RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 CDCA7Q9BWT1 371 aaPredicted RBP12.94□□□□□ -0.34
SND1-201ENST00000354725 HSP90AB1P08238 724 aaKnown RBP12.93□□□□□ -0.34
SND1-201ENST00000354725 SSFA2P28290 1259 aa12.93□□□□□ -0.34
SND1-201ENST00000354725 NOP2P46087 812 aaKnown RBP12.93□□□□□ -0.34
SND1-201ENST00000354725 EVA1CP58658 441 aa12.93□□□□□ -0.34
SND1-201ENST00000354725 PPP1R1BQ9UD71 204 aaPredicted RBP12.93□□□□□ -0.34
SND1-201ENST00000354725 CCDC172P0C7W6 258 aa12.93□□□□□ -0.34
SND1-201ENST00000354725 GET4Q7L5D6 327 aaPredicted RBP12.93□□□□□ -0.34
SND1-201ENST00000354725 SEPT12Q8IYM1 358 aa12.93□□□□□ -0.34
SND1-201ENST00000354725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.93□□□□□ -0.341e-7■■□□□ 11.6
SND1-201ENST00000354725 IL2RBP14784 551 aa12.92□□□□□ -0.34
SND1-201ENST00000354725 NKX1-1Q15270 411 aaPredicted RBP12.92□□□□□ -0.34
SND1-201ENST00000354725 KDM6AO15550 1401 aaPredicted RBP12.92□□□□□ -0.34
SND1-201ENST00000354725 PDLIM2Q96JY6 352 aa12.92□□□□□ -0.34
SND1-201ENST00000354725 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
SND1-201ENST00000354725 BCL2L12Q9HB09 334 aa12.91□□□□□ -0.34
SND1-201ENST00000354725 LMBRD1Q9NUN5 540 aa12.91□□□□□ -0.34
SND1-201ENST00000354725 ZDHHC9Q9Y397 364 aa12.91□□□□□ -0.34
SND1-201ENST00000354725 TAF1LQ8IZX4 1826 aa12.91□□□□□ -0.34
SND1-201ENST00000354725 NUP188Q5SRE5 1749 aa12.91□□□□□ -0.34
SND1-201ENST00000354725 LTV1Q96GA3 475 aaPredicted RBP12.91□□□□□ -0.34
SND1-201ENST00000354725 KIF4AO95239 1232 aa12.9□□□□□ -0.34
SND1-201ENST00000354725 CASC1Q6TDU7 716 aa12.9□□□□□ -0.34
SND1-201ENST00000354725 NBPF11Q86T75 865 aa12.9□□□□□ -0.34
SND1-201ENST00000354725 NLRP2Q9NX02 1062 aa12.9□□□□□ -0.34
SND1-201ENST00000354725 RSPH14Q9UHP6 348 aa12.9□□□□□ -0.34
SND1-201ENST00000354725 COL5A3P25940 1745 aaPredicted RBP12.9□□□□□ -0.34
SND1-201ENST00000354725 SDSP20132 328 aa12.9□□□□□ -0.34
SND1-201ENST00000354725 CCDC82Q8N4S0 544 aa12.9□□□□□ -0.34
SND1-201ENST00000354725 TRERF1Q96PN7 1200 aa12.9□□□□□ -0.34
SND1-201ENST00000354725 TERF2Q15554 542 aa12.9□□□□□ -0.34
SND1-201ENST00000354725 FAM177BA6PVY3 158 aa12.89□□□□□ -0.35
SND1-201ENST00000354725 CYP27B1O15528 508 aa12.89□□□□□ -0.35
SND1-201ENST00000354725 C16orf71Q8IYS4 520 aaPredicted RBP12.89□□□□□ -0.35
SND1-201ENST00000354725 OTUD7AQ8TE49 926 aaPredicted RBP12.89□□□□□ -0.35
SND1-201ENST00000354725 MARCH6O60337 910 aa12.89□□□□□ -0.35
SND1-201ENST00000354725 CSB-PGBD3P0DP91 1061 aa12.89□□□□□ -0.35
SND1-201ENST00000354725 CALR3Q96L12 384 aaKnown RBP12.89□□□□□ -0.35
SND1-201ENST00000354725 MAP2K1Q02750 393 aaPredicted RBP12.89□□□□□ -0.35
SND1-201ENST00000354725 TJP1Q07157 1748 aa12.88□□□□□ -0.35
SND1-201ENST00000354725 NUCB2P80303 420 aa12.88□□□□□ -0.35
SND1-201ENST00000354725 MFSD4BQ5TF39 518 aa12.88□□□□□ -0.35
SND1-201ENST00000354725 SULT6B1Q6IMI4 303 aa12.88□□□□□ -0.35
SND1-201ENST00000354725 QSER1Q2KHR3 1735 aa12.88□□□□□ -0.35
SND1-201ENST00000354725 CCDC97Q96F63 343 aaPredicted RBP12.88□□□□□ -0.35
SND1-201ENST00000354725 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
SND1-201ENST00000354725 ICE2Q659A1 982 aa12.87□□□□□ -0.35
SND1-201ENST00000354725 CTR9Q6PD62 1173 aa12.87□□□□□ -0.35
SND1-201ENST00000354725 CEMIPQ8WUJ3 1361 aa12.87□□□□□ -0.35
SND1-201ENST00000354725 CCDC96Q2M329 555 aa12.87□□□□□ -0.35
SND1-201ENST00000354725 ANKRD7Q92527 254 aa12.87□□□□□ -0.35
SND1-201ENST00000354725 PKP1Q13835 747 aa12.86□□□□□ -0.35
SND1-201ENST00000354725 ELL2O00472 640 aaPredicted RBP12.86□□□□□ -0.35
SND1-201ENST00000354725 KRT24Q2M2I5 525 aa12.86□□□□□ -0.35
SND1-201ENST00000354725 MEIS3Q99687 375 aa12.86□□□□□ -0.35
SND1-201ENST00000354725 CUL4AQ13619 759 aa12.86□□□□□ -0.35
SND1-201ENST00000354725 RAI14Q9P0K7 980 aa12.86□□□□□ -0.35
SND1-201ENST00000354725 PNMA2Q9UL42 364 aa12.86□□□□□ -0.35
SND1-201ENST00000354725 KCPQ6ZWJ8 1503 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 PHKG2P15735 406 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 PDE6BP35913 854 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 KRT27Q7Z3Y8 459 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 PCDH11XQ9BZA7 1347 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 PCDH11YQ9BZA8 1340 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 ERICH4A6NGS2 130 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 EPB41L2O43491 1005 aaKnown RBP12.85□□□□□ -0.35
SND1-201ENST00000354725 MTHFSDQ2M296 383 aaKnown RBP12.85□□□□□ -0.35
SND1-201ENST00000354725 ZCRB1Q8TBF4 217 aaKnown RBP12.85□□□□□ -0.35
SND1-201ENST00000354725 GPT2Q8TD30 523 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 TMX1Q9H3N1 280 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 C5P01031 1676 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 COL24A1Q17RW2 1714 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 GUCY2CP25092 1073 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 DDB1Q16531 1140 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 ZSCAN23Q3MJ62 389 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
SND1-201ENST00000354725 SOS1Q07889 1333 aaPredicted RBP12.84□□□□□ -0.35
SND1-201ENST00000354725 TCHHQ07283 1943 aa12.84□□□□□ -0.35
SND1-201ENST00000354725 KIAA2012Q0VF49 1180 aa12.84□□□□□ -0.35
SND1-201ENST00000354725 PROCA1Q8NCQ7 364 aaPredicted RBP12.84□□□□□ -0.35
SND1-201ENST00000354725 STAP2Q9UGK3 403 aa12.84□□□□□ -0.35
SND1-201ENST00000354725 TATP17735 454 aaPredicted RBP12.83□□□□□ -0.35
SND1-201ENST00000354725 DONSONQ9NYP3 566 aa12.83□□□□□ -0.35
SND1-201ENST00000354725 GOLGA6CA6NDK9 693 aa12.83□□□□□ -0.36
SND1-201ENST00000354725 GOLGA6BA6NDN3 693 aa12.83□□□□□ -0.36
SND1-201ENST00000354725 MPHOSPH10O00566 681 aaKnown RBP12.83□□□□□ -0.36
SND1-201ENST00000354725 GOLGA6DP0CG33 693 aa12.83□□□□□ -0.36
SND1-201ENST00000354725 PDE1AP54750 535 aa12.83□□□□□ -0.36
SND1-201ENST00000354725 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
SND1-201ENST00000354725 GOLGA6AQ9NYA3 693 aa12.83□□□□□ -0.36
SND1-201ENST00000354725 LAMB4A4D0S4 1761 aa12.83□□□□□ -0.36
SND1-201ENST00000354725 RAD51AP2Q09MP3 1159 aa12.83□□□□□ -0.36
SND1-201ENST00000354725 CCDC181Q5TID7 509 aa12.83□□□□□ -0.36
SND1-201ENST00000354725 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.36
SND1-201ENST00000354725 AOX1Q06278 1338 aa12.83□□□□□ -0.36
SND1-201ENST00000354725 EXOC5O00471 708 aa12.82□□□□□ -0.36
SND1-201ENST00000354725 MRVI1Q9Y6F6 885 aa12.82□□□□□ -0.36
SND1-201ENST00000354725 ERC2O15083 957 aa12.82□□□□□ -0.36
SND1-201ENST00000354725 SSR1P43307 286 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms