RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 MED23Q9ULK4 1368 aa24.51■■□□□ 1.51
CHRNA3-202ENST00000348639 ZBTB38Q8NAP3 1195 aaPredicted RBP24.51■■□□□ 1.51
CHRNA3-202ENST00000348639 GZF1Q9H116 711 aaPredicted RBP24.51■■□□□ 1.51
CHRNA3-202ENST00000348639 RBM8AQ9Y5S9 174 aaKnown RBP24.51■■□□□ 1.51
CHRNA3-202ENST00000348639 EDC3Q96F86 508 aaKnown RBP24.5■■□□□ 1.51
CHRNA3-202ENST00000348639 FAM89AQ96GI7 184 aa24.5■■□□□ 1.51
CHRNA3-202ENST00000348639 HLFQ16534 295 aa24.49■■□□□ 1.51
CHRNA3-202ENST00000348639 MARCH10Q8NA82 808 aaPredicted RBP24.49■■□□□ 1.51
CHRNA3-202ENST00000348639 ZNF594Q96JF6 807 aaPredicted RBP24.49■■□□□ 1.51
CHRNA3-202ENST00000348639 ZKSCAN1P17029 563 aaPredicted RBP24.49■■□□□ 1.51
CHRNA3-202ENST00000348639 CASTP20810 708 aaKnown RBP24.49■■□□□ 1.51
CHRNA3-202ENST00000348639 LRRC24Q50LG9 513 aa24.49■■□□□ 1.51
CHRNA3-202ENST00000348639 HSP90AB3PQ58FF7 597 aa24.49■■□□□ 1.51
CHRNA3-202ENST00000348639 FBXO3Q9UK99 471 aa24.49■■□□□ 1.51
CHRNA3-202ENST00000348639 GPTP24298 496 aa24.48■■□□□ 1.51
CHRNA3-202ENST00000348639 AK2P54819 239 aa24.48■■□□□ 1.51
CHRNA3-202ENST00000348639 CCDC57Q2TAC2 916 aa24.48■■□□□ 1.51
CHRNA3-202ENST00000348639 ZSWIM6Q9HCJ5 1215 aa24.48■■□□□ 1.51
CHRNA3-202ENST00000348639 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.48■■□□□ 1.51
CHRNA3-202ENST00000348639 JCADQ9P266 1359 aa24.47■■□□□ 1.51
CHRNA3-202ENST00000348639 CREB3L3Q68CJ9 461 aa24.47■■□□□ 1.51
CHRNA3-202ENST00000348639 CSF1RP07333 972 aa24.47■■□□□ 1.51
CHRNA3-202ENST00000348639 KCNJ4P48050 445 aa24.47■■□□□ 1.51
CHRNA3-202ENST00000348639 JAKMIP1Q96N16 626 aaKnown RBP24.47■■□□□ 1.51
CHRNA3-202ENST00000348639 NEUROD6Q96NK8 337 aa24.47■■□□□ 1.51
CHRNA3-202ENST00000348639 DNAJC2Q99543 621 aaKnown RBP24.47■■□□□ 1.51
CHRNA3-202ENST00000348639 LIMCH1Q9UPQ0 1083 aa24.47■■□□□ 1.51
CHRNA3-202ENST00000348639 ADCK5Q3MIX3 580 aa24.46■■□□□ 1.51
CHRNA3-202ENST00000348639 VPS53Q5VIR6 699 aa24.46■■□□□ 1.51
CHRNA3-202ENST00000348639 CCDC85AQ96PX6 553 aaPredicted RBP24.46■■□□□ 1.51
CHRNA3-202ENST00000348639 ZNF609O15014 1411 aa24.46■■□□□ 1.51
CHRNA3-202ENST00000348639 CDHR2Q9BYE9 1310 aa24.46■■□□□ 1.51
CHRNA3-202ENST00000348639 TIMM10P62072 90 aa24.45■■□□□ 1.51
CHRNA3-202ENST00000348639 L1TD1Q5T7N2 865 aaKnown RBP24.45■■□□□ 1.51
CHRNA3-202ENST00000348639 RUFY3Q7L099 469 aa24.45■■□□□ 1.51
CHRNA3-202ENST00000348639 NLRP10Q86W26 655 aa24.45■■□□□ 1.51
CHRNA3-202ENST00000348639 SLIT2O94813 1529 aa24.45■■□□□ 1.5
CHRNA3-202ENST00000348639 IL6STP40189 918 aaPredicted RBP24.45■■□□□ 1.5
CHRNA3-202ENST00000348639 ZNF589Q86UQ0 364 aaPredicted RBP24.45■■□□□ 1.5
CHRNA3-202ENST00000348639 TICAM2Q86XR7 235 aa24.45■■□□□ 1.5
CHRNA3-202ENST00000348639 PUS3Q9BZE2 481 aaKnown RBP24.45■■□□□ 1.5
CHRNA3-202ENST00000348639 TBC1D2BQ9UPU7 963 aa24.45■■□□□ 1.5
CHRNA3-202ENST00000348639 CYP46A1Q9Y6A2 500 aa24.45■■□□□ 1.5
CHRNA3-202ENST00000348639 FSD2A1L4K1 749 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 SLC27A2O14975 620 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 BRD1O95696 1058 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 RNF20Q5VTR2 975 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 MCTP1Q6DN14 999 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 BARGINQ6ZT62 677 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 C8orf37Q96NL8 207 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 NDUFB9Q9Y6M9 179 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 ERVV-1B6SEH8 477 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 TAF5LO75529 589 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 DZIP3Q86Y13 1208 aaKnown RBP24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 SYNE4Q8N205 404 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 KBTBD3Q8NAB2 608 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 PDRG1Q9NUG6 133 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 CEP126Q9P2H0 1117 aa24.44■■□□□ 1.5
CHRNA3-202ENST00000348639 NWD2Q9ULI1 1742 aa24.43■■□□□ 1.5
CHRNA3-202ENST00000348639 ATP6V1AP38606 617 aa24.43■■□□□ 1.5
CHRNA3-202ENST00000348639 A0A1B0GUL7 405 aa24.42■■□□□ 1.5
CHRNA3-202ENST00000348639 GOLGA6L3A6NEY3 463 aa24.42■■□□□ 1.5
CHRNA3-202ENST00000348639 CPA1P15085 419 aa24.42■■□□□ 1.5
CHRNA3-202ENST00000348639 NGLY1Q96IV0 654 aa24.42■■□□□ 1.5
CHRNA3-202ENST00000348639 RPAP1Q9BWH6 1393 aaPredicted RBP24.42■■□□□ 1.5
CHRNA3-202ENST00000348639 PSMA5P28066 241 aa24.42■■□□□ 1.5
CHRNA3-202ENST00000348639 IFIT5Q13325 482 aaKnown RBP24.42■■□□□ 1.5
CHRNA3-202ENST00000348639 FAM98CQ17RN3 349 aaKnown RBP24.42■■□□□ 1.5
CHRNA3-202ENST00000348639 DDX46Q7L014 1031 aaKnown RBP24.42■■□□□ 1.5
CHRNA3-202ENST00000348639 HMG20BQ9P0W2 317 aa24.42■■□□□ 1.5
CHRNA3-202ENST00000348639 PALLDQ8WX93 1383 aa24.42■■□□□ 1.5
CHRNA3-202ENST00000348639 KLHL40Q2TBA0 621 aa24.41■■□□□ 1.5
CHRNA3-202ENST00000348639 USPL1Q5W0Q7 1092 aa24.41■■□□□ 1.5
CHRNA3-202ENST00000348639 PAG1Q9NWQ8 432 aa24.41■■□□□ 1.5
CHRNA3-202ENST00000348639 TSGA10IPQ3SY00 556 aa24.4■■□□□ 1.5
CHRNA3-202ENST00000348639 MCMDC2Q4G0Z9 681 aa24.4■■□□□ 1.5
CHRNA3-202ENST00000348639 AKAP2Q9Y2D5 859 aa24.4■■□□□ 1.5
CHRNA3-202ENST00000348639 ANKRD36CQ5JPF3 1778 aa24.4■■□□□ 1.5
CHRNA3-202ENST00000348639 TAF7LQ5H9L4 462 aa24.4■■□□□ 1.5
CHRNA3-202ENST00000348639 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.4■■□□□ 1.5
CHRNA3-202ENST00000348639 ZSCAN31Q96LW9 406 aaPredicted RBP24.4■■□□□ 1.5
CHRNA3-202ENST00000348639 LMBRD1Q9NUN5 540 aa24.4■■□□□ 1.5
CHRNA3-202ENST00000348639 LOC102724428A0A0B4J2F2 783 aa24.39■■□□□ 1.5
CHRNA3-202ENST00000348639 SIK1P57059 783 aa24.39■■□□□ 1.5
CHRNA3-202ENST00000348639 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.39■■□□□ 1.5
CHRNA3-202ENST00000348639 DDX49Q9Y6V7 483 aaKnown RBP24.39■■□□□ 1.5
CHRNA3-202ENST00000348639 SH3TC1Q8TE82 1336 aa24.39■■□□□ 1.49
CHRNA3-202ENST00000348639 SH2B1Q9NRF2 756 aaPredicted RBP24.39■■□□□ 1.49
CHRNA3-202ENST00000348639 TRMT112Q9UI30 125 aaKnown RBP24.39■■□□□ 1.49
CHRNA3-202ENST00000348639 ISY1Q9ULR0 285 aaKnown RBP24.39■■□□□ 1.49
CHRNA3-202ENST00000348639 GOLIM4O00461 696 aa24.38■■□□□ 1.49
CHRNA3-202ENST00000348639 CRKLP46109 303 aaKnown RBP24.38■■□□□ 1.49
CHRNA3-202ENST00000348639 TTLL11Q8NHH1 800 aa24.38■■□□□ 1.49
CHRNA3-202ENST00000348639 CCDC87Q9NVE4 849 aa24.38■■□□□ 1.49
CHRNA3-202ENST00000348639 KCNQ2O43526 872 aa24.37■■□□□ 1.49
CHRNA3-202ENST00000348639 IFIT1P09914 478 aaKnown RBP24.37■■□□□ 1.49
CHRNA3-202ENST00000348639 CTSWP56202 376 aa24.37■■□□□ 1.49
CHRNA3-202ENST00000348639 INTS5Q6P9B9 1019 aaKnown RBP24.37■■□□□ 1.49
CHRNA3-202ENST00000348639 LARP6Q9BRS8 491 aaKnown RBP24.37■■□□□ 1.49
CHRNA3-202ENST00000348639 EIF5P55010 431 aaKnown RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms