RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 NBPF14Q5TI25 921 aa16.78■□□□□ 0.28
PGBD2-202ENST00000355360 NBPF10Q6P3W6 841 aaKnown RBP16.78■□□□□ 0.28
PGBD2-202ENST00000355360 NBPF15Q8N660 670 aa16.78■□□□□ 0.28
PGBD2-202ENST00000355360 SYAP1Q96A49 352 aaPredicted RBP16.78■□□□□ 0.28
PGBD2-202ENST00000355360 KAT6BQ8WYB5 2073 aa16.78■□□□□ 0.28
PGBD2-202ENST00000355360 FMNL2Q96PY5 1086 aa16.78■□□□□ 0.28
PGBD2-202ENST00000355360 NOL7Q9UMY1 257 aaKnown RBP16.78■□□□□ 0.28
PGBD2-202ENST00000355360 TAF5LO75529 589 aa16.77■□□□□ 0.28
PGBD2-202ENST00000355360 C17orf53Q8N3J3 647 aaPredicted RBP16.77■□□□□ 0.28
PGBD2-202ENST00000355360 CAMTA1Q9Y6Y1 1673 aa16.77■□□□□ 0.28
PGBD2-202ENST00000355360 OVOS2A0A0G2JMS6 1433 aa16.77■□□□□ 0.27
PGBD2-202ENST00000355360 UBE2HP62256 183 aa16.76■□□□□ 0.27
PGBD2-202ENST00000355360 CCDC183Q5T5S1 534 aa16.76■□□□□ 0.27
PGBD2-202ENST00000355360 TTC6Q86TZ1 520 aa16.76■□□□□ 0.27
PGBD2-202ENST00000355360 KCNB2Q92953 911 aa16.76■□□□□ 0.27
PGBD2-202ENST00000355360 DCAF5Q96JK2 942 aa16.76■□□□□ 0.27
PGBD2-202ENST00000355360 TM6SF1Q9BZW5 370 aa16.76■□□□□ 0.27
PGBD2-202ENST00000355360 MED23Q9ULK4 1368 aa16.76■□□□□ 0.27
PGBD2-202ENST00000355360 ALS2Q96Q42 1657 aa16.76■□□□□ 0.27
PGBD2-202ENST00000355360 ZNF609O15014 1411 aa16.76■□□□□ 0.27
PGBD2-202ENST00000355360 RPS6KB1P23443 525 aa16.75■□□□□ 0.27
PGBD2-202ENST00000355360 HDAC5Q9UQL6 1122 aa16.75■□□□□ 0.27
PGBD2-202ENST00000355360 ZKSCAN5Q9Y2L8 839 aa16.75■□□□□ 0.27
PGBD2-202ENST00000355360 ADAMTSL3P82987 1691 aa16.75■□□□□ 0.27
PGBD2-202ENST00000355360 LRRC24Q50LG9 513 aa16.75■□□□□ 0.27
PGBD2-202ENST00000355360 COPRSQ9NQ92 184 aa16.75■□□□□ 0.27
PGBD2-202ENST00000355360 MST1RQ04912 1400 aa16.75■□□□□ 0.27
PGBD2-202ENST00000355360 CHST3Q7LGC8 479 aa16.75■□□□□ 0.27
PGBD2-202ENST00000355360 TMEM87AQ8NBN3 555 aa16.75■□□□□ 0.27
PGBD2-202ENST00000355360 GOLIM4O00461 696 aa16.74■□□□□ 0.27
PGBD2-202ENST00000355360 LIG1P18858 919 aa16.74■□□□□ 0.27
PGBD2-202ENST00000355360 SH2B1Q9NRF2 756 aaPredicted RBP16.74■□□□□ 0.27
PGBD2-202ENST00000355360 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.74■□□□□ 0.27
PGBD2-202ENST00000355360 ADAMTS7Q9UKP4 1686 aa16.74■□□□□ 0.27
PGBD2-202ENST00000355360 AP5Z1O43299 807 aa16.74■□□□□ 0.27
PGBD2-202ENST00000355360 PUS3Q9BZE2 481 aaKnown RBP16.74■□□□□ 0.27
PGBD2-202ENST00000355360 TTC12Q9H892 705 aaPredicted RBP16.74■□□□□ 0.27
PGBD2-202ENST00000355360 CYP21A2P08686 494 aa16.73■□□□□ 0.27
PGBD2-202ENST00000355360 RBM10P98175 930 aaKnown RBP16.73■□□□□ 0.27
PGBD2-202ENST00000355360 CEBPZQ03701 1054 aaKnown RBP16.73■□□□□ 0.27
PGBD2-202ENST00000355360 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
PGBD2-202ENST00000355360 ZSCAN31Q96LW9 406 aaPredicted RBP16.73■□□□□ 0.27
PGBD2-202ENST00000355360 OFD1O75665 1012 aa16.73■□□□□ 0.27
PGBD2-202ENST00000355360 HSP90B1P14625 803 aaKnown RBP16.73■□□□□ 0.27
PGBD2-202ENST00000355360 HSP90AB3PQ58FF7 597 aa16.73■□□□□ 0.27
PGBD2-202ENST00000355360 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
PGBD2-202ENST00000355360 ADCY5O95622 1261 aa16.72■□□□□ 0.27
PGBD2-202ENST00000355360 ATP5JP18859 108 aa16.72■□□□□ 0.27
PGBD2-202ENST00000355360 CASP7P55210 303 aa16.72■□□□□ 0.27
PGBD2-202ENST00000355360 Q6ZUG5 572 aa16.72■□□□□ 0.27
PGBD2-202ENST00000355360 STOX1Q6ZVD7 989 aa16.72■□□□□ 0.27
PGBD2-202ENST00000355360 CKAP2LQ8IYA6 745 aa16.72■□□□□ 0.27
PGBD2-202ENST00000355360 SNRKQ9NRH2 765 aa16.72■□□□□ 0.27
PGBD2-202ENST00000355360 STRN4Q9NRL3 753 aa16.72■□□□□ 0.27
PGBD2-202ENST00000355360 STRCP1A6NGW2 1772 aa16.72■□□□□ 0.27
PGBD2-202ENST00000355360 ARFGEF2Q9Y6D5 1785 aa16.72■□□□□ 0.27
PGBD2-202ENST00000355360 HIP1O00291 1037 aa16.72■□□□□ 0.27
PGBD2-202ENST00000355360 RNF20Q5VTR2 975 aa16.72■□□□□ 0.27
PGBD2-202ENST00000355360 PHF14O94880 888 aa16.71■□□□□ 0.27
PGBD2-202ENST00000355360 PSMA5P28066 241 aa16.71■□□□□ 0.27
PGBD2-202ENST00000355360 FOXO4P98177 505 aa16.71■□□□□ 0.27
PGBD2-202ENST00000355360 BRF1Q92994 677 aa16.71■□□□□ 0.27
PGBD2-202ENST00000355360 COL18A1P39060 1754 aa16.71■□□□□ 0.27
PGBD2-202ENST00000355360 TAOK2Q9UL54 1235 aa16.71■□□□□ 0.27
PGBD2-202ENST00000355360 RABL6Q3YEC7 729 aaPredicted RBP16.71■□□□□ 0.26
PGBD2-202ENST00000355360 FTOQ9C0B1 505 aaKnown RBP eCLIP16.71■□□□□ 0.26
PGBD2-202ENST00000355360 PRDM11Q9NQV5 511 aa16.71■□□□□ 0.26
PGBD2-202ENST00000355360 ATP6V1DQ9Y5K8 247 aa16.71■□□□□ 0.26
PGBD2-202ENST00000355360 ATG9AQ7Z3C6 839 aa16.7■□□□□ 0.26
PGBD2-202ENST00000355360 SYNE4Q8N205 404 aa16.7■□□□□ 0.26
PGBD2-202ENST00000355360 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
PGBD2-202ENST00000355360 ARID3AQ99856 593 aa16.7■□□□□ 0.26
PGBD2-202ENST00000355360 CCDC39Q9UFE4 941 aa16.7■□□□□ 0.26
PGBD2-202ENST00000355360 CCT2P78371 535 aaKnown RBP16.7■□□□□ 0.26
PGBD2-202ENST00000355360 FGD1P98174 961 aa16.7■□□□□ 0.26
PGBD2-202ENST00000355360 SPC24Q8NBT2 197 aa16.7■□□□□ 0.26
PGBD2-202ENST00000355360 NEK1Q96PY6 1258 aa16.7■□□□□ 0.26
PGBD2-202ENST00000355360 TTLL5Q6EMB2 1281 aa16.69■□□□□ 0.26
PGBD2-202ENST00000355360 NCOA5Q9HCD5 579 aaKnown RBP16.69■□□□□ 0.26
PGBD2-202ENST00000355360 GUCY1B3Q02153 619 aa16.68■□□□□ 0.26
PGBD2-202ENST00000355360 KIF1AQ12756 1690 aa16.68■□□□□ 0.26
PGBD2-202ENST00000355360 ZNF500O60304 480 aaPredicted RBP16.68■□□□□ 0.26
PGBD2-202ENST00000355360 KRT85P78386 507 aa16.68■□□□□ 0.26
PGBD2-202ENST00000355360 APOBRQ0VD83 1088 aa16.68■□□□□ 0.26
PGBD2-202ENST00000355360 RAB11FIP4Q86YS3 637 aa16.68■□□□□ 0.26
PGBD2-202ENST00000355360 HAUS7Q99871 368 aa16.68■□□□□ 0.26
PGBD2-202ENST00000355360 FUCA2Q9BTY2 467 aa16.68■□□□□ 0.26
PGBD2-202ENST00000355360 GPHNQ9NQX3 736 aaPredicted RBP16.68■□□□□ 0.26
PGBD2-202ENST00000355360 A0A087WWV3 80 aa16.67■□□□□ 0.26
PGBD2-202ENST00000355360 MCMDC2Q4G0Z9 681 aa16.67■□□□□ 0.26
PGBD2-202ENST00000355360 HS1BP3Q53T59 392 aa16.67■□□□□ 0.26
PGBD2-202ENST00000355360 DACT1Q9NYF0 836 aa16.67■□□□□ 0.26
PGBD2-202ENST00000355360 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.67■□□□□ 0.26
PGBD2-202ENST00000355360 SPATA31A3Q5VYP0 1347 aa16.67■□□□□ 0.26
PGBD2-202ENST00000355360 PI16Q6UXB8 463 aa16.67■□□□□ 0.26
PGBD2-202ENST00000355360 FKBP4Q02790 459 aaKnown RBP eCLIP16.67■□□□□ 0.26
PGBD2-202ENST00000355360 SCRN1Q12765 414 aa16.67■□□□□ 0.26
PGBD2-202ENST00000355360 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.67■□□□□ 0.26
PGBD2-202ENST00000355360 ZCRB1Q8TBF4 217 aaKnown RBP16.67■□□□□ 0.26
PGBD2-202ENST00000355360 PAG1Q9NWQ8 432 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms