RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 FPGT-TNNI3KV9GXZ4 949 aa25.59■■□□□ 1.69
PTPN18-202ENST00000347849 A0A0G2JS52 829 aa25.59■■□□□ 1.69
PTPN18-202ENST00000347849 SYNE4Q8N205 404 aa25.59■■□□□ 1.69
PTPN18-202ENST00000347849 ACSBG1Q96GR2 724 aa25.59■■□□□ 1.69
PTPN18-202ENST00000347849 TEX13AQ9BXU3 409 aaPredicted RBP25.59■■□□□ 1.69
PTPN18-202ENST00000347849 UPF3BQ9BZI7 483 aaKnown RBP25.59■■□□□ 1.69
PTPN18-202ENST00000347849 ZBTB1Q9Y2K1 713 aa25.59■■□□□ 1.69
PTPN18-202ENST00000347849 HSPA4P34932 840 aa25.58■■□□□ 1.69
PTPN18-202ENST00000347849 RBM10P98175 930 aaKnown RBP25.58■■□□□ 1.69
PTPN18-202ENST00000347849 EVI5LQ96CN4 794 aa25.58■■□□□ 1.69
PTPN18-202ENST00000347849 DIAPH3Q9NSV4 1193 aa25.58■■□□□ 1.69
PTPN18-202ENST00000347849 ATG9AQ7Z3C6 839 aa25.57■■□□□ 1.68
PTPN18-202ENST00000347849 FAM89AQ96GI7 184 aa25.57■■□□□ 1.68
PTPN18-202ENST00000347849 FAM227BQ96M60 508 aa25.57■■□□□ 1.68
PTPN18-202ENST00000347849 RAD50Q92878 1312 aa25.57■■□□□ 1.68
PTPN18-202ENST00000347849 ZNF500O60304 480 aaPredicted RBP25.57■■□□□ 1.68
PTPN18-202ENST00000347849 MCCP23508 829 aa25.57■■□□□ 1.68
PTPN18-202ENST00000347849 DDB1Q16531 1140 aa25.57■■□□□ 1.68
PTPN18-202ENST00000347849 MARCH10Q8NA82 808 aaPredicted RBP25.57■■□□□ 1.68
PTPN18-202ENST00000347849 DBNDD2Q9BQY9 259 aa25.57■■□□□ 1.68
PTPN18-202ENST00000347849 CCDC9Q9Y3X0 531 aaKnown RBP25.57■■□□□ 1.68
PTPN18-202ENST00000347849 PTH1RQ03431 593 aa25.56■■□□□ 1.68
PTPN18-202ENST00000347849 CCDC85AQ96PX6 553 aaPredicted RBP25.56■■□□□ 1.68
PTPN18-202ENST00000347849 LRRC24Q50LG9 513 aa25.56■■□□□ 1.68
PTPN18-202ENST00000347849 RASEFQ8IZ41 740 aa25.56■■□□□ 1.68
PTPN18-202ENST00000347849 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.55■■□□□ 1.68
PTPN18-202ENST00000347849 GPTP24298 496 aa25.55■■□□□ 1.68
PTPN18-202ENST00000347849 NOL8Q76FK4 1167 aaKnown RBP25.55■■□□□ 1.68
PTPN18-202ENST00000347849 RNF214Q8ND24 703 aa25.55■■□□□ 1.68
PTPN18-202ENST00000347849 ANAPC15P60006 121 aa25.55■■□□□ 1.68
PTPN18-202ENST00000347849 KIF6Q6ZMV9 814 aa25.55■■□□□ 1.68
PTPN18-202ENST00000347849 PKNOX2Q96KN3 472 aa25.55■■□□□ 1.68
PTPN18-202ENST00000347849 NRAPQ86VF7 1730 aa25.54■■□□□ 1.68
PTPN18-202ENST00000347849 PUS3Q9BZE2 481 aaKnown RBP25.54■■□□□ 1.68
PTPN18-202ENST00000347849 CHGBP05060 677 aa25.54■■□□□ 1.68
PTPN18-202ENST00000347849 TERF1P54274 439 aa25.54■■□□□ 1.68
PTPN18-202ENST00000347849 ZKSCAN5Q9Y2L8 839 aa25.54■■□□□ 1.68
PTPN18-202ENST00000347849 MAP3K15Q6ZN16 1313 aa25.53■■□□□ 1.68
PTPN18-202ENST00000347849 SPATA31A5Q5VU36 1347 aa25.53■■□□□ 1.68
PTPN18-202ENST00000347849 SPATA31A7Q8IWB4 1347 aa25.53■■□□□ 1.68
PTPN18-202ENST00000347849 NMIQ13287 307 aaPredicted RBP25.53■■□□□ 1.68
PTPN18-202ENST00000347849 SNX14Q9Y5W7 946 aa25.53■■□□□ 1.68
PTPN18-202ENST00000347849 WNK3Q9BYP7 1800 aa25.52■■□□□ 1.68
PTPN18-202ENST00000347849 LRP6O75581 1613 aa25.52■■□□□ 1.68
PTPN18-202ENST00000347849 TOM1O60784 492 aa25.52■■□□□ 1.68
PTPN18-202ENST00000347849 IL17RAQ96F46 866 aa25.52■■□□□ 1.68
PTPN18-202ENST00000347849 GIGYF2Q6Y7W6 1299 aaKnown RBP25.52■■□□□ 1.68
PTPN18-202ENST00000347849 TBC1D2BQ9UPU7 963 aa25.52■■□□□ 1.68
PTPN18-202ENST00000347849 DOT1LQ8TEK3 1739 aa25.51■■□□□ 1.67
PTPN18-202ENST00000347849 A0A0D9SFI3 127 aa25.51■■□□□ 1.67
PTPN18-202ENST00000347849 MBD3O95983 291 aa25.51■■□□□ 1.67
PTPN18-202ENST00000347849 TIMM10P62072 90 aa25.51■■□□□ 1.67
PTPN18-202ENST00000347849 BRD1O95696 1058 aa25.51■■□□□ 1.67
PTPN18-202ENST00000347849 TRIM28Q13263 835 aaKnown RBP25.51■■□□□ 1.67
PTPN18-202ENST00000347849 FSD1Q9BTV5 496 aa25.51■■□□□ 1.67
PTPN18-202ENST00000347849 FOXD4L6Q3SYB3 417 aaPredicted RBP25.5■■□□□ 1.67
PTPN18-202ENST00000347849 FOXD4L3Q6VB84 417 aaPredicted RBP25.5■■□□□ 1.67
PTPN18-202ENST00000347849 THRAP3Q9Y2W1 955 aaKnown RBP25.5■■□□□ 1.67
PTPN18-202ENST00000347849 ATP5JP18859 108 aa25.49■■□□□ 1.67
PTPN18-202ENST00000347849 MCM2P49736 904 aa25.49■■□□□ 1.67
PTPN18-202ENST00000347849 FAM13BQ9NYF5 915 aa25.49■■□□□ 1.67
PTPN18-202ENST00000347849 EPB41L2O43491 1005 aaKnown RBP25.48■■□□□ 1.67
PTPN18-202ENST00000347849 CPA1P15085 419 aa25.48■■□□□ 1.67
PTPN18-202ENST00000347849 CDCA7Q9BWT1 371 aaPredicted RBP25.48■■□□□ 1.67
PTPN18-202ENST00000347849 CCDC39Q9UFE4 941 aa25.48■■□□□ 1.67
PTPN18-202ENST00000347849 NLRP10Q86W26 655 aa25.48■■□□□ 1.67
PTPN18-202ENST00000347849 RUFY2Q8WXA3 655 aa25.48■■□□□ 1.67
PTPN18-202ENST00000347849 NEUROD6Q96NK8 337 aa25.48■■□□□ 1.67
PTPN18-202ENST00000347849 SLIT2O94813 1529 aa25.48■■□□□ 1.67
PTPN18-202ENST00000347849 EYA2O00167 538 aa25.47■■□□□ 1.67
PTPN18-202ENST00000347849 CUL4AQ13619 759 aa25.47■■□□□ 1.67
PTPN18-202ENST00000347849 KCNQ2O43526 872 aa25.47■■□□□ 1.67
PTPN18-202ENST00000347849 PCCAP05165 728 aaPredicted RBP25.47■■□□□ 1.67
PTPN18-202ENST00000347849 ZBTB38Q8NAP3 1195 aaPredicted RBP25.47■■□□□ 1.67
PTPN18-202ENST00000347849 DNAJC2Q99543 621 aaKnown RBP25.47■■□□□ 1.67
PTPN18-202ENST00000347849 UBAP1LF5GYI3 381 aa25.46■■□□□ 1.67
PTPN18-202ENST00000347849 LARP6Q9BRS8 491 aaKnown RBP25.46■■□□□ 1.67
PTPN18-202ENST00000347849 UQCRHLA0A096LP55 91 aa25.46■■□□□ 1.67
PTPN18-202ENST00000347849 UQCRHP07919 91 aa25.46■■□□□ 1.67
PTPN18-202ENST00000347849 PRPF40BQ6NWY9 871 aaKnown RBP25.46■■□□□ 1.67
PTPN18-202ENST00000347849 MCM5P33992 734 aa25.45■■□□□ 1.67
PTPN18-202ENST00000347849 COL9A3Q14050 684 aaPredicted RBP25.45■■□□□ 1.67
PTPN18-202ENST00000347849 ZNF589Q86UQ0 364 aaPredicted RBP25.45■■□□□ 1.67
PTPN18-202ENST00000347849 IL15P40933 162 aaPredicted RBP25.45■■□□□ 1.66
PTPN18-202ENST00000347849 ADCK5Q3MIX3 580 aa25.45■■□□□ 1.66
PTPN18-202ENST00000347849 CCDC171Q6TFL3 1326 aa25.44■■□□□ 1.66
PTPN18-202ENST00000347849 FAM98CQ17RN3 349 aaKnown RBP25.44■■□□□ 1.66
PTPN18-202ENST00000347849 CSPP1Q1MSJ5 1256 aa25.44■■□□□ 1.66
PTPN18-202ENST00000347849 INTS5Q6P9B9 1019 aaKnown RBP25.44■■□□□ 1.66
PTPN18-202ENST00000347849 DDX46Q7L014 1031 aaKnown RBP25.44■■□□□ 1.66
PTPN18-202ENST00000347849 DZIP3Q86Y13 1208 aaKnown RBP25.44■■□□□ 1.66
PTPN18-202ENST00000347849 TSPY26PQ9H489 355 aa25.44■■□□□ 1.66
PTPN18-202ENST00000347849 GDPD2Q9HCC8 539 aa25.44■■□□□ 1.66
PTPN18-202ENST00000347849 ITPK1Q13572 414 aa25.44■■□□□ 1.66
PTPN18-202ENST00000347849 C8orf37Q96NL8 207 aa25.44■■□□□ 1.66
PTPN18-202ENST00000347849 ATP6V1AP38606 617 aa25.43■■□□□ 1.66
PTPN18-202ENST00000347849 CCDC57Q2TAC2 916 aa25.43■■□□□ 1.66
PTPN18-202ENST00000347849 SLFNL1Q499Z3 407 aa25.43■■□□□ 1.66
PTPN18-202ENST00000347849 INTS4Q96HW7 963 aaKnown RBP25.43■■□□□ 1.66
PTPN18-202ENST00000347849 UBN2Q6ZU65 1347 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms