CCR9-201ENST00000355983 APOBRQ0VD83 1088 aa8.97□□□□□ -0.97
CCR9-201ENST00000355983 TRIM65Q6PJ69 517 aa8.97□□□□□ -0.97
CCR9-201ENST00000355983 LRRN4CLQ8ND94 238 aa8.97□□□□□ -0.97
CCR9-201ENST00000355983 TBC1D22AQ8WUA7 517 aa8.97□□□□□ -0.97
CCR9-201ENST00000355983 ZCCHC17Q9NP64 241 aaKnown RBP8.97□□□□□ -0.97
CCR9-201ENST00000355983 TOMM22Q9NS69 142 aa8.97□□□□□ -0.97
CCR9-201ENST00000355983 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.96□□□□□ -0.97
CCR9-201ENST00000355983 EVCP57679 992 aa8.96□□□□□ -0.97
CCR9-201ENST00000355983 ALDH8A1Q9H2A2 487 aaPredicted RBP8.96□□□□□ -0.97
CCR9-201ENST00000355983 ANO10Q9NW15 660 aa8.96□□□□□ -0.97
CCR9-201ENST00000355983 HYPKQ9NX55 129 aa8.96□□□□□ -0.97
CCR9-201ENST00000355983 PARP3Q9Y6F1 533 aa8.96□□□□□ -0.97
CCR9-201ENST00000355983 EVC2Q86UK5 1308 aa8.96□□□□□ -0.98
CCR9-201ENST00000355983 ATXN2Q99700 1313 aaKnown RBP8.96□□□□□ -0.98
CCR9-201ENST00000355983 GOLGA6L4A6NEF3 574 aa8.96□□□□□ -0.98
CCR9-201ENST00000355983 SEC31AO94979 1220 aaKnown RBP8.96□□□□□ -0.98
CCR9-201ENST00000355983 GNAI3P08754 354 aa8.96□□□□□ -0.98
CCR9-201ENST00000355983 MAP3K9P80192 1104 aa8.96□□□□□ -0.98
CCR9-201ENST00000355983 TUBB2AQ13885 445 aa8.96□□□□□ -0.98
CCR9-201ENST00000355983 ARID5BQ14865 1188 aa8.96□□□□□ -0.98
CCR9-201ENST00000355983 C11orf91Q3C1V1 193 aa8.96□□□□□ -0.98
CCR9-201ENST00000355983 C14orf37Q86TY3 774 aa8.96□□□□□ -0.98
CCR9-201ENST00000355983 CKAP2LQ8IYA6 745 aa8.96□□□□□ -0.98
CCR9-201ENST00000355983 TSPYL6Q8N831 410 aa8.96□□□□□ -0.98
CCR9-201ENST00000355983 FAM71BQ8TC56 605 aa8.96□□□□□ -0.98
CCR9-201ENST00000355983 TUBB2BQ9BVA1 445 aa8.96□□□□□ -0.98
CCR9-201ENST00000355983 ADGRF5Q8IZF2 1346 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 H3BQF6 201 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 LONRF2Q1L5Z9 754 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 DNAJC21Q5F1R6 531 aaKnown RBP8.95□□□□□ -0.98
CCR9-201ENST00000355983 HDXQ7Z353 690 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 NBPF11Q86T75 865 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 LEO1Q8WVC0 666 aaPredicted RBP8.95□□□□□ -0.98
CCR9-201ENST00000355983 NAT10Q9H0A0 1025 aaKnown RBP8.95□□□□□ -0.98
CCR9-201ENST00000355983 MBIPQ9NS73 344 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 RAB21Q9UL25 225 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 ABCC1P33527 1531 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 ARHGEF10O15013 1369 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 NPHP1O15259 732 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 ERCC3P19447 782 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 SFPQP23246 707 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCR9-201ENST00000355983 TXLNAP40222 546 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 DDR1Q08345 913 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 SF3B2Q13435 895 aaKnown RBP8.95□□□□□ -0.98
CCR9-201ENST00000355983 CAMK4Q16566 473 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 NOL8Q76FK4 1167 aaKnown RBP8.95□□□□□ -0.98
CCR9-201ENST00000355983 DHX40Q8IX18 779 aaKnown RBP8.95□□□□□ -0.98
CCR9-201ENST00000355983 DNAAF4Q8WXU2 420 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 SPATA32Q96LK8 384 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 BSDC1Q9NW68 430 aaPredicted RBP8.95□□□□□ -0.98
CCR9-201ENST00000355983 FBXO3Q9UK99 471 aa8.95□□□□□ -0.98
CCR9-201ENST00000355983 ABCC3O15438 1527 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 TMCO5BA8MYB1 307 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 SART3Q15020 963 aaKnown RBP8.94□□□□□ -0.98
CCR9-201ENST00000355983 LRRC31Q6UY01 552 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 GOLGA1Q92805 767 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 DDX11Q96FC9 970 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 LSG1Q9H089 658 aaKnown RBP8.94□□□□□ -0.98
CCR9-201ENST00000355983 C14orf93Q9H972 538 aaKnown RBP8.94□□□□□ -0.98
CCR9-201ENST00000355983 USP16Q9Y5T5 823 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 CD163L1Q9NR16 1453 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 LMTK2Q8IWU2 1503 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 BECN2A8MW95 431 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 ZSCAN12O43309 604 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 CEP57L1Q8IYX8 460 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 CARD6Q9BX69 1037 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 PARD6BQ9BYG5 372 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 LRRCC1Q9C099 1032 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 ACBD3Q9H3P7 528 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 ZSWIM6Q9HCJ5 1215 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 MRFAP1Q9Y605 127 aa8.94□□□□□ -0.98
CCR9-201ENST00000355983 MYO1BO43795 1136 aa8.93□□□□□ -0.98
CCR9-201ENST00000355983 ERLIN1O75477 346 aa8.93□□□□□ -0.98
CCR9-201ENST00000355983 ATL3Q6DD88 541 aa8.93□□□□□ -0.98
CCR9-201ENST00000355983 POTEDQ86YR6 584 aa8.93□□□□□ -0.98
CCR9-201ENST00000355983 JMYQ8N9B5 988 aa8.93□□□□□ -0.98
CCR9-201ENST00000355983 MSANTD4Q8NCY6 345 aa8.93□□□□□ -0.98
CCR9-201ENST00000355983 GBP3Q9H0R5 595 aa8.93□□□□□ -0.98
CCR9-201ENST00000355983 TRAK1Q9UPV9 953 aa8.93□□□□□ -0.98
CCR9-201ENST00000355983 NR1I2O75469 434 aa8.93□□□□□ -0.98
CCR9-201ENST00000355983 ARMCX5Q6P1M9 558 aa8.93□□□□□ -0.98
CCR9-201ENST00000355983 C11orf57Q6ZUT1 292 aaPredicted RBP8.93□□□□□ -0.98
CCR9-201ENST00000355983 ARAP3Q8WWN8 1544 aa8.93□□□□□ -0.98
CCR9-201ENST00000355983 RIMS2Q9UQ26 1411 aa8.93□□□□□ -0.98
CCR9-201ENST00000355983 ADCY9O60503 1353 aa8.92□□□□□ -0.98
CCR9-201ENST00000355983 MAP2K1Q02750 393 aaPredicted RBP8.92□□□□□ -0.98
CCR9-201ENST00000355983 BEND6Q5SZJ8 279 aaPredicted RBP8.92□□□□□ -0.98
CCR9-201ENST00000355983 LARP1BQ659C4 914 aaKnown RBP8.92□□□□□ -0.98
CCR9-201ENST00000355983 HOMER1Q86YM7 354 aa8.92□□□□□ -0.98
CCR9-201ENST00000355983 VIPAS39Q9H9C1 493 aa8.92□□□□□ -0.98
CCR9-201ENST00000355983 NEXMIFQ5QGS0 1516 aa8.92□□□□□ -0.98
CCR9-201ENST00000355983 ZFYVE16Q7Z3T8 1539 aa8.92□□□□□ -0.98
CCR9-201ENST00000355983 CCT4P50991 539 aaKnown RBP8.92□□□□□ -0.98
CCR9-201ENST00000355983 PPP2R3AQ06190 1150 aa8.92□□□□□ -0.98
CCR9-201ENST00000355983 LRCH2Q5VUJ6 765 aa8.92□□□□□ -0.98
CCR9-201ENST00000355983 MICALL1Q8N3F8 863 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms