RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 SPA17Q15506 151 aa21.48■■□□□ 1.03
UBE3C-201ENST00000348165 PRDM10Q9NQV6 1147 aa21.48■■□□□ 1.03
UBE3C-201ENST00000348165 TBX22Q9Y458 520 aa21.48■■□□□ 1.03
UBE3C-201ENST00000348165 WWC3Q9ULE0 1092 aa21.48■■□□□ 1.03
UBE3C-201ENST00000348165 NAA16Q6N069 864 aaPredicted RBP21.48■■□□□ 1.03
UBE3C-201ENST00000348165 CLIP2Q9UDT6 1046 aa21.48■■□□□ 1.03
UBE3C-201ENST00000348165 ZBTB43O43298 467 aa21.47■■□□□ 1.03
UBE3C-201ENST00000348165 FAM193AP78312 1265 aa21.47■■□□□ 1.03
UBE3C-201ENST00000348165 LIG1P18858 919 aa21.47■■□□□ 1.03
UBE3C-201ENST00000348165 IP6K1Q92551 441 aa21.47■■□□□ 1.03
UBE3C-201ENST00000348165 MAP3K5Q99683 1374 aa21.47■■□□□ 1.03
UBE3C-201ENST00000348165 CEP85Q6P2H3 762 aa21.47■■□□□ 1.03
UBE3C-201ENST00000348165 MYCNP04198 464 aaPredicted RBP21.46■■□□□ 1.03
UBE3C-201ENST00000348165 PPP4R3AQ6IN85 833 aa21.46■■□□□ 1.03
UBE3C-201ENST00000348165 TSPYL1Q9H0U9 437 aa21.46■■□□□ 1.03
UBE3C-201ENST00000348165 RBM27Q9P2N5 1060 aaKnown RBP21.46■■□□□ 1.03
UBE3C-201ENST00000348165 WDHD1O75717 1129 aaPredicted RBP21.46■■□□□ 1.03
UBE3C-201ENST00000348165 GSTO1P78417 241 aa21.46■■□□□ 1.03
UBE3C-201ENST00000348165 PTPN14Q15678 1187 aa21.46■■□□□ 1.03
UBE3C-201ENST00000348165 CCDC191Q8NCU4 936 aa21.46■■□□□ 1.03
UBE3C-201ENST00000348165 UBXN4Q92575 508 aa21.46■■□□□ 1.03
UBE3C-201ENST00000348165 ESR2Q92731 530 aa21.46■■□□□ 1.03
UBE3C-201ENST00000348165 CALML4Q96GE6 196 aa21.46■■□□□ 1.03
UBE3C-201ENST00000348165 IRS4O14654 1257 aaPredicted RBP21.46■■□□□ 1.03
UBE3C-201ENST00000348165 TSPY3P0CV98 308 aa21.46■■□□□ 1.03
UBE3C-201ENST00000348165 TSPY8P0CW00 308 aa21.46■■□□□ 1.03
UBE3C-201ENST00000348165 ABCC1P33527 1531 aa21.45■■□□□ 1.03
UBE3C-201ENST00000348165 RNMTO43148 476 aaKnown RBP21.45■■□□□ 1.03
UBE3C-201ENST00000348165 PAXIP1Q6ZW49 1069 aaPredicted RBP21.45■■□□□ 1.03
UBE3C-201ENST00000348165 ITSN2Q9NZM3 1697 aa21.45■■□□□ 1.02
UBE3C-201ENST00000348165 PAG1Q9NWQ8 432 aa21.45■■□□□ 1.02
UBE3C-201ENST00000348165 NSFL1CQ9UNZ2 370 aaKnown RBP21.45■■□□□ 1.02
UBE3C-201ENST00000348165 NMIQ13287 307 aaPredicted RBP21.45■■□□□ 1.02
UBE3C-201ENST00000348165 TPTE2Q6XPS3 522 aa21.45■■□□□ 1.02
UBE3C-201ENST00000348165 KRT23Q9C075 422 aa21.45■■□□□ 1.02
UBE3C-201ENST00000348165 ORAI2Q96SN7 254 aa21.45■■□□□ 1.02
UBE3C-201ENST00000348165 DCTPP1Q9H773 170 aa21.45■■□□□ 1.02
UBE3C-201ENST00000348165 PDCL2Q8N4E4 241 aa21.44■■□□□ 1.02
UBE3C-201ENST00000348165 PER1O15534 1290 aaPredicted RBP21.44■■□□□ 1.02
UBE3C-201ENST00000348165 ZNF165P49910 485 aa21.44■■□□□ 1.02
UBE3C-201ENST00000348165 BTG4Q9NY30 223 aa21.44■■□□□ 1.02
UBE3C-201ENST00000348165 YTHDC2Q9H6S0 1430 aaKnown RBP21.44■■□□□ 1.02
UBE3C-201ENST00000348165 IQCEQ6IPM2 695 aa21.44■■□□□ 1.02
UBE3C-201ENST00000348165 TAX1BP1Q86VP1 789 aa21.44■■□□□ 1.02
UBE3C-201ENST00000348165 PICALMQ13492 652 aa21.44■■□□□ 1.02
UBE3C-201ENST00000348165 SEPT7Q16181 437 aaKnown RBP21.44■■□□□ 1.02
UBE3C-201ENST00000348165 IFIT1BQ5T764 474 aaKnown RBP21.44■■□□□ 1.02
UBE3C-201ENST00000348165 NUP88Q99567 741 aaPredicted RBP21.44■■□□□ 1.02
UBE3C-201ENST00000348165 POTEJP0CG39 1038 aa21.43■■□□□ 1.02
UBE3C-201ENST00000348165 MTIF2P46199 727 aaKnown RBP21.43■■□□□ 1.02
UBE3C-201ENST00000348165 DNA2P51530 1060 aa21.43■■□□□ 1.02
UBE3C-201ENST00000348165 CCDC102BQ68D86 513 aa21.43■■□□□ 1.02
UBE3C-201ENST00000348165 ALG1Q9BT22 464 aa21.43■■□□□ 1.02
UBE3C-201ENST00000348165 EHMT1Q9H9B1 1298 aa21.43■■□□□ 1.02
UBE3C-201ENST00000348165 TCERG1LQ5VWI1 586 aa21.43■■□□□ 1.02
UBE3C-201ENST00000348165 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
UBE3C-201ENST00000348165 ANKRD62A6NC57 917 aa21.43■■□□□ 1.02
UBE3C-201ENST00000348165 KIF20AO95235 890 aa21.43■■□□□ 1.02
UBE3C-201ENST00000348165 Q6ZUG5 572 aa21.43■■□□□ 1.02
UBE3C-201ENST00000348165 SAMM50Q9Y512 469 aa21.43■■□□□ 1.02
UBE3C-201ENST00000348165 ZSCAN12O43309 604 aa21.43■■□□□ 1.02
UBE3C-201ENST00000348165 MYO1BO43795 1136 aa21.43■■□□□ 1.02
UBE3C-201ENST00000348165 FGFR1OPO95684 399 aaKnown RBP21.43■■□□□ 1.02
UBE3C-201ENST00000348165 TDRD12Q587J7 1177 aaKnown RBP21.43■■□□□ 1.02
UBE3C-201ENST00000348165 ZSCAN22P10073 491 aaPredicted RBP21.42■■□□□ 1.02
UBE3C-201ENST00000348165 SBNO2Q9Y2G9 1366 aa21.42■■□□□ 1.02
UBE3C-201ENST00000348165 UBE2HP62256 183 aa21.42■■□□□ 1.02
UBE3C-201ENST00000348165 TFCP2Q12800 502 aa21.42■■□□□ 1.02
UBE3C-201ENST00000348165 ZBTB40Q9NUA8 1239 aa21.42■■□□□ 1.02
UBE3C-201ENST00000348165 TRMT1Q9NXH9 659 aaKnown RBP21.42■■□□□ 1.02
UBE3C-201ENST00000348165 NBPF7P0C2Y1 421 aaPredicted RBP21.42■■□□□ 1.02
UBE3C-201ENST00000348165 DESP17661 470 aa21.42■■□□□ 1.02
UBE3C-201ENST00000348165 RBM25P49756 843 aaKnown RBP21.42■■□□□ 1.02
UBE3C-201ENST00000348165 G2E3Q7L622 706 aa21.42■■□□□ 1.02
UBE3C-201ENST00000348165 KIAA0556O60303 1618 aa21.42■■□□□ 1.02
UBE3C-201ENST00000348165 RTN1Q16799 776 aa21.42■■□□□ 1.02
UBE3C-201ENST00000348165 KIF4BQ2VIQ3 1234 aa21.42■■□□□ 1.02
UBE3C-201ENST00000348165 ZSCAN16Q9H4T2 348 aaPredicted RBP21.42■■□□□ 1.02
UBE3C-201ENST00000348165 URI1O94763 535 aaPredicted RBP21.41■■□□□ 1.02
UBE3C-201ENST00000348165 CHST3Q7LGC8 479 aa21.41■■□□□ 1.02
UBE3C-201ENST00000348165 ZGPATQ8N5A5 531 aaKnown RBP21.41■■□□□ 1.02
UBE3C-201ENST00000348165 CCDC148Q8NFR7 591 aa21.41■■□□□ 1.02
UBE3C-201ENST00000348165 TFCP2L1Q9NZI6 479 aa21.41■■□□□ 1.02
UBE3C-201ENST00000348165 ERICH4A6NGS2 130 aa21.41■■□□□ 1.02
UBE3C-201ENST00000348165 AMPD3Q01432 767 aa21.41■■□□□ 1.02
UBE3C-201ENST00000348165 MIGA1Q8NAN2 632 aa21.41■■□□□ 1.02
UBE3C-201ENST00000348165 VPS36Q86VN1 386 aa21.41■■□□□ 1.02
UBE3C-201ENST00000348165 TMTC2Q8N394 836 aa21.41■■□□□ 1.02
UBE3C-201ENST00000348165 CNNM2Q9H8M5 875 aa21.41■■□□□ 1.02
UBE3C-201ENST00000348165 STX1AQ16623 288 aa21.4■■□□□ 1.02
UBE3C-201ENST00000348165 JAKMIP3Q5VZ66 844 aa21.4■■□□□ 1.02
UBE3C-201ENST00000348165 GIMAP6Q6P9H5 292 aa21.4■■□□□ 1.02
UBE3C-201ENST00000348165 ZC3H12CQ9C0D7 883 aaKnown RBP21.4■■□□□ 1.02
UBE3C-201ENST00000348165 DDX21Q9NR30 783 aaKnown RBP eCLIP21.4■■□□□ 1.02
UBE3C-201ENST00000348165 EIF3JO75822 258 aaKnown RBP21.4■■□□□ 1.02
UBE3C-201ENST00000348165 CCDC40Q4G0X9 1142 aa21.4■■□□□ 1.02
UBE3C-201ENST00000348165 OGFOD1Q8N543 542 aa21.4■■□□□ 1.02
UBE3C-201ENST00000348165 JAG2Q9Y219 1238 aa21.4■■□□□ 1.02
UBE3C-201ENST00000348165 TCOF1Q13428 1488 aaKnown RBP21.4■■□□□ 1.02
UBE3C-201ENST00000348165 KIF5CO60282 957 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms