RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 GIGYF1O75420 1035 aaPredicted RBP16.04■□□□□ 0.16
SMC6-201ENST00000351948 TTLL7Q6ZT98 887 aa16.04■□□□□ 0.16
SMC6-201ENST00000351948 SPTY2D1Q68D10 685 aaPredicted RBP16.04■□□□□ 0.16
SMC6-201ENST00000351948 DBNDD2Q9BQY9 259 aa16.04■□□□□ 0.16
SMC6-201ENST00000351948 CRNKL1Q9BZJ0 848 aaKnown RBP16.04■□□□□ 0.16
SMC6-201ENST00000351948 PRAMEF22A3QJZ6 481 aa16.04■□□□□ 0.16
SMC6-201ENST00000351948 MRE11P49959 708 aa16.04■□□□□ 0.16
SMC6-201ENST00000351948 CATIPQ7Z7H3 387 aa16.04■□□□□ 0.16
SMC6-201ENST00000351948 ASAP1Q9ULH1 1129 aa16.04■□□□□ 0.16
SMC6-201ENST00000351948 USP6P35125 1406 aa16.04■□□□□ 0.16
SMC6-201ENST00000351948 MYOM2P54296 1465 aa16.03■□□□□ 0.16
SMC6-201ENST00000351948 OFD1O75665 1012 aa16.03■□□□□ 0.16
SMC6-201ENST00000351948 GJB2P29033 226 aa16.03■□□□□ 0.16
SMC6-201ENST00000351948 MCMDC2Q4G0Z9 681 aa16.03■□□□□ 0.16
SMC6-201ENST00000351948 MAGEB6Q8N7X4 407 aa16.03■□□□□ 0.16
SMC6-201ENST00000351948 SH2B1Q9NRF2 756 aaPredicted RBP16.03■□□□□ 0.16
SMC6-201ENST00000351948 R3HCC1Q9Y3T6 440 aaKnown RBP16.03■□□□□ 0.16
SMC6-201ENST00000351948 PAXIP1Q6ZW49 1069 aaPredicted RBP16.03■□□□□ 0.16
SMC6-201ENST00000351948 NCOA7Q8NI08 942 aa16.03■□□□□ 0.16
SMC6-201ENST00000351948 SMC5Q8IY18 1101 aa16.03■□□□□ 0.16
SMC6-201ENST00000351948 CCDC196A0A1B0GTZ2 297 aa16.03■□□□□ 0.16
SMC6-201ENST00000351948 A0A1B0GUL7 405 aa16.03■□□□□ 0.16
SMC6-201ENST00000351948 MSL1Q68DK7 614 aa16.03■□□□□ 0.16
SMC6-201ENST00000351948 PDE4BQ07343 736 aa16.02■□□□□ 0.16
SMC6-201ENST00000351948 CIZ1Q9ULV3 898 aaPredicted RBP16.02■□□□□ 0.16
SMC6-201ENST00000351948 SEC24BO95487 1268 aa16.02■□□□□ 0.16
SMC6-201ENST00000351948 GCKRQ14397 625 aa16.02■□□□□ 0.16
SMC6-201ENST00000351948 IBSPP21815 317 aaPredicted RBP16.02■□□□□ 0.15
SMC6-201ENST00000351948 KLF18A0A0U1RQI7 1052 aa16.02■□□□□ 0.15
SMC6-201ENST00000351948 CCDC192P0DO97 292 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 PROSER3Q2NL68 480 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 BRINP3Q76B58 766 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 CCDC191Q8NCU4 936 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 SLC26A6Q9BXS9 759 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 ORC3Q9UBD5 711 aaPredicted RBP16.01■□□□□ 0.15
SMC6-201ENST00000351948 SYCE3A1L190 88 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 EYA2O00167 538 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 NLRP5P59047 1200 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 NBPF14Q5TI25 921 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 PLEKHF1Q96S99 279 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 NUP62CLQ9H1M0 184 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 KIF1BO60333 1816 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 METAP2P50579 478 aaKnown RBP eCLIP16.01■□□□□ 0.15
SMC6-201ENST00000351948 SSRP1Q08945 709 aaKnown RBP16.01■□□□□ 0.15
SMC6-201ENST00000351948 CCDC129Q6ZRS4 1044 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 PANK2Q9BZ23 570 aa16.01■□□□□ 0.15
SMC6-201ENST00000351948 A2ML1A8K2U0 1454 aa16■□□□□ 0.15
SMC6-201ENST00000351948 SERPINC1P01008 464 aa16■□□□□ 0.15
SMC6-201ENST00000351948 HOXB7P09629 217 aa16■□□□□ 0.15
SMC6-201ENST00000351948 IARSP41252 1262 aaKnown RBP16■□□□□ 0.15
SMC6-201ENST00000351948 ZNF804AQ7Z570 1209 aa16■□□□□ 0.15
SMC6-201ENST00000351948 VEZTQ9HBM0 779 aa16■□□□□ 0.15
SMC6-201ENST00000351948 FAM135BQ49AJ0 1406 aa16■□□□□ 0.15
SMC6-201ENST00000351948 KAT14Q9H8E8 782 aa16■□□□□ 0.15
SMC6-201ENST00000351948 CPA1P15085 419 aa16■□□□□ 0.15
SMC6-201ENST00000351948 C8orf34Q49A92 452 aa16■□□□□ 0.15
SMC6-201ENST00000351948 KDM5CP41229 1560 aa16■□□□□ 0.15
SMC6-201ENST00000351948 HLA-DOAP06340 250 aa16■□□□□ 0.15
SMC6-201ENST00000351948 TMX3Q96JJ7 454 aa16■□□□□ 0.15
SMC6-201ENST00000351948 QTRT2Q9H974 415 aaKnown RBP16■□□□□ 0.15
SMC6-201ENST00000351948 BABAM1Q9NWV8 329 aa16■□□□□ 0.15
SMC6-201ENST00000351948 ZMYM4Q5VZL5 1548 aa15.99■□□□□ 0.15
SMC6-201ENST00000351948 ERVV-2B6SEH9 535 aa15.99■□□□□ 0.15
SMC6-201ENST00000351948 OGFOD1Q8N543 542 aa15.99■□□□□ 0.15
SMC6-201ENST00000351948 LETM1O95202 739 aaPredicted RBP15.99■□□□□ 0.15
SMC6-201ENST00000351948 ZFYP08048 801 aaPredicted RBP15.99■□□□□ 0.15
SMC6-201ENST00000351948 TNPO1Q92973 898 aaKnown RBP15.99■□□□□ 0.15
SMC6-201ENST00000351948 A0A0U1RQG5 324 aaPredicted RBP15.99■□□□□ 0.15
SMC6-201ENST00000351948 DTNBO60941 627 aa15.99■□□□□ 0.15
SMC6-201ENST00000351948 MCM5P33992 734 aa15.99■□□□□ 0.15
SMC6-201ENST00000351948 UFL1O94874 794 aa15.99■□□□□ 0.15
SMC6-201ENST00000351948 STK32BQ9NY57 414 aa15.99■□□□□ 0.15
SMC6-201ENST00000351948 MAGEC2Q9UBF1 373 aaPredicted RBP15.99■□□□□ 0.15
SMC6-201ENST00000351948 POLD1P28340 1107 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 MCM9Q9NXL9 1143 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 MAGEB6P1A0A0J9YX57 407 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 TSPY3P0CV98 308 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 TSPY8P0CW00 308 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 PRM3Q9NNZ6 103 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 ERBB3P21860 1342 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 PDE8AO60658 829 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 RXRAP19793 462 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 WTAPQ15007 396 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 TNNI3KQ59H18 835 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 TANGO6Q9C0B7 1094 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 BRPF3Q9ULD4 1205 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 FPGT-TNNI3KV9GXZ4 949 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 MAP3K4Q9Y6R4 1608 aa15.98■□□□□ 0.15
SMC6-201ENST00000351948 RNF113AO15541 343 aaKnown RBP15.98■□□□□ 0.15
SMC6-201ENST00000351948 ECM2O94769 699 aaPredicted RBP15.98■□□□□ 0.15
SMC6-201ENST00000351948 CCDC194A0A1B0GVG4 234 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 PARP10Q53GL7 1025 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 Q6ZUG5 572 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 CABP5Q9NP86 173 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 BLMP54132 1417 aaPredicted RBP15.97■□□□□ 0.15
SMC6-201ENST00000351948 HMGN5P82970 282 aaKnown RBP15.97■□□□□ 0.15
SMC6-201ENST00000351948 HMG20BQ9P0W2 317 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 TTC41PQ6P2S7 1318 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 STX6O43752 255 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 GSTO1P78417 241 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms