RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 UBE2Q2Q8WVN8 375 aa26.22■■□□□ 1.79
NKX2-4-201ENST00000351817 PKD1L3Q7Z443 1732 aa26.22■■□□□ 1.79
NKX2-4-201ENST00000351817 PTMAP06454 111 aaKnown RBP26.22■■□□□ 1.79
NKX2-4-201ENST00000351817 RPS6KB1P23443 525 aa26.22■■□□□ 1.79
NKX2-4-201ENST00000351817 TSGA10IPQ3SY00 556 aa26.22■■□□□ 1.79
NKX2-4-201ENST00000351817 ATP5JP18859 108 aa26.21■■□□□ 1.79
NKX2-4-201ENST00000351817 PDCP20941 246 aa26.21■■□□□ 1.79
NKX2-4-201ENST00000351817 RFX5P48382 616 aaPredicted RBP26.21■■□□□ 1.79
NKX2-4-201ENST00000351817 DCAF5Q96JK2 942 aa26.21■■□□□ 1.79
NKX2-4-201ENST00000351817 USP16Q9Y5T5 823 aa26.21■■□□□ 1.79
NKX2-4-201ENST00000351817 LARP1BQ659C4 914 aaKnown RBP26.2■■□□□ 1.79
NKX2-4-201ENST00000351817 FMNL2Q96PY5 1086 aa26.2■■□□□ 1.78
NKX2-4-201ENST00000351817 CYP27B1O15528 508 aa26.19■■□□□ 1.78
NKX2-4-201ENST00000351817 PTPN12Q05209 780 aaKnown RBP26.19■■□□□ 1.78
NKX2-4-201ENST00000351817 RABL6Q3YEC7 729 aaPredicted RBP26.19■■□□□ 1.78
NKX2-4-201ENST00000351817 TNNI3KQ59H18 835 aa26.19■■□□□ 1.78
NKX2-4-201ENST00000351817 ZNF589Q86UQ0 364 aaPredicted RBP26.19■■□□□ 1.78
NKX2-4-201ENST00000351817 FPGT-TNNI3KV9GXZ4 949 aa26.19■■□□□ 1.78
NKX2-4-201ENST00000351817 TPRNQ4KMQ1 711 aa26.19■■□□□ 1.78
NKX2-4-201ENST00000351817 RFX7Q2KHR2 1363 aa26.19■■□□□ 1.78
NKX2-4-201ENST00000351817 ARFGEF2Q9Y6D5 1785 aa26.18■■□□□ 1.78
NKX2-4-201ENST00000351817 TAF5LO75529 589 aa26.18■■□□□ 1.78
NKX2-4-201ENST00000351817 DBNLQ9UJU6 430 aaKnown RBP26.18■■□□□ 1.78
NKX2-4-201ENST00000351817 RRP9O43818 475 aaKnown RBP26.18■■□□□ 1.78
NKX2-4-201ENST00000351817 USPL1Q5W0Q7 1092 aa26.18■■□□□ 1.78
NKX2-4-201ENST00000351817 DTNBO60941 627 aa26.17■■□□□ 1.78
NKX2-4-201ENST00000351817 TFCP2Q12800 502 aa26.17■■□□□ 1.78
NKX2-4-201ENST00000351817 KRT32Q14532 448 aa26.17■■□□□ 1.78
NKX2-4-201ENST00000351817 HCLS1P14317 486 aaPredicted RBP26.16■■□□□ 1.78
NKX2-4-201ENST00000351817 UBE3BQ7Z3V4 1068 aa26.16■■□□□ 1.78
NKX2-4-201ENST00000351817 FUCA2Q9BTY2 467 aa26.16■■□□□ 1.78
NKX2-4-201ENST00000351817 KRT85P78386 507 aa26.16■■□□□ 1.78
NKX2-4-201ENST00000351817 COL9A3Q14050 684 aaPredicted RBP26.16■■□□□ 1.78
NKX2-4-201ENST00000351817 TOB2Q14106 344 aaPredicted RBP26.16■■□□□ 1.78
NKX2-4-201ENST00000351817 EDC3Q96F86 508 aaKnown RBP26.15■■□□□ 1.78
NKX2-4-201ENST00000351817 USP25Q9UHP3 1055 aa26.15■■□□□ 1.78
NKX2-4-201ENST00000351817 JARID2Q92833 1246 aaPredicted RBP26.15■■□□□ 1.78
NKX2-4-201ENST00000351817 PRDM11Q9NQV5 511 aa26.15■■□□□ 1.78
NKX2-4-201ENST00000351817 TAF6LQ9Y6J9 622 aa26.15■■□□□ 1.78
NKX2-4-201ENST00000351817 HSP90AA2PQ14568 343 aaPredicted RBP26.14■■□□□ 1.78
NKX2-4-201ENST00000351817 TCEANC2Q96MN5 208 aa26.14■■□□□ 1.78
NKX2-4-201ENST00000351817 R3HCC1Q9Y3T6 440 aaKnown RBP26.14■■□□□ 1.78
NKX2-4-201ENST00000351817 LAMB4A4D0S4 1761 aa26.14■■□□□ 1.78
NKX2-4-201ENST00000351817 ABCA3Q99758 1704 aa26.14■■□□□ 1.78
NKX2-4-201ENST00000351817 ELP1O95163 1332 aa26.14■■□□□ 1.77
NKX2-4-201ENST00000351817 PIP4K2AP48426 406 aaPredicted RBP26.14■■□□□ 1.77
NKX2-4-201ENST00000351817 GIMAP6Q6P9H5 292 aa26.14■■□□□ 1.77
NKX2-4-201ENST00000351817 CDC37L1Q7L3B6 337 aa26.14■■□□□ 1.77
NKX2-4-201ENST00000351817 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.14■■□□□ 1.77
NKX2-4-201ENST00000351817 A0A087WZG4 1122 aa26.13■■□□□ 1.77
NKX2-4-201ENST00000351817 PLBD2Q8NHP8 589 aa26.13■■□□□ 1.77
NKX2-4-201ENST00000351817 WDR17Q8IZU2 1322 aa26.13■■□□□ 1.77
NKX2-4-201ENST00000351817 CABP4P57796 275 aa26.12■■□□□ 1.77
NKX2-4-201ENST00000351817 ADCY5O95622 1261 aa26.12■■□□□ 1.77
NKX2-4-201ENST00000351817 CASP7P55210 303 aa26.11■■□□□ 1.77
NKX2-4-201ENST00000351817 KIAA2012Q0VF49 1180 aa26.11■■□□□ 1.77
NKX2-4-201ENST00000351817 TTC6Q86TZ1 520 aa26.11■■□□□ 1.77
NKX2-4-201ENST00000351817 HAUS7Q99871 368 aa26.11■■□□□ 1.77
NKX2-4-201ENST00000351817 U3KPZ7 1027 aaPredicted RBP26.11■■□□□ 1.77
NKX2-4-201ENST00000351817 COL5A2P05997 1499 aaPredicted RBP26.11■■□□□ 1.77
NKX2-4-201ENST00000351817 ATP5J2-PTCD1G3V325 749 aa26.11■■□□□ 1.77
NKX2-4-201ENST00000351817 PTCD1O75127 700 aaKnown RBP26.11■■□□□ 1.77
NKX2-4-201ENST00000351817 KDM4AO75164 1064 aa26.11■■□□□ 1.77
NKX2-4-201ENST00000351817 DBNDD2Q9BQY9 259 aa26.11■■□□□ 1.77
NKX2-4-201ENST00000351817 FERMT3Q86UX7 667 aa26.1■■□□□ 1.77
NKX2-4-201ENST00000351817 NEK1Q96PY6 1258 aa26.1■■□□□ 1.77
NKX2-4-201ENST00000351817 ZNF609O15014 1411 aa26.1■■□□□ 1.77
NKX2-4-201ENST00000351817 PARP4Q9UKK3 1724 aaKnown RBP26.09■■□□□ 1.77
NKX2-4-201ENST00000351817 GLI3P10071 1580 aa26.09■■□□□ 1.77
NKX2-4-201ENST00000351817 DNAJC2Q99543 621 aaKnown RBP26.09■■□□□ 1.77
NKX2-4-201ENST00000351817 MCMDC2Q4G0Z9 681 aa26.08■■□□□ 1.77
NKX2-4-201ENST00000351817 SCAND2PQ9GZW5 306 aaPredicted RBP26.08■■□□□ 1.77
NKX2-4-201ENST00000351817 NHSL1Q5SYE7 1610 aa26.08■■□□□ 1.77
NKX2-4-201ENST00000351817 CCDC192P0DO97 292 aa26.07■■□□□ 1.76
NKX2-4-201ENST00000351817 TOM1L2Q6ZVM7 507 aa26.07■■□□□ 1.76
NKX2-4-201ENST00000351817 STK3Q13188 491 aa26.07■■□□□ 1.76
NKX2-4-201ENST00000351817 LMBR1LQ6UX01 489 aa26.07■■□□□ 1.76
NKX2-4-201ENST00000351817 GTF3C6Q969F1 213 aa26.07■■□□□ 1.76
NKX2-4-201ENST00000351817 NDUFB9Q9Y6M9 179 aa26.06■■□□□ 1.76
NKX2-4-201ENST00000351817 H7C1W4 665 aa26.06■■□□□ 1.76
NKX2-4-201ENST00000351817 KBTBD3Q8NAB2 608 aa26.06■■□□□ 1.76
NKX2-4-201ENST00000351817 FAM173BQ6P4H8 233 aa26.05■■□□□ 1.76
NKX2-4-201ENST00000351817 CCDC129Q6ZRS4 1044 aa26.05■■□□□ 1.76
NKX2-4-201ENST00000351817 SH3TC1Q8TE82 1336 aa26.05■■□□□ 1.76
NKX2-4-201ENST00000351817 FOXO4P98177 505 aa26.04■■□□□ 1.76
NKX2-4-201ENST00000351817 NUP62CLQ9H1M0 184 aa26.04■■□□□ 1.76
NKX2-4-201ENST00000351817 DDX46Q7L014 1031 aaKnown RBP26.04■■□□□ 1.76
NKX2-4-201ENST00000351817 SPATA32Q96LK8 384 aa26.04■■□□□ 1.76
NKX2-4-201ENST00000351817 SEC62Q99442 399 aaKnown RBP26.04■■□□□ 1.76
NKX2-4-201ENST00000351817 CYP21A2P08686 494 aa26.03■■□□□ 1.76
NKX2-4-201ENST00000351817 MAP3K11Q16584 847 aa26.03■■□□□ 1.76
NKX2-4-201ENST00000351817 Q6ZUG5 572 aa26.03■■□□□ 1.76
NKX2-4-201ENST00000351817 TICAM2Q86XR7 235 aa26.03■■□□□ 1.76
NKX2-4-201ENST00000351817 GPR108Q9NPR9 543 aa26.03■■□□□ 1.76
NKX2-4-201ENST00000351817 PALLDQ8WX93 1383 aa26.03■■□□□ 1.76
NKX2-4-201ENST00000351817 ZCRB1Q8TBF4 217 aaKnown RBP26.03■■□□□ 1.76
NKX2-4-201ENST00000351817 GOLGA6L4A6NEF3 574 aa26.02■■□□□ 1.76
NKX2-4-201ENST00000351817 LIG1P18858 919 aa26.02■■□□□ 1.76
NKX2-4-201ENST00000351817 SASS6Q6UVJ0 657 aa26.02■■□□□ 1.76
NKX2-4-201ENST00000351817 CHMP3Q9Y3E7 222 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms